RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 SCG3Q8WXD2 468 aaKnown RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 GTPBP3Q969Y2 492 aaKnown RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 LGR6Q9HBX8 967 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 NOS2P35228 1153 aa8.12□□□□□ -1.11
SEMA3D-204ENST00000484038 ZDHHC1Q8WTX9 485 aa8.12□□□□□ -1.11
SEMA3D-204ENST00000484038 ZNF622Q969S3 477 aaKnown RBP eCLIP8.12□□□□□ -1.11
SEMA3D-204ENST00000484038 GMCL1Q96IK5 515 aa8.12□□□□□ -1.11
SEMA3D-204ENST00000484038 TRERF1Q96PN7 1200 aa8.12□□□□□ -1.11
SEMA3D-204ENST00000484038 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
SEMA3D-204ENST00000484038 SCN7AQ01118 1682 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 COL11A2P13942 1736 aaPredicted RBP8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 RNMTO43148 476 aaKnown RBP8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 C21orf2O43822 256 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 HMOX1P09601 288 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 IL13P35225 146 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 TEAD4Q15561 434 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 C1orf216Q8TAB5 229 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 COL25A1Q9BXS0 654 aaPredicted RBP8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 UBR2Q8IWV8 1755 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 CACNA1SQ13698 1873 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 ANKRD31Q8N7Z5 1873 aa8.11□□□□□ -1.11
SEMA3D-204ENST00000484038 NPHP1O15259 732 aa8.1□□□□□ -1.11
SEMA3D-204ENST00000484038 ATP4AP20648 1035 aa8.1□□□□□ -1.11
SEMA3D-204ENST00000484038 TXLNAP40222 546 aa8.1□□□□□ -1.11
SEMA3D-204ENST00000484038 SH3PXD2AQ5TCZ1 1133 aa8.1□□□□□ -1.11
SEMA3D-204ENST00000484038 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
SEMA3D-204ENST00000484038 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
SEMA3D-204ENST00000484038 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
SEMA3D-204ENST00000484038 ZDHHC3Q9NYG2 299 aa8.1□□□□□ -1.11
SEMA3D-204ENST00000484038 PDE6BP35913 854 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 TBC1D9BQ66K14 1250 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 ZNF295-AS1Q8N0V1 137 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 TTC5Q8N0Z6 440 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 TAOK3Q9H2K8 898 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 ZMIZ1Q9ULJ6 1067 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 HCN4Q9Y3Q4 1203 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 KNSTRNQ9Y448 316 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 DICER1Q9UPY3 1922 aaKnown RBP8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 FER1L6Q2WGJ9 1857 aa8.09□□□□□ -1.11
SEMA3D-204ENST00000484038 A0A087WZG4 1122 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 WIPF1O43516 503 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 DDNO94850 711 aaPredicted RBP8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 ATG7O95352 703 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 STARD3NLO95772 234 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 HSPA5P11021 654 aaKnown RBP8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 MTHFSDQ2M296 383 aaKnown RBP8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 GAS2L2Q8NHY3 880 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 BRIP1Q9BX63 1249 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 NEUROD4Q9HD90 331 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 A0A1W2PNR3 127 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 EML1O00423 815 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 FOXN1O15353 648 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 EIF5P55010 431 aaKnown RBP8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 ELOAQ14241 798 aaKnown RBP8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 LBRQ14739 615 aaKnown RBP8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 PRR5LQ6MZQ0 368 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 NPM2Q86SE8 214 aaKnown RBP8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 CNBD1Q8NA66 436 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 VTI1AQ96AJ9 217 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 CRISPLD1Q9H336 500 aa8.08□□□□□ -1.12
SEMA3D-204ENST00000484038 CNTNAP1P78357 1384 aa8.07□□□□□ -1.12
SEMA3D-204ENST00000484038 LTBP3Q9NS15 1303 aa8.07□□□□□ -1.12
SEMA3D-204ENST00000484038 ST5P78524 1137 aa8.07□□□□□ -1.12
SEMA3D-204ENST00000484038 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
SEMA3D-204ENST00000484038 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
SEMA3D-204ENST00000484038 PRPF40BQ6NWY9 871 aaKnown RBP8.07□□□□□ -1.12
SEMA3D-204ENST00000484038 PHACTR1Q9C0D0 580 aa8.07□□□□□ -1.12
SEMA3D-204ENST00000484038 PHF24Q9UPV7 400 aa8.07□□□□□ -1.12
SEMA3D-204ENST00000484038 HEG1Q9ULI3 1381 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 SLX4Q8IY92 1834 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 IQCA1LA6NCM1 817 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 PRMT3O60678 531 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 THBS1P07996 1170 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 IGFBP4P22692 258 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 TEFQ10587 303 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 EAPPQ56P03 285 aaPredicted RBP8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 TMEM164Q5U3C3 297 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 FIGNL1Q6PIW4 674 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 ZNF496Q96IT1 587 aaPredicted RBP8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 SETDB2Q96T68 719 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 BCORQ6W2J9 1755 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 ARFGEF2Q9Y6D5 1785 aa8.06□□□□□ -1.12
SEMA3D-204ENST00000484038 DIAPH1O60610 1272 aaKnown RBP8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 SRGNP10124 158 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 KRT76Q01546 638 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 TRIM26Q12899 539 aaPredicted RBP8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 SWI5Q1ZZU3 235 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 SOGA3Q5TF21 947 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 STYK1Q6J9G0 422 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 ZNF790Q6PG37 636 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 LDHDQ86WU2 507 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 ZIC5Q96T25 663 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 C2orf49Q9BVC5 232 aaPredicted RBP8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 SIPA1L3O60292 1781 aaPredicted RBP8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 PASKQ96RG2 1323 aa8.05□□□□□ -1.12
SEMA3D-204ENST00000484038 SCN4AP35499 1836 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 DCDC2BA2VCK2 349 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms