RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 POLLQ9UGP5 575 aa7.97□□□□□ -1.13
SORT1-206ENST00000485149 LAMB1P07942 1786 aa7.97□□□□□ -1.13
SORT1-206ENST00000485149 NEFMP07197 916 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 CENPBP07199 599 aaPredicted RBP7.96□□□□□ -1.14
SORT1-206ENST00000485149 USP17L8P0C7I0 530 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 ZBTB48P10074 688 aaPredicted RBP7.96□□□□□ -1.14
SORT1-206ENST00000485149 HCLS1P14317 486 aaPredicted RBP7.96□□□□□ -1.14
SORT1-206ENST00000485149 VAMP1P23763 118 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 SP3Q02447 781 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 ARHGEF6Q15052 776 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 NFE2L2Q16236 605 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 PRAMEF18Q5VWM3 479 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 OTUD7BQ6GQQ9 843 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 B4GALNT3Q6L9W6 998 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 ZC3H12CQ9C0D7 883 aaKnown RBP7.96□□□□□ -1.14
SORT1-206ENST00000485149 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.96□□□□□ -1.14
SORT1-206ENST00000485149 SCAF8Q9UPN6 1271 aaKnown RBP7.96□□□□□ -1.14
SORT1-206ENST00000485149 CEP290O15078 2479 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 ERBB4Q15303 1308 aa7.96□□□□□ -1.14
SORT1-206ENST00000485149 IGF2BP3O00425 579 aaKnown RBP eCLIP7.95□□□□□ -1.14
SORT1-206ENST00000485149 HTATSF1O43719 755 aaKnown RBP7.95□□□□□ -1.14
SORT1-206ENST00000485149 ATG7O95352 703 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 TMPOP42166 694 aaKnown RBP7.95□□□□□ -1.14
SORT1-206ENST00000485149 GPSM2P81274 684 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 CRHR2Q13324 411 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 TAF7Q15545 349 aaPredicted RBP7.95□□□□□ -1.14
SORT1-206ENST00000485149 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 HSP90AB3PQ58FF7 597 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 LDLRAD1Q5T700 205 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 TBC1D16Q8TBP0 767 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 RUNDC1Q96C34 613 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 PNNQ9H307 717 aaKnown RBP7.95□□□□□ -1.14
SORT1-206ENST00000485149 SH3TC1Q8TE82 1336 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 SCN9AQ15858 1988 aa7.95□□□□□ -1.14
SORT1-206ENST00000485149 TAF1P21675 1872 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 SOX1O00570 391 aaPredicted RBP7.94□□□□□ -1.14
SORT1-206ENST00000485149 APAF1O14727 1248 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 NOP9Q86U38 636 aaKnown RBP7.94□□□□□ -1.14
SORT1-206ENST00000485149 PNISRQ8TF01 805 aaKnown RBP7.94□□□□□ -1.14
SORT1-206ENST00000485149 CELF1Q92879 486 aaKnown RBP7.94□□□□□ -1.14
SORT1-206ENST00000485149 FAM122AQ96E09 287 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 SLC10A4Q96EP9 437 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 GPATCH3Q96I76 525 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 GMLQ99445 158 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 HTATIP2Q9BUP3 242 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 MRS2Q9HD23 443 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 KLHL42Q9P2K6 505 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 TRMT112Q9UI30 125 aaKnown RBP7.94□□□□□ -1.14
SORT1-206ENST00000485149 ANGEL1Q9UNK9 670 aaKnown RBP7.94□□□□□ -1.14
SORT1-206ENST00000485149 SALL2Q9Y467 1007 aaPredicted RBP7.94□□□□□ -1.14
SORT1-206ENST00000485149 LAS1LQ9Y4W2 734 aaKnown RBP7.94□□□□□ -1.14
SORT1-206ENST00000485149 NR2E3Q9Y5X4 410 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 PTCH2Q9Y6C5 1203 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 MAPK8IP3Q9UPT6 1336 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 PSME4Q14997 1843 aa7.94□□□□□ -1.14
SORT1-206ENST00000485149 WTIPA6NIX2 430 aaPredicted RBP7.93□□□□□ -1.14
SORT1-206ENST00000485149 RNF40O75150 1001 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 RECKO95980 971 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 SSTR3P32745 418 aaPredicted RBP7.93□□□□□ -1.14
SORT1-206ENST00000485149 CLCN1P35523 988 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 PLA2G5P39877 138 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
SORT1-206ENST00000485149 PRKG1Q13976 671 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 NBPF9Q3BBW0 867 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 MYSM1Q5VVJ2 828 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 NLRP10Q86W26 655 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 FAM9BQ8IZU0 186 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 WNK4Q96J92 1243 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 PRM3Q9NNZ6 103 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 STXBP5LQ9Y2K9 1186 aa7.93□□□□□ -1.14
SORT1-206ENST00000485149 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
SORT1-206ENST00000485149 PALM3A6NDB9 673 aaPredicted RBP7.92□□□□□ -1.14
SORT1-206ENST00000485149 WNT10BO00744 389 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 MYCP01106 439 aaPredicted RBP7.92□□□□□ -1.14
SORT1-206ENST00000485149 EIF4A1P60842 406 aaKnown RBP7.92□□□□□ -1.14
SORT1-206ENST00000485149 CAP1Q01518 475 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 SF3B3Q15393 1217 aaKnown RBP7.92□□□□□ -1.14
SORT1-206ENST00000485149 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 KMT5BQ4FZB7 885 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 CCDC181Q5TID7 509 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 APOBEC3FQ8IUX4 373 aaKnown RBP7.92□□□□□ -1.14
SORT1-206ENST00000485149 OGFOD1Q8N543 542 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 NKX2-3Q8TAU0 364 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 MORC4Q8TE76 937 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 VTI1AQ96AJ9 217 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 NAP1L5Q96NT1 182 aaPredicted RBP7.92□□□□□ -1.14
SORT1-206ENST00000485149 METTL14Q9HCE5 456 aaKnown RBP7.92□□□□□ -1.14
SORT1-206ENST00000485149 UNC80Q8N2C7 3258 aa7.92□□□□□ -1.14
SORT1-206ENST00000485149 COL1A1P02452 1464 aaPredicted RBP7.92□□□□□ -1.14
SORT1-206ENST00000485149 LAMA3Q16787 3333 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 USP17L3A6NCW0 530 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 USP17L4A6NCW7 530 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 ZBTB7BO15156 539 aaPredicted RBP7.91□□□□□ -1.14
SORT1-206ENST00000485149 UFL1O94874 794 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 MAP4K4O95819 1239 aaPredicted RBP7.91□□□□□ -1.14
SORT1-206ENST00000485149 MMP14P50281 582 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 KCNC4Q03721 635 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 SPTY2D1Q68D10 685 aaPredicted RBP7.91□□□□□ -1.14
SORT1-206ENST00000485149 USP17L1Q7RTZ2 530 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms