RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-210	ENST00000484752	TAOK2	Q9UL54	1235 aa		13.75	□□□□□ -0.21
RFTN1-210	ENST00000484752	SBF1	O95248	1867 aa		13.75	□□□□□ -0.21
RFTN1-210	ENST00000484752	GLTPD2	A6NH11	291 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	MINDY4B	A8MYZ0	360 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	ST18	O60284	1047 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	ENTPD3	O75355	529 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	DDN	O94850	711 aa	Predicted RBP	13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	CYP21A2	P08686	494 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	PDE4B	Q07343	736 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	PPARA	Q07869	468 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	TSGA10IP	Q3SY00	556 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	SPDYE2	Q495Y8	402 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	FKBP1C	Q5VVH2	108 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	POTED	Q86YR6	584 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	PRMT6	Q96LA8	375 aa	Predicted RBP	13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	TRIM34	Q9BYJ4	488 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	TDRD3	Q9H7E2	651 aa	Known RBP	13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	SNX14	Q9Y5W7	946 aa		13.74	□□□□□ -0.21
RFTN1-210	ENST00000484752	USP17L12	C9JPN9	530 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	USP17L21	D6R901	530 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	WNT10B	O00744	389 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	FOXP2	O15409	715 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	WDHD1	O75717	1129 aa	Predicted RBP	13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	HAND2	P61296	217 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	RBM26	Q5T8P6	1007 aa	Known RBP	13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	CTR9	Q6PD62	1173 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	MFSD6	Q6ZSS7	791 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	NCOA7	Q8NI08	942 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	JAKMIP1	Q96N16	626 aa	Known RBP	13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	TM6SF1	Q9BZW5	370 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	KRT23	Q9C075	422 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	VEZT	Q9HBM0	779 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	ADARB2	Q9NS39	739 aa	Known RBP	13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	ZNF70	Q9UC06	446 aa	Predicted RBP	13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	HACL1	Q9UJ83	578 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	ANAPC4	Q9UJX5	808 aa		13.73	□□□□□ -0.21
RFTN1-210	ENST00000484752	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	BLOC1S2	Q6QNY1	142 aa		13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	STAG1	Q8WVM7	1258 aa		13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	IL17RA	Q96F46	866 aa		13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	ZBED3	Q96IU2	234 aa	Predicted RBP	13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	NEK1	Q96PY6	1258 aa		13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	TOMM22	Q9NS69	142 aa		13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	CYP46A1	Q9Y6A2	500 aa		13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	GOLGB1	Q14789	3259 aa	Known RBP	13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	COL2A1	P02458	1487 aa	Predicted RBP	13.72	□□□□□ -0.21
RFTN1-210	ENST00000484752	CLRN2	A0PK11	232 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752		E7EWF7	191 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	CAST	P20810	708 aa	Known RBP	13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	YY1	P25490	414 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	AKNAD1	Q5T1N1	836 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	C12orf60	Q5U649	245 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	SAMD7	Q7Z3H4	446 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	FAM83A	Q86UY5	434 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	HOOK2	Q96ED9	719 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	MKRN1	Q9UHC7	482 aa	Known RBP	13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	SAP30BP	Q9UHR5	308 aa	Known RBP	13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	PALD1	Q9ULE6	856 aa		13.71	□□□□□ -0.21
RFTN1-210	ENST00000484752	ROBO3	Q96MS0	1386 aa		13.71	□□□□□ -0.22
RFTN1-210	ENST00000484752	NAV1	Q8NEY1	1877 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	TCP10L2	B9ZVM9	353 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	FGD1	P98174	961 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	BECN1	Q14457	450 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	SART3	Q15020	963 aa	Known RBP	13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	NBPF9	Q3BBW0	867 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	USP50	Q70EL3	339 aa	Predicted RBP	13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	PNMA8A	Q86V59	439 aa	Predicted RBP	13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	RASEF	Q8IZ41	740 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	FAM151A	Q8WW52	585 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	ESR2	Q92731	530 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	MKNK2	Q9HBH9	465 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	PI4KB	Q9UBF8	816 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	SWAP70	Q9UH65	585 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	RBM19	Q9Y4C8	960 aa	Known RBP	13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	PCDHAC2	Q9Y5I4	1007 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	PPP2R3B	Q9Y5P8	575 aa		13.7	□□□□□ -0.22
RFTN1-210	ENST00000484752	ADAMTSL1	Q8N6G6	1762 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	MCM5	P33992	734 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	EPS15	P42566	896 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	MCM2	P49736	904 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	NEK4	P51957	841 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	CACNB3	P54284	484 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	CTDSPL2	Q05D32	466 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	TCP10	Q12799	353 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	NFIA	Q12857	509 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	ANKRD1	Q15327	319 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	RUFY3	Q7L099	469 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	EHD4	Q9H223	541 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	DDX4	Q9NQI0	724 aa	Known RBP	13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	DAXX	Q9UER7	740 aa	Predicted RBP	13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	SERPINB13	Q9UIV8	391 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	ATRNL1	Q5VV63	1379 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	LAMA4	Q16363	1823 aa		13.69	□□□□□ -0.22
RFTN1-210	ENST00000484752	WDR19	Q8NEZ3	1342 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	PITPNM2	Q9BZ72	1349 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms