RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 EGFRP00533 1210 aa21.12■□□□□ 0.97
SMARCD3-212ENST00000485610 IMMTQ16891 758 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-212ENST00000485610 RBM26Q5T8P6 1007 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-212ENST00000485610 ZNF70Q9UC06 446 aaPredicted RBP21.12■□□□□ 0.97
SMARCD3-212ENST00000485610 COL2A1P02458 1487 aaPredicted RBP21.12■□□□□ 0.97
SMARCD3-212ENST00000485610 SIPA1L1O43166 1804 aa21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 SLC27A2O14975 620 aa21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 ZKSCAN1P17029 563 aaPredicted RBP21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 ANAPC15P60006 121 aa21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 PICALMQ13492 652 aa21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 NBPF9Q3BBW0 867 aa21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 KCNB2Q92953 911 aa21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 DDX4Q9NQI0 724 aaKnown RBP21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 ADARB2Q9NS39 739 aaKnown RBP21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 MCM9Q9NXL9 1143 aa21.11■□□□□ 0.97
SMARCD3-212ENST00000485610 CLRN2A0PK11 232 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 CYP21A2P08686 494 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 CACNB3P54284 484 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 NFIAQ12857 509 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 FKBP1CQ5VVH2 108 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 AMOTL1Q8IY63 956 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 TRPM4Q8TD43 1214 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 HACL1Q9UJ83 578 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 PALD1Q9ULE6 856 aa21.1■□□□□ 0.97
SMARCD3-212ENST00000485610 SBK1Q52WX2 424 aa21.09■□□□□ 0.97
SMARCD3-212ENST00000485610 OSBPL5Q9H0X9 879 aaPredicted RBP21.09■□□□□ 0.97
SMARCD3-212ENST00000485610 IQCA1LA6NCM1 817 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 USP17L12C9JPN9 530 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 USP17L21D6R901 530 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 ZNF213O14771 459 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 ENTPD3O75355 529 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 HAND2P61296 217 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 CTR9Q6PD62 1173 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 VEZTQ9HBM0 779 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 FAM198AQ9UFP1 575 aa21.08■□□□□ 0.97
SMARCD3-212ENST00000485610 PPARAQ07869 468 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 TSGA10IPQ3SY00 556 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 IL17RAQ96F46 866 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 SAP30BPQ9UHR5 308 aaKnown RBP21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 SNX14Q9Y5W7 946 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 ROBO3Q96MS0 1386 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 MINDY4BA8MYZ0 360 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 TNFAIP1Q13829 316 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 KRT32Q14532 448 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 RASEFQ8IZ41 740 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 ANAPC4Q9UJX5 808 aa21.07■□□□□ 0.96
SMARCD3-212ENST00000485610 TCP10L2B9ZVM9 353 aa21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 POLR3DP05423 398 aaPredicted RBP21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 EPHX2P34913 555 aa21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 TCP10Q12799 353 aa21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 C12orf60Q5U649 245 aa21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 FAM83AQ86UY5 434 aa21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 NBPF3Q9H094 633 aa21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 TSHZ2Q9NRE2 1034 aa21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 ATRNL1Q5VV63 1379 aa21.06■□□□□ 0.96
SMARCD3-212ENST00000485610 CNTNAP1P78357 1384 aa21.05■□□□□ 0.96
SMARCD3-212ENST00000485610 CYP2D7A0A087X1C5 515 aa21.05■□□□□ 0.96
SMARCD3-212ENST00000485610 CYP2D6P10635 497 aa21.05■□□□□ 0.96
SMARCD3-212ENST00000485610 TNNI2P48788 182 aa21.05■□□□□ 0.96
SMARCD3-212ENST00000485610 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
SMARCD3-212ENST00000485610 DHX36Q9H2U1 1008 aaKnown RBP21.05■□□□□ 0.96
SMARCD3-212ENST00000485610 TAF6LQ9Y6J9 622 aa21.05■□□□□ 0.96
SMARCD3-212ENST00000485610 ASTN2O75129 1339 aaPredicted RBP21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 HLA-DOAP06340 250 aa21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 SLC3A2P08195 630 aaKnown RBP21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 HIRAP54198 1017 aaPredicted RBP21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 USP50Q70EL3 339 aaPredicted RBP21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 TTC6Q86TZ1 520 aa21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 APOBEC3FQ8IUX4 373 aaKnown RBP21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 FAM151AQ8WW52 585 aa21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 GGA3Q9NZ52 723 aa21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 PITPNM2Q9BZ72 1349 aa21.04■□□□□ 0.96
SMARCD3-212ENST00000485610 CTDSPL2Q05D32 466 aa21.03■□□□□ 0.96
SMARCD3-212ENST00000485610 SLC4A8Q2Y0W8 1093 aa21.03■□□□□ 0.96
SMARCD3-212ENST00000485610 STAG1Q8WVM7 1258 aa21.03■□□□□ 0.96
SMARCD3-212ENST00000485610 KIF2CQ99661 725 aa21.03■□□□□ 0.96
SMARCD3-212ENST00000485610 RNF41Q9H4P4 317 aaPredicted RBP21.03■□□□□ 0.96
SMARCD3-212ENST00000485610 TAF1DQ9H5J8 278 aaPredicted RBP21.03■□□□□ 0.96
SMARCD3-212ENST00000485610 E7EWF7 191 aa21.02■□□□□ 0.96
SMARCD3-212ENST00000485610 PCP11498 1178 aaKnown RBP21.02■□□□□ 0.96
SMARCD3-212ENST00000485610 AKNAD1Q5T1N1 836 aa21.02■□□□□ 0.96
SMARCD3-212ENST00000485610 ANGEL2Q5VTE6 544 aaKnown RBP21.02■□□□□ 0.96
SMARCD3-212ENST00000485610 STOX1Q6ZVD7 989 aa21.02■□□□□ 0.96
SMARCD3-212ENST00000485610 ZSCAN29Q8IWY8 852 aaPredicted RBP21.02■□□□□ 0.96
SMARCD3-212ENST00000485610 ZFPM1Q8IX07 1006 aa21.02■□□□□ 0.96
SMARCD3-212ENST00000485610 POTECB2RU33 542 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 PSMA5P28066 241 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 PLCD1P51178 756 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 JAKMIP1Q96N16 626 aaKnown RBP21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 TM6SF1Q9BZW5 370 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 EHD4Q9H223 541 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 DDTLA6NHG4 134 aaPredicted RBP21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 EVX2Q03828 476 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 RABEP1Q15276 862 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 MFSD6Q6ZSS7 791 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 SH3BP5LQ7L8J4 393 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 PNMA8AQ86V59 439 aaPredicted RBP21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 CNNM2Q9H8M5 875 aa21.01■□□□□ 0.95
SMARCD3-212ENST00000485610 TAOK2Q9UL54 1235 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms