RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DCAF8Q5TAQ9 597 aa30.82■■■□□ 2.52
SHOX2-204ENST00000483851 LARP1BQ659C4 914 aaKnown RBP30.82■■■□□ 2.52
SHOX2-204ENST00000483851 ESR2Q92731 530 aa30.82■■■□□ 2.52
SHOX2-204ENST00000483851 GZF1Q9H116 711 aaPredicted RBP30.82■■■□□ 2.52
SHOX2-204ENST00000483851 KLF18A0A0U1RQI7 1052 aa30.81■■■□□ 2.52
SHOX2-204ENST00000483851 DIXDC1Q155Q3 683 aa30.81■■■□□ 2.52
SHOX2-204ENST00000483851 TMTC2Q8N394 836 aa30.81■■■□□ 2.52
SHOX2-204ENST00000483851 MKRN1Q9UHC7 482 aaKnown RBP30.81■■■□□ 2.52
SHOX2-204ENST00000483851 TACC3Q9Y6A5 838 aa30.81■■■□□ 2.52
SHOX2-204ENST00000483851 USP17L12C9JPN9 530 aa30.8■■■□□ 2.52
SHOX2-204ENST00000483851 USP17L21D6R901 530 aa30.8■■■□□ 2.52
SHOX2-204ENST00000483851 FKBP1AP62942 108 aaKnown RBP30.8■■■□□ 2.52
SHOX2-204ENST00000483851 NSUN7Q8NE18 718 aaKnown RBP30.8■■■□□ 2.52
SHOX2-204ENST00000483851 MTMR6Q9Y217 621 aa30.8■■■□□ 2.52
SHOX2-204ENST00000483851 GPHNQ9NQX3 736 aaPredicted RBP30.79■■■□□ 2.52
SHOX2-204ENST00000483851 TMEM67Q5HYA8 995 aa30.78■■■□□ 2.52
SHOX2-204ENST00000483851 TTLL6Q8N841 843 aa30.78■■■□□ 2.52
SHOX2-204ENST00000483851 ORC4O43929 436 aa30.78■■■□□ 2.52
SHOX2-204ENST00000483851 F13A1P00488 732 aa30.78■■■□□ 2.52
SHOX2-204ENST00000483851 LY9Q9HBG7 655 aa30.78■■■□□ 2.52
SHOX2-204ENST00000483851 GOLGA6L3A6NEY3 463 aa30.77■■■□□ 2.52
SHOX2-204ENST00000483851 GOLGA8BA8MQT2 603 aa30.77■■■□□ 2.52
SHOX2-204ENST00000483851 IFIT3O14879 490 aaKnown RBP30.77■■■□□ 2.52
SHOX2-204ENST00000483851 USP5P45974 858 aa30.77■■■□□ 2.52
SHOX2-204ENST00000483851 AMOTL1Q8IY63 956 aa30.77■■■□□ 2.52
SHOX2-204ENST00000483851 SH3RF3Q8TEJ3 882 aaPredicted RBP30.77■■■□□ 2.52
SHOX2-204ENST00000483851 INCENPQ9NQS7 918 aa30.77■■■□□ 2.52
SHOX2-204ENST00000483851 TOMM22Q9NS69 142 aa30.77■■■□□ 2.52
SHOX2-204ENST00000483851 NAP1L2Q9ULW6 460 aaPredicted RBP30.77■■■□□ 2.52
SHOX2-204ENST00000483851 HPS5Q9UPZ3 1129 aa30.77■■■□□ 2.52
SHOX2-204ENST00000483851 ERICH2A1L162 156 aa30.76■■■□□ 2.52
SHOX2-204ENST00000483851 BTDP43251 543 aa30.76■■■□□ 2.52
SHOX2-204ENST00000483851 RCAN1P53805 252 aa30.76■■■□□ 2.52
SHOX2-204ENST00000483851 CCT2P78371 535 aaKnown RBP30.76■■■□□ 2.52
SHOX2-204ENST00000483851 DOK7Q18PE1 504 aa30.76■■■□□ 2.52
SHOX2-204ENST00000483851 MCTP1Q6DN14 999 aa30.76■■■□□ 2.52
SHOX2-204ENST00000483851 CTDNEP1O95476 244 aa30.76■■■□□ 2.51
SHOX2-204ENST00000483851 FAM184AQ8NB25 1140 aa30.76■■■□□ 2.51
SHOX2-204ENST00000483851 NKX2-3Q8TAU0 364 aa30.76■■■□□ 2.51
SHOX2-204ENST00000483851 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.76■■■□□ 2.51
SHOX2-204ENST00000483851 JAK2O60674 1132 aa30.75■■■□□ 2.51
SHOX2-204ENST00000483851 RRP12Q5JTH9 1297 aaKnown RBP30.75■■■□□ 2.51
SHOX2-204ENST00000483851 APOA5Q6Q788 366 aa30.75■■■□□ 2.51
SHOX2-204ENST00000483851 RGS22Q8NE09 1264 aa30.75■■■□□ 2.51
SHOX2-204ENST00000483851 MCM9Q9NXL9 1143 aa30.75■■■□□ 2.51
SHOX2-204ENST00000483851 ISY1Q9ULR0 285 aaKnown RBP30.75■■■□□ 2.51
SHOX2-204ENST00000483851 PTPDC1A2A3K4 754 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 KIAA2012Q0VF49 1180 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 STRIP1Q5VSL9 837 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 RTKN2Q8IZC4 609 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 MRIQ9BWK5 157 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 MTFR1LQ9H019 292 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 NID2Q14112 1375 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 ROBO3Q96MS0 1386 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 TGFB2P61812 414 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 PDE4BQ07343 736 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 C12orf60Q5U649 245 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 FOXD4L5Q5VV16 416 aaPredicted RBP30.74■■■□□ 2.51
SHOX2-204ENST00000483851 FOXD4L4Q8WXT5 416 aaPredicted RBP30.74■■■□□ 2.51
SHOX2-204ENST00000483851 UBAC1Q9BSL1 405 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 NAV1Q8NEY1 1877 aa30.74■■■□□ 2.51
SHOX2-204ENST00000483851 KLHL40Q2TBA0 621 aa30.73■■■□□ 2.51
SHOX2-204ENST00000483851 CCDC93Q567U6 631 aa30.73■■■□□ 2.51
SHOX2-204ENST00000483851 CDK5RAP2Q96SN8 1893 aa30.73■■■□□ 2.51
SHOX2-204ENST00000483851 CCDC69A6NI79 296 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 POLD1P28340 1107 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 WTAPQ15007 396 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 SYNE3Q6ZMZ3 975 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 NFXL1Q6ZNB6 911 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 CERS5Q8N5B7 392 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 NCOA5Q9HCD5 579 aaKnown RBP30.72■■■□□ 2.51
SHOX2-204ENST00000483851 LMBRD1Q9NUN5 540 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 VPS37CA5D8V6 355 aaPredicted RBP30.72■■■□□ 2.51
SHOX2-204ENST00000483851 ZBTB43O43298 467 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 XRCC6P12956 609 aaKnown RBP eCLIP30.72■■■□□ 2.51
SHOX2-204ENST00000483851 HHIPL2Q6UWX4 724 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 VPS33BQ9H267 617 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 SLC12A7Q9Y666 1083 aa30.72■■■□□ 2.51
SHOX2-204ENST00000483851 CYP2D7A0A087X1C5 515 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 CPLX1O14810 134 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 CDKL5O76039 1030 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 KCNA3P22001 575 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 METAP2P50579 478 aaKnown RBP eCLIP30.71■■■□□ 2.51
SHOX2-204ENST00000483851 RHBDL3P58872 404 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 SOGA3Q5TF21 947 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 CPLX2Q6PUV4 134 aaKnown RBP30.71■■■□□ 2.51
SHOX2-204ENST00000483851 IQCA1Q86XH1 822 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 PSMD1Q99460 953 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 DAGLAQ9Y4D2 1042 aa30.71■■■□□ 2.51
SHOX2-204ENST00000483851 ECE2O60344 883 aa30.7■■■□□ 2.51
SHOX2-204ENST00000483851 TEX11Q8IYF3 940 aa30.7■■■□□ 2.51
SHOX2-204ENST00000483851 TGFBRAP1Q8WUH2 860 aa30.7■■■□□ 2.51
SHOX2-204ENST00000483851 FBXW7Q969H0 707 aa30.7■■■□□ 2.51
SHOX2-204ENST00000483851 TTF2Q9UNY4 1162 aaKnown RBP30.7■■■□□ 2.51
SHOX2-204ENST00000483851 FOCADQ5VW36 1801 aa30.7■■■□□ 2.5
SHOX2-204ENST00000483851 DPEP1P16444 411 aa30.7■■■□□ 2.5
SHOX2-204ENST00000483851 DBNDD1Q9H9R9 158 aa30.7■■■□□ 2.5
SHOX2-204ENST00000483851 C21orf2O43822 256 aa30.69■■■□□ 2.5
SHOX2-204ENST00000483851 HDLBPQ00341 1268 aaKnown RBP30.69■■■□□ 2.5
SHOX2-204ENST00000483851 PPP2R5BQ15173 497 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms