RNA–Protein interactions for RNA: ENST00000484377.5

TMEM50B-209, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-209ENST00000484377 BICC1Q9H694 974 aaKnown RBP11.36□□□□□ -0.59
TMEM50B-209ENST00000484377 PIM2Q9P1W9 311 aa11.36□□□□□ -0.59
TMEM50B-209ENST00000484377 RTL9Q8NET4 1388 aa11.36□□□□□ -0.59
TMEM50B-209ENST00000484377 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 VAMP1P23763 118 aa11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 TTLL6Q8N841 843 aa11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 DCTN4Q9UJW0 460 aa11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 KIAA1024Q9UPX6 916 aa11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 COL4A5P29400 1685 aa11.35□□□□□ -0.59
TMEM50B-209ENST00000484377 SBF1O95248 1867 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 WTIPA6NIX2 430 aaPredicted RBP11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 SFI1A8K8P3 1242 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 TK2O00142 265 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 NFKBIEO00221 500 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 C21orf2O43822 256 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 APLP1P51693 650 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 OCLNQ16625 522 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 DALRD3Q5D0E6 543 aaKnown RBP11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 LMBR1LQ6UX01 489 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 GTF3C2Q8WUA4 911 aaPredicted RBP11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 SPSB2Q99619 263 aa11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 LRRFIP2Q9Y608 721 aaKnown RBP11.34□□□□□ -0.59
TMEM50B-209ENST00000484377 MAGEB6P1A0A0J9YX57 407 aa11.33□□□□□ -0.6
TMEM50B-209ENST00000484377 RFX5P48382 616 aaPredicted RBP11.33□□□□□ -0.6
TMEM50B-209ENST00000484377 USP4Q13107 963 aa11.33□□□□□ -0.6
TMEM50B-209ENST00000484377 GRAPQ13588 217 aa11.33□□□□□ -0.6
TMEM50B-209ENST00000484377 ITPRIPQ8IWB1 547 aa11.33□□□□□ -0.6
TMEM50B-209ENST00000484377 GRAPLQ8TC17 118 aaPredicted RBP11.33□□□□□ -0.6
TMEM50B-209ENST00000484377 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
TMEM50B-209ENST00000484377 PDZRN3Q9UPQ7 1066 aa11.33□□□□□ -0.6
TMEM50B-209ENST00000484377 UBTFL1P0CB47 393 aaPredicted RBP11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 FKBP4Q02790 459 aaKnown RBP eCLIP11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 RASSF7Q02833 373 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 MVPQ14764 893 aaKnown RBP11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 AGERQ15109 404 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 CCDC152Q4G0S7 254 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 FTSJ3Q8IY81 847 aaKnown RBP11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 KLHDC4Q8TBB5 520 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 CNKSR1Q969H4 720 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 DRC1Q96MC2 740 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 ASB16Q96NS5 453 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 CCDC88AQ3V6T2 1871 aa11.32□□□□□ -0.6
TMEM50B-209ENST00000484377 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
TMEM50B-209ENST00000484377 DKK1O94907 266 aa11.31□□□□□ -0.6
TMEM50B-209ENST00000484377 ITGA6P23229 1130 aa11.31□□□□□ -0.6
TMEM50B-209ENST00000484377 MMP16P51512 607 aa11.31□□□□□ -0.6
TMEM50B-209ENST00000484377 GPR162Q16538 588 aa11.31□□□□□ -0.6
TMEM50B-209ENST00000484377 DDX46Q7L014 1031 aaKnown RBP11.31□□□□□ -0.6
TMEM50B-209ENST00000484377 MKNK1Q9BUB5 465 aa11.31□□□□□ -0.6
TMEM50B-209ENST00000484377 ZBTB40Q9NUA8 1239 aa11.31□□□□□ -0.6
TMEM50B-209ENST00000484377 PNMA6EA0A0J9YXQ4 647 aa11.3□□□□□ -0.6
TMEM50B-209ENST00000484377 RPS8P62241 208 aaKnown RBP11.3□□□□□ -0.6
TMEM50B-209ENST00000484377 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
TMEM50B-209ENST00000484377 SH3BP5LQ7L8J4 393 aa11.3□□□□□ -0.6
TMEM50B-209ENST00000484377 SIRT2Q8IXJ6 389 aa11.3□□□□□ -0.6
TMEM50B-209ENST00000484377 PUS3Q9BZE2 481 aaKnown RBP11.3□□□□□ -0.6
TMEM50B-209ENST00000484377 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
TMEM50B-209ENST00000484377 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
TMEM50B-209ENST00000484377 ALDH1B1P30837 517 aa11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 GPSM2P81274 684 aa11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 MTX1Q13505 466 aa11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 FBXO33Q7Z6M2 555 aa11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 SREK1Q8WXA9 508 aaKnown RBP11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 GPR101Q96P66 508 aaPredicted RBP11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 CRBNQ96SW2 442 aa11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.29□□□□□ -0.6
TMEM50B-209ENST00000484377 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 SNAP23O00161 211 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 LGR5O75473 907 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 BBOX1O75936 387 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 GNAI3P08754 354 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 PTPN12Q05209 780 aaKnown RBP11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 SP8Q8IXZ3 490 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 SEPT3Q9UH03 358 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 PA2G4Q9UQ80 394 aaKnown RBP11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 CHMP3Q9Y3E7 222 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 IRS2Q9Y4H2 1338 aa11.28□□□□□ -0.6
TMEM50B-209ENST00000484377 CHD4Q14839 1912 aa11.27□□□□□ -0.6
TMEM50B-209ENST00000484377 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.6
TMEM50B-209ENST00000484377 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
TMEM50B-209ENST00000484377 GNAI2P04899 355 aa11.27□□□□□ -0.61
TMEM50B-209ENST00000484377 KLRK1P26718 216 aa11.27□□□□□ -0.61
TMEM50B-209ENST00000484377 IFIT5Q13325 482 aaKnown RBP11.27□□□□□ -0.61
TMEM50B-209ENST00000484377 TSNAXIP1Q2TAA8 658 aa11.27□□□□□ -0.61
TMEM50B-209ENST00000484377 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
TMEM50B-209ENST00000484377 ARHGAP27Q6ZUM4 889 aa11.27□□□□□ -0.61
TMEM50B-209ENST00000484377 ATG9AQ7Z3C6 839 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms