RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 GPR75-ASB3A0A0A6YYF3 556 aa19.18■□□□□ 0.66
COL16A1-212ENST00000482478 ZAP70P43403 619 aa19.18■□□□□ 0.66
COL16A1-212ENST00000482478 C20orf194Q5TEA3 1177 aa19.18■□□□□ 0.66
COL16A1-212ENST00000482478 ZFPM1Q8IX07 1006 aa19.18■□□□□ 0.66
COL16A1-212ENST00000482478 RPAP2Q8IXW5 612 aaPredicted RBP19.18■□□□□ 0.66
COL16A1-212ENST00000482478 ZNF384Q8TF68 577 aa19.18■□□□□ 0.66
COL16A1-212ENST00000482478 CFHR5Q9BXR6 569 aa19.18■□□□□ 0.66
COL16A1-212ENST00000482478 DDX4Q9NQI0 724 aaKnown RBP19.18■□□□□ 0.66
COL16A1-212ENST00000482478 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
COL16A1-212ENST00000482478 FKTNO75072 461 aa19.17■□□□□ 0.66
COL16A1-212ENST00000482478 CRHR2Q13324 411 aa19.17■□□□□ 0.66
COL16A1-212ENST00000482478 PPIL2Q13356 520 aa19.17■□□□□ 0.66
COL16A1-212ENST00000482478 SNAPC2Q13487 334 aa19.17■□□□□ 0.66
COL16A1-212ENST00000482478 TEX11Q8IYF3 940 aa19.17■□□□□ 0.66
COL16A1-212ENST00000482478 RHPN1Q8TCX5 695 aa19.17■□□□□ 0.66
COL16A1-212ENST00000482478 BRI3BPQ8WY22 251 aa19.17■□□□□ 0.66
COL16A1-212ENST00000482478 FAM163AQ96GL9 167 aaPredicted RBP19.17■□□□□ 0.66
COL16A1-212ENST00000482478 ZNF512BQ96KM6 892 aaPredicted RBP19.17■□□□□ 0.66
COL16A1-212ENST00000482478 AATFQ9NY61 560 aaKnown RBP eCLIP19.17■□□□□ 0.66
COL16A1-212ENST00000482478 DOCK1Q14185 1865 aa19.16■□□□□ 0.66
COL16A1-212ENST00000482478 IDH1O75874 414 aaKnown RBP19.16■□□□□ 0.66
COL16A1-212ENST00000482478 CYP2E1P05181 493 aaPredicted RBP19.16■□□□□ 0.66
COL16A1-212ENST00000482478 RHBDL3P58872 404 aa19.16■□□□□ 0.66
COL16A1-212ENST00000482478 PDE3AQ14432 1141 aa19.16■□□□□ 0.66
COL16A1-212ENST00000482478 CLASRPQ8N2M8 674 aaKnown RBP19.16■□□□□ 0.66
COL16A1-212ENST00000482478 KIF1BPQ96EK5 621 aa19.16■□□□□ 0.66
COL16A1-212ENST00000482478 R3HDMLQ9H3Y0 253 aa19.16■□□□□ 0.66
COL16A1-212ENST00000482478 PIH1D3Q9NQM4 214 aaKnown RBP19.16■□□□□ 0.66
COL16A1-212ENST00000482478 COL2A1P02458 1487 aaPredicted RBP19.16■□□□□ 0.66
COL16A1-212ENST00000482478 DDTLA6NHG4 134 aaPredicted RBP19.15■□□□□ 0.66
COL16A1-212ENST00000482478 IRF6O14896 467 aa19.15■□□□□ 0.66
COL16A1-212ENST00000482478 BAG3O95817 575 aa19.15■□□□□ 0.66
COL16A1-212ENST00000482478 CETPP11597 493 aa19.15■□□□□ 0.66
COL16A1-212ENST00000482478 TAF1CQ15572 869 aaPredicted RBP19.15■□□□□ 0.66
COL16A1-212ENST00000482478 NOM1Q5C9Z4 860 aaKnown RBP19.15■□□□□ 0.66
COL16A1-212ENST00000482478 NOL9Q5SY16 702 aaKnown RBP19.15■□□□□ 0.66
COL16A1-212ENST00000482478 MS4A4AQ96JQ5 239 aa19.15■□□□□ 0.66
COL16A1-212ENST00000482478 PICK1Q9NRD5 415 aa19.15■□□□□ 0.66
COL16A1-212ENST00000482478 NDUFB9Q9Y6M9 179 aa19.15■□□□□ 0.66
COL16A1-212ENST00000482478 TESPA1A2RU30 521 aaPredicted RBP19.14■□□□□ 0.65
COL16A1-212ENST00000482478 IFIT2P09913 472 aaKnown RBP19.14■□□□□ 0.65
COL16A1-212ENST00000482478 PPATQ06203 517 aa19.14■□□□□ 0.65
COL16A1-212ENST00000482478 SH3BP5LQ7L8J4 393 aa19.14■□□□□ 0.65
COL16A1-212ENST00000482478 SH3RF3Q8TEJ3 882 aaPredicted RBP19.14■□□□□ 0.65
COL16A1-212ENST00000482478 PTPN18Q99952 460 aa19.14■□□□□ 0.65
COL16A1-212ENST00000482478 OSBPL5Q9H0X9 879 aaPredicted RBP19.14■□□□□ 0.65
COL16A1-212ENST00000482478 MAP4K4O95819 1239 aaPredicted RBP19.13■□□□□ 0.65
COL16A1-212ENST00000482478 PLCG2P16885 1265 aa19.13■□□□□ 0.65
COL16A1-212ENST00000482478 SCYL3Q8IZE3 742 aa19.13■□□□□ 0.65
COL16A1-212ENST00000482478 FAM43AQ8N2R8 423 aa19.13■□□□□ 0.65
COL16A1-212ENST00000482478 ADGRA1Q86SQ6 560 aa19.12■□□□□ 0.65
COL16A1-212ENST00000482478 SIRT2Q8IXJ6 389 aa19.12■□□□□ 0.65
COL16A1-212ENST00000482478 DNAJC2Q99543 621 aaKnown RBP19.12■□□□□ 0.65
COL16A1-212ENST00000482478 ZFYVE28Q9HCC9 887 aa19.12■□□□□ 0.65
COL16A1-212ENST00000482478 ZNF112Q9UJU3 913 aa19.12■□□□□ 0.65
COL16A1-212ENST00000482478 MYO5AQ9Y4I1 1855 aaKnown RBP19.11■□□□□ 0.65
COL16A1-212ENST00000482478 FLT1P17948 1338 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 FAM196BA6NMK8 535 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 CYP7A1P22680 504 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 MAP3K12Q12852 859 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 PKN2Q16513 984 aaKnown RBP19.11■□□□□ 0.65
COL16A1-212ENST00000482478 MAPKAPK5Q8IW41 473 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 MAGEB6Q8N7X4 407 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 ERO1AQ96HE7 468 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 TRIM34Q9BYJ4 488 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL16A1-212ENST00000482478 TRIM17Q9Y577 477 aa19.11■□□□□ 0.65
COL16A1-212ENST00000482478 FOCADQ5VW36 1801 aa19.1■□□□□ 0.65
COL16A1-212ENST00000482478 BTBD19C9JJ37 291 aa19.1■□□□□ 0.65
COL16A1-212ENST00000482478 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
COL16A1-212ENST00000482478 SLURP2P0DP57 97 aa19.1■□□□□ 0.65
COL16A1-212ENST00000482478 MIGA1Q8NAN2 632 aa19.1■□□□□ 0.65
COL16A1-212ENST00000482478 CD99L2Q8TCZ2 262 aa19.1■□□□□ 0.65
COL16A1-212ENST00000482478 HPS5Q9UPZ3 1129 aa19.1■□□□□ 0.65
COL16A1-212ENST00000482478 IGSF3O75054 1194 aa19.09■□□□□ 0.65
COL16A1-212ENST00000482478 TGFBRAP1Q8WUH2 860 aa19.09■□□□□ 0.65
COL16A1-212ENST00000482478 ANTXR1Q9H6X2 564 aa19.09■□□□□ 0.65
COL16A1-212ENST00000482478 CDK5RAP2Q96SN8 1893 aa19.09■□□□□ 0.65
COL16A1-212ENST00000482478 PHF20L1A8MW92 1017 aa19.08■□□□□ 0.64
COL16A1-212ENST00000482478 RRP1P56182 461 aaKnown RBP19.08■□□□□ 0.64
COL16A1-212ENST00000482478 SP3Q02447 781 aa19.08■□□□□ 0.64
COL16A1-212ENST00000482478 TTF1Q15361 905 aaPredicted RBP19.08■□□□□ 0.64
COL16A1-212ENST00000482478 SLC4A8Q2Y0W8 1093 aa19.08■□□□□ 0.64
COL16A1-212ENST00000482478 FBXO46Q6PJ61 603 aaPredicted RBP19.08■□□□□ 0.64
COL16A1-212ENST00000482478 ZCCHC17Q9NP64 241 aaKnown RBP19.08■□□□□ 0.64
COL16A1-212ENST00000482478 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.08■□□□□ 0.64
COL16A1-212ENST00000482478 KCNH4Q9UQ05 1017 aa19.08■□□□□ 0.64
COL16A1-212ENST00000482478 NAV1Q8NEY1 1877 aa19.07■□□□□ 0.64
COL16A1-212ENST00000482478 SIPA1L1O43166 1804 aa19.07■□□□□ 0.64
COL16A1-212ENST00000482478 ATAD5Q96QE3 1844 aa19.07■□□□□ 0.64
COL16A1-212ENST00000482478 GOLIM4O00461 696 aa19.07■□□□□ 0.64
COL16A1-212ENST00000482478 PTPRAP18433 802 aa19.07■□□□□ 0.64
COL16A1-212ENST00000482478 SOX10P56693 466 aa19.07■□□□□ 0.64
COL16A1-212ENST00000482478 DYNLL1P63167 89 aaKnown RBP19.07■□□□□ 0.64
COL16A1-212ENST00000482478 CERS3Q8IU89 383 aa19.07■□□□□ 0.64
COL16A1-212ENST00000482478 CRACR2BQ8N4Y2 399 aaPredicted RBP19.07■□□□□ 0.64
COL16A1-212ENST00000482478 LRRCC1Q9C099 1032 aa19.07■□□□□ 0.64
COL16A1-212ENST00000482478 SAP30BPQ9UHR5 308 aaKnown RBP19.07■□□□□ 0.64
COL16A1-212ENST00000482478 ZHX2Q9Y6X8 837 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms