RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 HCLS1P14317 486 aaPredicted RBP6.1□□□□□ -1.43
LAPTM4A-202ENST00000483117 TTLL4Q14679 1199 aa6.1□□□□□ -1.43
LAPTM4A-202ENST00000483117 COL19A1Q14993 1142 aa6.1□□□□□ -1.43
LAPTM4A-202ENST00000483117 SMYD4Q8IYR2 804 aaPredicted RBP6.1□□□□□ -1.43
LAPTM4A-202ENST00000483117 SETDB2Q96T68 719 aa6.1□□□□□ -1.43
LAPTM4A-202ENST00000483117 ARNTP27540 789 aa6.09□□□□□ -1.43
LAPTM4A-202ENST00000483117 ZNF574Q6ZN55 896 aaPredicted RBP6.09□□□□□ -1.43
LAPTM4A-202ENST00000483117 PAK6Q9NQU5 681 aaPredicted RBP6.09□□□□□ -1.43
LAPTM4A-202ENST00000483117 NEFMP07197 916 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 MAPK8P45983 427 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 CYP27C1Q4G0S4 372 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 MAP1SQ66K74 1059 aaPredicted RBP6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 MPRIPQ6WCQ1 1025 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 CBLL1Q75N03 491 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 FAM181AQ8N9Y4 354 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 C3orf58Q8NDZ4 430 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 GPBAR1Q8TDU6 330 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 CBX8Q9HC52 389 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 U3KQE9 123 aa6.08□□□□□ -1.44
LAPTM4A-202ENST00000483117 LEFTY1O75610 366 aa6.07□□□□□ -1.44
LAPTM4A-202ENST00000483117 NME2P22392 152 aa6.07□□□□□ -1.44
LAPTM4A-202ENST00000483117 TPTE2Q6XPS3 522 aa6.07□□□□□ -1.44
LAPTM4A-202ENST00000483117 WFDC3Q8IUB2 231 aa6.07□□□□□ -1.44
LAPTM4A-202ENST00000483117 BCL7CQ8WUZ0 217 aaPredicted RBP6.07□□□□□ -1.44
LAPTM4A-202ENST00000483117 ISL2Q96A47 359 aa6.07□□□□□ -1.44
LAPTM4A-202ENST00000483117 WWC3Q9ULE0 1092 aa6.07□□□□□ -1.44
LAPTM4A-202ENST00000483117 IVNS1ABPQ9Y6Y0 642 aa6.07□□□□□ -1.44
LAPTM4A-202ENST00000483117 FBXO24O75426 580 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 PAGE1O75459 146 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 HNRNPUQ00839 825 aaKnown RBP eCLIP6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 ZNF252P-AS1Q0IIN9 211 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 BNIP3Q12983 259 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 ZC3H12AQ5D1E8 599 aaKnown RBP6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 SPRED2Q7Z698 418 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 PLD6Q8N2A8 252 aaKnown RBP6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 GRIN3AQ8TCU5 1115 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 NECAB3Q96P71 396 aaPredicted RBP6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 EMILIN2Q9BXX0 1053 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 OSBPL7Q9BZF2 842 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 PCOLCE2Q9UKZ9 415 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 CSADQ9Y600 493 aa6.06□□□□□ -1.44
LAPTM4A-202ENST00000483117 ENC1O14682 589 aa6.05□□□□□ -1.44
LAPTM4A-202ENST00000483117 BMP6P22004 513 aa6.05□□□□□ -1.44
LAPTM4A-202ENST00000483117 FMR1Q06787 632 aaKnown RBP eCLIP6.05□□□□□ -1.44
LAPTM4A-202ENST00000483117 AGBL5Q8NDL9 886 aa6.05□□□□□ -1.44
LAPTM4A-202ENST00000483117 ACSBG1Q96GR2 724 aa6.05□□□□□ -1.44
LAPTM4A-202ENST00000483117 DUSP23Q9BVJ7 150 aa6.05□□□□□ -1.44
LAPTM4A-202ENST00000483117 SSU72Q9NP77 194 aaKnown RBP6.05□□□□□ -1.44
LAPTM4A-202ENST00000483117 SLC5A6Q9Y289 635 aa6.05□□□□□ -1.44
LAPTM4A-202ENST00000483117 GSTT1P30711 240 aa6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 ERVK-24P63145 666 aa6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 PPM1JQ5JR12 505 aa6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 ZSCAN29Q8IWY8 852 aaPredicted RBP6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 TOP6BLQ8N6T0 577 aa6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 RNF214Q8ND24 703 aa6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 NETO1Q8TDF5 533 aa6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 FBF1Q8TES7 1133 aa6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 CACNA2D2Q9NY47 1150 aa6.04□□□□□ -1.44
LAPTM4A-202ENST00000483117 DCDC2CA8MYV0 355 aa6.03□□□□□ -1.44
LAPTM4A-202ENST00000483117 CD96P40200 585 aa6.03□□□□□ -1.44
LAPTM4A-202ENST00000483117 PLCL1Q15111 1095 aa6.03□□□□□ -1.44
LAPTM4A-202ENST00000483117 RASIP1Q5U651 963 aa6.03□□□□□ -1.44
LAPTM4A-202ENST00000483117 UBE3DQ7Z6J8 389 aa6.03□□□□□ -1.44
LAPTM4A-202ENST00000483117 ASB16Q96NS5 453 aa6.03□□□□□ -1.44
LAPTM4A-202ENST00000483117 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
LAPTM4A-202ENST00000483117 CD8BP10966 210 aa6.02□□□□□ -1.45
LAPTM4A-202ENST00000483117 ITGB5P18084 799 aa6.02□□□□□ -1.45
LAPTM4A-202ENST00000483117 ALG1LQ6GMV1 187 aa6.02□□□□□ -1.45
LAPTM4A-202ENST00000483117 C12orf40Q86WS4 652 aa6.02□□□□□ -1.45
LAPTM4A-202ENST00000483117 STK11IPQ8N1F8 1099 aa6.02□□□□□ -1.45
LAPTM4A-202ENST00000483117 CEP44Q9C0F1 390 aa6.02□□□□□ -1.45
LAPTM4A-202ENST00000483117 SRCIN1Q9C0H9 1055 aa6.02□□□□□ -1.45
LAPTM4A-202ENST00000483117 CELA3AP09093 270 aa6.01□□□□□ -1.45
LAPTM4A-202ENST00000483117 NTF4P34130 210 aa6.01□□□□□ -1.45
LAPTM4A-202ENST00000483117 OXCT1P55809 520 aa6.01□□□□□ -1.45
LAPTM4A-202ENST00000483117 ZNF792Q3KQV3 632 aa6.01□□□□□ -1.45
LAPTM4A-202ENST00000483117 ARHGAP27Q6ZUM4 889 aa6.01□□□□□ -1.45
LAPTM4A-202ENST00000483117 MISP3Q96FF7 219 aa6.01□□□□□ -1.45
LAPTM4A-202ENST00000483117 PPM1HQ9ULR3 514 aa6.01□□□□□ -1.45
LAPTM4A-202ENST00000483117 PLAGL2Q9UPG8 496 aa6.01□□□□□ -1.45
LAPTM4A-202ENST00000483117 TRIM37O94972 964 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 CEACAM5P06731 702 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 P4HBP07237 508 aaKnown RBP6□□□□□ -1.45
LAPTM4A-202ENST00000483117 ITIH2P19823 946 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 ATP2B2Q01814 1243 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 KCNA1Q09470 495 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 IFI16Q16666 785 aaKnown RBP6□□□□□ -1.45
LAPTM4A-202ENST00000483117 AOC3Q16853 763 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 LLGL2Q6P1M3 1020 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 ASIC4Q96FT7 647 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 HEXIM2Q96MH2 286 aaKnown RBP6□□□□□ -1.45
LAPTM4A-202ENST00000483117 C12orf49Q9H741 205 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 PICK1Q9NRD5 415 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 PCDHA4Q9UN74 947 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 SAMM50Q9Y512 469 aa6□□□□□ -1.45
LAPTM4A-202ENST00000483117 GIPC1O14908 333 aa5.99□□□□□ -1.45
LAPTM4A-202ENST00000483117 PAPLNO95428 1278 aa5.99□□□□□ -1.45
LAPTM4A-202ENST00000483117 USP17L7P0C7H9 530 aa5.99□□□□□ -1.45
LAPTM4A-202ENST00000483117 JUNBP17275 347 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms