RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 PIP4K2BP78356 416 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 TMEM67Q5HYA8 995 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 MYSM1Q5VVJ2 828 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 APOA5Q6Q788 366 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 ILDR1Q86SU0 546 aaPredicted RBP8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 CCAR1Q8IX12 1150 aaKnown RBP8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 ARMT1Q9H993 441 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 LY9Q9HBG7 655 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 EPB41L4AQ9HCS5 686 aaPredicted RBP8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 GPHNQ9NQX3 736 aaPredicted RBP8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 COLQQ9Y215 455 aaPredicted RBP8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 SLC12A7Q9Y666 1083 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 SLC4A4Q9Y6R1 1079 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 SBF2Q86WG5 1849 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 DLEC1Q9Y238 1755 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 NEDD4P46934 1319 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 MAGEB6P1A0A0J9YX57 407 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 ERICH2A1L162 156 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 CCDC69A6NI79 296 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 GOLGA8AA7E2F4 631 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 IFIT3O14879 490 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 ZPR1O75312 459 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 CYP7A1P22680 504 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 HMGB2P26583 209 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 IARSP41252 1262 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 ME1P48163 572 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 RPS8P62241 208 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 KIF23Q02241 960 aaPredicted RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 TRIM29Q14134 588 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 STK38Q15208 465 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 SF3A1Q15459 793 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 NTRK3Q16288 839 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 CAMK4Q16566 473 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 NFXL1Q6ZNB6 911 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 FBXO33Q7Z6M2 555 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 VPS37DQ86XT2 251 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 LCORLQ8N3X6 602 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 JMYQ8N9B5 988 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 FSIP1Q8NA03 581 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 LINC00301Q8NCQ3 95 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 ENGASEQ8NFI3 743 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 TDRD7Q8NHU6 1098 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 C8orf37Q96NL8 207 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 ALG1Q9BT22 464 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 BRIP1Q9BX63 1249 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 TSPYL2Q9H2G4 693 aaPredicted RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 ZSWIM5Q9P217 1185 aa8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-206ENST00000484236 TAF1P21675 1872 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 UBAP1LF5GYI3 381 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 SPTLC2O15270 562 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 PPP6R2O75170 966 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 FMNL1O95466 1100 aaPredicted RBP8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 IFNAR1P17181 557 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 U2AF2P26368 475 aaKnown RBP eCLIP8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 GUCY1B3Q02153 619 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 PPARAQ07869 468 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 SSRP1Q08945 709 aaKnown RBP8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 KIAA2012Q0VF49 1180 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 WTAPQ15007 396 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 STX1AQ16623 288 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 TPRNQ4KMQ1 711 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 ANO6Q4KMQ2 910 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 ANO1Q5XXA6 986 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 TBC1D9BQ66K14 1250 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 NBPF5PQ86XG9 351 aaPredicted RBP8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 TRIM22Q8IYM9 498 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 ESR2Q92731 530 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 FAM84BQ96KN1 310 aaPredicted RBP8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 TIGD1Q96MW7 591 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 BCL2L12Q9HB09 334 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 ANO10Q9NW15 660 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 RAI14Q9P0K7 980 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 USP21Q9UK80 565 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 PCDHA7Q9UN72 937 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 TRPC6Q9Y210 931 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 LAMB1P07942 1786 aa8.57□□□□□ -1.04
SHROOM3-206ENST00000484236 DUOX1Q9NRD9 1551 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 MYH6P13533 1939 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 COL4A1P02462 1669 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 SNAP23O00161 211 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 FGRP09769 529 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 CMA1P23946 247 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 GYG1P46976 350 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 ZNF165P49910 485 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 FOSBP53539 338 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 CEBPZQ03701 1054 aaKnown RBP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 CTDSPL2Q05D32 466 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 SLC39A14Q15043 492 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 SAFBQ15424 915 aaKnown RBP eCLIP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 RTN1Q16799 776 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 SPTY2D1Q68D10 685 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms