RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 TNNI3KQ59H18 835 aa24.41■■□□□ 1.5
HPS4-213ENST00000483631 NSUN4Q96CB9 384 aaKnown RBP24.41■■□□□ 1.5
HPS4-213ENST00000483631 ZNF512BQ96KM6 892 aaPredicted RBP24.41■■□□□ 1.5
HPS4-213ENST00000483631 FPGT-TNNI3KV9GXZ4 949 aa24.41■■□□□ 1.5
HPS4-213ENST00000483631 PDE4DIPQ5VU43 2346 aa24.41■■□□□ 1.5
HPS4-213ENST00000483631 OS9Q13438 667 aaPredicted RBP24.4■■□□□ 1.5
HPS4-213ENST00000483631 CCDC158Q5M9N0 1113 aa24.4■■□□□ 1.5
HPS4-213ENST00000483631 ZFPM1Q8IX07 1006 aa24.4■■□□□ 1.5
HPS4-213ENST00000483631 ZNF384Q8TF68 577 aa24.4■■□□□ 1.5
HPS4-213ENST00000483631 COL2A1P02458 1487 aaPredicted RBP24.39■■□□□ 1.5
HPS4-213ENST00000483631 RHBDL3P58872 404 aa24.39■■□□□ 1.49
HPS4-213ENST00000483631 EFCC1Q9HA90 598 aa24.39■■□□□ 1.49
HPS4-213ENST00000483631 MAST2Q6P0Q8 1798 aa24.39■■□□□ 1.49
HPS4-213ENST00000483631 PHF20L1A8MW92 1017 aa24.38■■□□□ 1.49
HPS4-213ENST00000483631 BTBD19C9JJ37 291 aa24.38■■□□□ 1.49
HPS4-213ENST00000483631 TLR2O60603 784 aa24.38■■□□□ 1.49
HPS4-213ENST00000483631 SOX10P56693 466 aa24.38■■□□□ 1.49
HPS4-213ENST00000483631 PI16Q6UXB8 463 aa24.38■■□□□ 1.49
HPS4-213ENST00000483631 CD99L2Q8TCZ2 262 aa24.38■■□□□ 1.49
HPS4-213ENST00000483631 C1orf115Q9H7X2 142 aa24.38■■□□□ 1.49
HPS4-213ENST00000483631 CXCL11O14625 94 aa24.37■■□□□ 1.49
HPS4-213ENST00000483631 TTC39AQ5SRH9 613 aa24.37■■□□□ 1.49
HPS4-213ENST00000483631 SH3BP5LQ7L8J4 393 aa24.37■■□□□ 1.49
HPS4-213ENST00000483631 ANKRD23Q86SG2 305 aa24.37■■□□□ 1.49
HPS4-213ENST00000483631 ZSCAN29Q8IWY8 852 aaPredicted RBP24.37■■□□□ 1.49
HPS4-213ENST00000483631 DDX4Q9NQI0 724 aaKnown RBP24.37■■□□□ 1.49
HPS4-213ENST00000483631 RAI14Q9P0K7 980 aa24.37■■□□□ 1.49
HPS4-213ENST00000483631 PTPN22Q9Y2R2 807 aa24.37■■□□□ 1.49
HPS4-213ENST00000483631 TBC1D12O60347 775 aa24.36■■□□□ 1.49
HPS4-213ENST00000483631 CEP85Q6P2H3 762 aa24.36■■□□□ 1.49
HPS4-213ENST00000483631 TBC1D9Q6ZT07 1266 aa24.36■■□□□ 1.49
HPS4-213ENST00000483631 SCYL3Q8IZE3 742 aa24.36■■□□□ 1.49
HPS4-213ENST00000483631 DBNDD2Q9BQY9 259 aa24.36■■□□□ 1.49
HPS4-213ENST00000483631 LRP2BPQ9P2M1 347 aa24.36■■□□□ 1.49
HPS4-213ENST00000483631 DOCK1Q14185 1865 aa24.35■■□□□ 1.49
HPS4-213ENST00000483631 DDTLA6NHG4 134 aaPredicted RBP24.35■■□□□ 1.49
HPS4-213ENST00000483631 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.35■■□□□ 1.49
HPS4-213ENST00000483631 CTNND1O60716 968 aaKnown RBP24.34■■□□□ 1.49
HPS4-213ENST00000483631 ERC1Q8IUD2 1116 aa24.34■■□□□ 1.49
HPS4-213ENST00000483631 PICK1Q9NRD5 415 aa24.34■■□□□ 1.49
HPS4-213ENST00000483631 GNRH1P01148 92 aa24.33■■□□□ 1.49
HPS4-213ENST00000483631 PLCG2P16885 1265 aa24.33■■□□□ 1.49
HPS4-213ENST00000483631 PICALMQ13492 652 aa24.33■■□□□ 1.49
HPS4-213ENST00000483631 NOL10Q9BSC4 688 aaKnown RBP24.33■■□□□ 1.49
HPS4-213ENST00000483631 PTPRFP10586 1907 aa24.33■■□□□ 1.49
HPS4-213ENST00000483631 RBBP6Q7Z6E9 1792 aaKnown RBP24.32■■□□□ 1.48
HPS4-213ENST00000483631 BAG3O95817 575 aa24.32■■□□□ 1.48
HPS4-213ENST00000483631 HSP90AB4PQ58FF6 505 aa24.32■■□□□ 1.48
HPS4-213ENST00000483631 PANK1Q8TE04 598 aa24.32■■□□□ 1.48
HPS4-213ENST00000483631 ARMC5Q96C12 935 aa24.32■■□□□ 1.48
HPS4-213ENST00000483631 DBNLQ9UJU6 430 aaKnown RBP24.32■■□□□ 1.48
HPS4-213ENST00000483631 KIAA0100Q14667 2235 aaKnown RBP24.32■■□□□ 1.48
HPS4-213ENST00000483631 PHIPQ8WWQ0 1821 aa24.31■■□□□ 1.48
HPS4-213ENST00000483631 CYP2E1P05181 493 aaPredicted RBP24.31■■□□□ 1.48
HPS4-213ENST00000483631 PTPRAP18433 802 aa24.31■■□□□ 1.48
HPS4-213ENST00000483631 PPP4CP60510 307 aa24.31■■□□□ 1.48
HPS4-213ENST00000483631 MOGSQ13724 837 aa24.31■■□□□ 1.48
HPS4-213ENST00000483631 KIF22Q14807 665 aa24.31■■□□□ 1.48
HPS4-213ENST00000483631 NAA16Q6N069 864 aaPredicted RBP24.31■■□□□ 1.48
HPS4-213ENST00000483631 TMED8Q6PL24 325 aaPredicted RBP24.31■■□□□ 1.48
HPS4-213ENST00000483631 C17orf99Q6UX52 265 aa24.31■■□□□ 1.48
HPS4-213ENST00000483631 OSBPL5Q9H0X9 879 aaPredicted RBP24.31■■□□□ 1.48
HPS4-213ENST00000483631 FOCADQ5VW36 1801 aa24.31■■□□□ 1.48
HPS4-213ENST00000483631 MYO5AQ9Y4I1 1855 aaKnown RBP24.3■■□□□ 1.48
HPS4-213ENST00000483631 PDHXO00330 501 aa24.3■■□□□ 1.48
HPS4-213ENST00000483631 LACTBP83111 547 aaPredicted RBP24.3■■□□□ 1.48
HPS4-213ENST00000483631 FASTKD5Q7L8L6 764 aaKnown RBP24.3■■□□□ 1.48
HPS4-213ENST00000483631 EAF2Q96CJ1 260 aaPredicted RBP24.3■■□□□ 1.48
HPS4-213ENST00000483631 CHMP4BQ9H444 224 aaKnown RBP24.3■■□□□ 1.48
HPS4-213ENST00000483631 AFG3L2Q9Y4W6 797 aa24.3■■□□□ 1.48
HPS4-213ENST00000483631 HTTP42858 3142 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 A0A0G2JLL6 359 aaPredicted RBP24.29■■□□□ 1.48
HPS4-213ENST00000483631 PRMT2P55345 433 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 CAP1Q01518 475 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 PRRT2Q7Z6L0 340 aaPredicted RBP24.29■■□□□ 1.48
HPS4-213ENST00000483631 TEX11Q8IYF3 940 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 DHX36Q9H2U1 1008 aaKnown RBP24.29■■□□□ 1.48
HPS4-213ENST00000483631 SNRKQ9NRH2 765 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 DDX19BQ9UMR2 479 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 SLC45A1Q9Y2W3 748 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 ZHX2Q9Y6X8 837 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 CDK5RAP2Q96SN8 1893 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 ADGRA2Q96PE1 1338 aa24.29■■□□□ 1.48
HPS4-213ENST00000483631 CERS3Q8IU89 383 aa24.28■■□□□ 1.48
HPS4-213ENST00000483631 RPAP2Q8IXW5 612 aaPredicted RBP24.28■■□□□ 1.48
HPS4-213ENST00000483631 PARK7Q99497 189 aaKnown RBP24.28■■□□□ 1.48
HPS4-213ENST00000483631 TBC1D2Q9BYX2 928 aa24.28■■□□□ 1.48
HPS4-213ENST00000483631 HERC5Q9UII4 1024 aaKnown RBP24.28■■□□□ 1.48
HPS4-213ENST00000483631 TNRC18O15417 2968 aaPredicted RBP24.27■■□□□ 1.48
HPS4-213ENST00000483631 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.27■■□□□ 1.48
HPS4-213ENST00000483631 ZAP70P43403 619 aa24.26■■□□□ 1.47
HPS4-213ENST00000483631 GPAT2Q6NUI2 795 aa24.26■■□□□ 1.47
HPS4-213ENST00000483631 CCDC8Q9H0W5 538 aaPredicted RBP24.26■■□□□ 1.47
HPS4-213ENST00000483631 PI4KBQ9UBF8 816 aa24.26■■□□□ 1.47
HPS4-213ENST00000483631 ATAD5Q96QE3 1844 aa24.26■■□□□ 1.47
HPS4-213ENST00000483631 HMMRO75330 724 aa24.25■■□□□ 1.47
HPS4-213ENST00000483631 NBPF11Q86T75 865 aa24.25■■□□□ 1.47
HPS4-213ENST00000483631 SH3RF3Q8TEJ3 882 aaPredicted RBP24.25■■□□□ 1.47
HPS4-213ENST00000483631 ZBTB40Q9NUA8 1239 aa24.25■■□□□ 1.47
HPS4-213ENST00000483631 AATFQ9NY61 560 aaKnown RBP eCLIP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms