RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 UPF1Q92900 1129 aaKnown RBP eCLIP14.36□□□□□ -0.11
LINC00477-201ENST00000483544 NBPF3Q9H094 633 aa14.36□□□□□ -0.11
LINC00477-201ENST00000483544 NCOA5Q9HCD5 579 aaKnown RBP14.36□□□□□ -0.11
LINC00477-201ENST00000483544 ANGEL1Q9UNK9 670 aaKnown RBP14.36□□□□□ -0.11
LINC00477-201ENST00000483544 RTL9Q8NET4 1388 aa14.36□□□□□ -0.11
LINC00477-201ENST00000483544 TIAM2Q8IVF5 1701 aa14.36□□□□□ -0.11
LINC00477-201ENST00000483544 ATP6V1AP38606 617 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 SCARF1Q14162 830 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 CEP57L1Q8IYX8 460 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 ZNF34Q8IZ26 560 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 LINC00301Q8NCQ3 95 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 CEP89Q96ST8 783 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 BPIFA3Q9BQP9 254 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 NOL10Q9BSC4 688 aaKnown RBP14.35□□□□□ -0.11
LINC00477-201ENST00000483544 PUS7LQ9H0K6 701 aaKnown RBP14.35□□□□□ -0.11
LINC00477-201ENST00000483544 DNAJC25Q9H1X3 360 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 GREM2Q9H772 168 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 TRMT112Q9UI30 125 aaKnown RBP14.35□□□□□ -0.11
LINC00477-201ENST00000483544 HPS5Q9UPZ3 1129 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 SMTNL1A8MU46 457 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 DTNBO60941 627 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 SLC5A1P13866 664 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 FGFR2P21802 821 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 STK38Q15208 465 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 SYNE3Q6ZMZ3 975 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 FMR1NBQ8N0W7 255 aaPredicted RBP14.35□□□□□ -0.11
LINC00477-201ENST00000483544 KCNF1Q9H3M0 494 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 CNNM2Q9H8M5 875 aa14.35□□□□□ -0.11
LINC00477-201ENST00000483544 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
LINC00477-201ENST00000483544 NID2Q14112 1375 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 MYO5AQ9Y4I1 1855 aaKnown RBP14.34□□□□□ -0.11
LINC00477-201ENST00000483544 EXOC5O00471 708 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 GNAT2P19087 354 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 ANTXR2P58335 489 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
LINC00477-201ENST00000483544 HLFQ16534 295 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 TMEM132AQ24JP5 1023 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 PARP10Q53GL7 1025 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 SLC9C2Q5TAH2 1124 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 MYSM1Q5VVJ2 828 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 DRC7Q8IY82 874 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 STK36Q9NRP7 1315 aa14.34□□□□□ -0.11
LINC00477-201ENST00000483544 BECN2A8MW95 431 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 SPTLC2O15270 562 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 RCAN1P53805 252 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 RBM6P78332 1123 aaKnown RBP14.33□□□□□ -0.12
LINC00477-201ENST00000483544 MAP3K12Q12852 859 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 ZRSR1Q15695 479 aaKnown RBP14.33□□□□□ -0.12
LINC00477-201ENST00000483544 TEX35Q5T0J7 233 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 SGMS1Q86VZ5 419 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
LINC00477-201ENST00000483544 SPC24Q8NBT2 197 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 WASF1Q92558 559 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 GOLPH3LQ9H4A5 285 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 BTG4Q9NY30 223 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 PCDHA7Q9UN72 937 aa14.33□□□□□ -0.12
LINC00477-201ENST00000483544 AHDC1Q5TGY3 1603 aaPredicted RBP14.33□□□□□ -0.12
LINC00477-201ENST00000483544 A0A0G2JLW4 131 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 SH2B2O14492 632 aaPredicted RBP14.32□□□□□ -0.12
LINC00477-201ENST00000483544 PHLPP1O60346 1717 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 PDE6AP16499 860 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 CMA1P23946 247 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 LIFRP42702 1097 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 TPM4P67936 248 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 TTC31Q49AM3 519 aaPredicted RBP14.32□□□□□ -0.12
LINC00477-201ENST00000483544 CCDC102BQ68D86 513 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 IQUBQ8NA54 791 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 DOT1LQ8TEK3 1739 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 ZNF446Q9NWS9 450 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 CLIP2Q9UDT6 1046 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 PAXBP1Q9Y5B6 917 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 PPP6R2O75170 966 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 METAP2P50579 478 aaKnown RBP eCLIP14.32□□□□□ -0.12
LINC00477-201ENST00000483544 HAND2P61296 217 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 KIF23Q02241 960 aaPredicted RBP14.32□□□□□ -0.12
LINC00477-201ENST00000483544 CEBPZQ03701 1054 aaKnown RBP14.32□□□□□ -0.12
LINC00477-201ENST00000483544 ANO1Q5XXA6 986 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 CHST3Q7LGC8 479 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 CCDC186Q7Z3E2 898 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 KRT23Q9C075 422 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 IMPACTQ9P2X3 320 aa14.32□□□□□ -0.12
LINC00477-201ENST00000483544 THRAP3Q9Y2W1 955 aaKnown RBP14.32□□□□□ -0.12
LINC00477-201ENST00000483544 ZNF831Q5JPB2 1677 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 ZNF532Q9HCE3 1301 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 MYO1BO43795 1136 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 PTGS1P23219 599 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 GPTP24298 496 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 GSDMDP57764 484 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 MCTP2Q6DN12 878 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
LINC00477-201ENST00000483544 TMTC2Q8N394 836 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 STRBPQ96SI9 672 aaKnown RBP14.31□□□□□ -0.12
LINC00477-201ENST00000483544 SDF4Q9BRK5 362 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 PIH1D3Q9NQM4 214 aaKnown RBP14.31□□□□□ -0.12
LINC00477-201ENST00000483544 KCND1Q9NSA2 647 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 KIAA1468Q9P260 1216 aa14.31□□□□□ -0.12
LINC00477-201ENST00000483544 PYCARDQ9ULZ3 195 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms