RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 KIF4BQ2VIQ3 1234 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 CCDC152Q4G0S7 254 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 RGMBQ6NW40 437 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 USP17L2Q6R6M4 530 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 USP17L1Q7RTZ2 530 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 ADAM32Q8TC27 787 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 MCOLN1Q9GZU1 580 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 MBIPQ9NS73 344 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 GGA1Q9UJY5 639 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 ADAMTS8Q9UP79 889 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 USP17L5A8MUK1 530 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 ADM5C9JUS6 153 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-207ENST00000483407 PDE8AO60658 829 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 DDX58O95786 925 aaKnown RBP7.55□□□□□ -1.2
CSDE1-207ENST00000483407 EGFRP00533 1210 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 VIL1P09327 827 aaKnown RBP7.55□□□□□ -1.2
CSDE1-207ENST00000483407 RGS19P49795 217 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 ZNF157P51786 506 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-207ENST00000483407 GNAI1P63096 354 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 DGKZQ13574 1117 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 SLFNL1Q499Z3 407 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 CCDC191Q8NCU4 936 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 MYD88Q99836 296 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 IFT57Q9NWB7 429 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 SAGE1Q9NXZ1 904 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 GGA3Q9NZ52 723 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 PCDHB9Q9Y5E1 797 aa7.55□□□□□ -1.2
CSDE1-207ENST00000483407 DUOX1Q9NRD9 1551 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 CARNS1A5YM72 827 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 PCCAP05165 728 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-207ENST00000483407 KIF23Q02241 960 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-207ENST00000483407 KCNA1Q09470 495 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 CCDC30Q5VVM6 783 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 ANKRD18AQ8IVF6 992 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 AGBL3Q8NEM8 1001 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 ZIC5Q96T25 663 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 CDC5LQ99459 802 aaKnown RBP7.54□□□□□ -1.2
CSDE1-207ENST00000483407 PHAXQ9H814 394 aaKnown RBP7.54□□□□□ -1.2
CSDE1-207ENST00000483407 SEC31BQ9NQW1 1179 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 KCNQ5Q9NR82 932 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 CWC25Q9NXE8 425 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-207ENST00000483407 RTL9Q8NET4 1388 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 ANKRD36CQ5JPF3 1778 aa7.54□□□□□ -1.2
CSDE1-207ENST00000483407 XDHP47989 1333 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 TRPM7Q96QT4 1865 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 FAM155AB1AL88 458 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-207ENST00000483407 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-207ENST00000483407 APAF1O14727 1248 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 ZNF853P0CG23 659 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 ATP2B4P23634 1241 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 ZNF280AP59817 542 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-207ENST00000483407 FKBP1BP68106 108 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 MAP7D1Q3KQU3 841 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 DLK2Q6UY11 383 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 PODNQ7Z5L7 613 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 RNF135Q8IUD6 432 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 CDCA5Q96FF9 252 aa7.53□□□□□ -1.2
CSDE1-207ENST00000483407 CCDC85AQ96PX6 553 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-207ENST00000483407 LRRC37AA6NMS7 1700 aa7.52□□□□□ -1.2
CSDE1-207ENST00000483407 FAM196BA6NMK8 535 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 LCE2BO14633 110 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 TRPA1O75762 1119 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 CTSWP56202 376 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 NEXNQ0ZGT2 675 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 SCARF1Q14162 830 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 ANGEL2Q5VTE6 544 aaKnown RBP7.52□□□□□ -1.21
CSDE1-207ENST00000483407 OGFOD1Q8N543 542 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 PLPP7Q8NBV4 271 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 BAP1Q92560 729 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 METTL22Q9BUU2 404 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-207ENST00000483407 MYOZ2Q9NPC6 264 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 RNF186Q9NXI6 227 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 ZMIZ1Q9ULJ6 1067 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 ZNF609O15014 1411 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 ASTN2O75129 1339 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-207ENST00000483407 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.21
CSDE1-207ENST00000483407 GFRA3O60609 400 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 S1PR4O95977 384 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 NF2P35240 595 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 NCOA4Q13772 614 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 BPHLQ86WA6 291 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-207ENST00000483407 DEPDC4Q8N2C3 294 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 C8orf58Q8NAV2 365 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 NKX2-3Q8TAU0 364 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-207ENST00000483407 CSRNP1Q96S65 589 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 STK31Q9BXU1 1019 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 GZF1Q9H116 711 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-207ENST00000483407 PRKRIP1Q9H875 184 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-207ENST00000483407 BSDC1Q9NW68 430 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-207ENST00000483407 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
CSDE1-207ENST00000483407 MAP3K2Q9Y2U5 619 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 LAMB2P55268 1798 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 MYO3BQ8WXR4 1341 aa7.51□□□□□ -1.21
CSDE1-207ENST00000483407 DDX60Q8IY21 1712 aaKnown RBP7.5□□□□□ -1.21
CSDE1-207ENST00000483407 MED23Q9ULK4 1368 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 PI4KAP2A4QPH2 592 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms