RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 RFX7Q2KHR2 1363 aa10.64□□□□□ -0.71
SNX4-205ENST00000482965 OTOFQ9HC10 1997 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 CENPBP07199 599 aaPredicted RBP10.63□□□□□ -0.71
SNX4-205ENST00000482965 PDE6AP16499 860 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 IREB2P48200 963 aaKnown RBP10.63□□□□□ -0.71
SNX4-205ENST00000482965 PPP4CP60510 307 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 SLC9C2Q5TAH2 1124 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 DCAF15Q66K64 600 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 ZSCAN29Q8IWY8 852 aaPredicted RBP10.63□□□□□ -0.71
SNX4-205ENST00000482965 JMYQ8N9B5 988 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 MIGA1Q8NAN2 632 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 SH3RF3Q8TEJ3 882 aaPredicted RBP10.63□□□□□ -0.71
SNX4-205ENST00000482965 CCDC102AQ96A19 550 aa10.63□□□□□ -0.71
SNX4-205ENST00000482965 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.71
SNX4-205ENST00000482965 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.63□□□□□ -0.71
SNX4-205ENST00000482965 MYH1P12882 1939 aa10.62□□□□□ -0.71
SNX4-205ENST00000482965 AOC2O75106 756 aa10.62□□□□□ -0.71
SNX4-205ENST00000482965 USP2O75604 605 aaPredicted RBP10.62□□□□□ -0.71
SNX4-205ENST00000482965 GLRX3O76003 335 aaKnown RBP10.62□□□□□ -0.71
SNX4-205ENST00000482965 DYNLL1P63167 89 aaKnown RBP10.62□□□□□ -0.71
SNX4-205ENST00000482965 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
SNX4-205ENST00000482965 CHD1LQ86WJ1 897 aa10.62□□□□□ -0.71
SNX4-205ENST00000482965 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
SNX4-205ENST00000482965 ZFPM1Q8IX07 1006 aa10.62□□□□□ -0.71
SNX4-205ENST00000482965 DDX4Q9NQI0 724 aaKnown RBP10.62□□□□□ -0.71
SNX4-205ENST00000482965 THSD7BQ9C0I4 1608 aa10.62□□□□□ -0.71
SNX4-205ENST00000482965 SALL3Q9BXA9 1300 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 ZNF532Q9HCE3 1301 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 MAGEB6P1A0A0J9YX57 407 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 SLC10A3P09131 477 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 ADD2P35612 726 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 NUCB1Q02818 461 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 NOGQ13253 232 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 LDLRAD1Q5T700 205 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 ZSCAN25Q6NSZ9 544 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 RASAL3Q86YV0 1011 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 ANKRD13AQ8IZ07 590 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 PI4K2BQ8TCG2 481 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 TGFBRAP1Q8WUH2 860 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 CSRNP1Q96S65 589 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 ZNF341Q9BYN7 854 aa10.61□□□□□ -0.71
SNX4-205ENST00000482965 OSBPL5Q9H0X9 879 aaPredicted RBP10.61□□□□□ -0.71
SNX4-205ENST00000482965 NAV1Q8NEY1 1877 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 TCRBV5S4A2TA0A5A2 114 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 DDTLA6NHG4 134 aaPredicted RBP10.6□□□□□ -0.71
SNX4-205ENST00000482965 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 FAM155AB1AL88 458 aaPredicted RBP10.6□□□□□ -0.71
SNX4-205ENST00000482965 NEFLP07196 543 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 MAP2K2P36507 400 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 USP5P45974 858 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 PDE1AP54750 535 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 MAP3K9P80192 1104 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 MIGA2Q7L4E1 593 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 SH3BP5LQ7L8J4 393 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 MAPKAPK5Q8IW41 473 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 KBTBD3Q8NAB2 608 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 SLC10A4Q96EP9 437 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 CLMNQ96JQ2 1002 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 WRNIP1Q96S55 665 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 STAP2Q9UGK3 403 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 CSADQ9Y600 493 aa10.6□□□□□ -0.71
SNX4-205ENST00000482965 COL2A1P02458 1487 aaPredicted RBP10.6□□□□□ -0.71
SNX4-205ENST00000482965 FLT1P17948 1338 aa10.59□□□□□ -0.71
SNX4-205ENST00000482965 MAP2K1Q02750 393 aaPredicted RBP10.59□□□□□ -0.71
SNX4-205ENST00000482965 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
SNX4-205ENST00000482965 UBE3CQ15386 1083 aa10.59□□□□□ -0.71
SNX4-205ENST00000482965 LRRFIP1Q32MZ4 808 aaKnown RBP10.59□□□□□ -0.71
SNX4-205ENST00000482965 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
SNX4-205ENST00000482965 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNX4-205ENST00000482965 RIOK1Q9BRS2 568 aaKnown RBP10.59□□□□□ -0.71
SNX4-205ENST00000482965 FSD1Q9BTV5 496 aa10.59□□□□□ -0.71
SNX4-205ENST00000482965 CRNKL1Q9BZJ0 848 aaKnown RBP10.59□□□□□ -0.71
SNX4-205ENST00000482965 ATRNL1Q5VV63 1379 aa10.59□□□□□ -0.71
SNX4-205ENST00000482965 MBD4O95243 580 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 ZFYP08048 801 aaPredicted RBP10.58□□□□□ -0.72
SNX4-205ENST00000482965 HSPA1AP0DMV8 641 aaKnown RBP10.58□□□□□ -0.72
SNX4-205ENST00000482965 HSPA1BP0DMV9 641 aaKnown RBP10.58□□□□□ -0.72
SNX4-205ENST00000482965 KIF23Q02241 960 aaPredicted RBP10.58□□□□□ -0.72
SNX4-205ENST00000482965 VGLL4Q14135 290 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.58□□□□□ -0.72
SNX4-205ENST00000482965 LCORLQ8N3X6 602 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 AIDAQ96BJ3 306 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 WNK4Q96J92 1243 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 ZIC5Q96T25 663 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 BEGAINQ9BUH8 593 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 DHX36Q9H2U1 1008 aaKnown RBP10.58□□□□□ -0.72
SNX4-205ENST00000482965 ARMT1Q9H993 441 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 ELP3Q9H9T3 547 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
SNX4-205ENST00000482965 BAZ2AQ9UIF9 1905 aaKnown RBP10.58□□□□□ -0.72
SNX4-205ENST00000482965 SIPA1L1O43166 1804 aa10.58□□□□□ -0.72
SNX4-205ENST00000482965 CEP350Q5VT06 3117 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 RNF113AO15541 343 aaKnown RBP10.57□□□□□ -0.72
SNX4-205ENST00000482965 CHGBP05060 677 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 HLA-DOAP06340 250 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 INPP5BP32019 993 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 SPRYD7Q5W111 196 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 PLEKHM2Q8IWE5 1019 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 APPBP2Q92624 585 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms