RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	HIBADH	P31937	336 aa	Known RBP	10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	TNFAIP1	Q13829	316 aa		10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	MFSD14B	Q5SR56	506 aa		10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	INTS3	Q68E01	1043 aa	Known RBP	10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	ERO1A	Q96HE7	468 aa		10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	FAM84B	Q96KN1	310 aa	Predicted RBP	10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	PTPN18	Q99952	460 aa		10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	ZNF70	Q9UC06	446 aa	Predicted RBP	10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	SERPINA10	Q9UK55	444 aa		10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	TTF2	Q9UNY4	1162 aa	Known RBP	10.86	□□□□□ -0.67
UBE2F-222	ENST00000482096	CACNA1F	O60840	1977 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	GYG1	P46976	350 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	CRHR2	Q13324	411 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	DZIP1L	Q8IYY4	767 aa	Known RBP	10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	NLRP7	Q8WX94	980 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	TATDN2	Q93075	761 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	KAZALD1	Q96I82	304 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	TEPSIN	Q96N21	525 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	PUS3	Q9BZE2	481 aa	Known RBP	10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	SRCIN1	Q9C0H9	1055 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	TDRD3	Q9H7E2	651 aa	Known RBP	10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	RABGEF1	Q9UJ41	708 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	PTPN22	Q9Y2R2	807 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	RIPOR2	Q9Y4F9	1068 aa		10.85	□□□□□ -0.67
UBE2F-222	ENST00000482096	TK2	O00142	265 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	TRIM66	O15016	1216 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	SP3	Q02447	781 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	METTL3	Q86U44	580 aa	Known RBP	10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	CD99L2	Q8TCZ2	262 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	OPTN	Q96CV9	577 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	SUCLG2	Q96I99	432 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	PHOX2B	Q99453	314 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	ELP3	Q9H9T3	547 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	UTY	O14607	1347 aa		10.84	□□□□□ -0.67
UBE2F-222	ENST00000482096	TCP10L2	B9ZVM9	353 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	CRK	P46108	304 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	TNNI2	P48788	182 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	HDLBP	Q00341	1268 aa	Known RBP	10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	SLC4A10	Q6U841	1118 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	FBXO33	Q7Z6M2	555 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	PXYLP1	Q8TE99	480 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	ARMC5	Q96C12	935 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	EFCC1	Q9HA90	598 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096	MROH5	Q6ZUA9	1318 aa		10.83	□□□□□ -0.68
UBE2F-222	ENST00000482096		A0A1B0GUL6	1792 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	ECM29	Q5VYK3	1845 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	OAT	P04181	439 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	CAP1	Q01518	475 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	GRIK5	Q16478	980 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	RABL6	Q3YEC7	729 aa	Predicted RBP	10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	BRI3BP	Q8WY22	251 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	GCC1	Q96CN9	775 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	TMEM39B	Q9GZU3	492 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	LAMB1	P07942	1786 aa		10.82	□□□□□ -0.68
UBE2F-222	ENST00000482096	ANP32C	O43423	234 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	GTF2A2	P52657	109 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	VGLL4	Q14135	290 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	LRRC24	Q50LG9	513 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	VPS37D	Q86XT2	251 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	TBC1D22A	Q8WUA7	517 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	MRI	Q9BWK5	157 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	BICC1	Q9H694	974 aa	Known RBP	10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	ZFYVE28	Q9HCC9	887 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	CSAD	Q9Y600	493 aa		10.81	□□□□□ -0.68
UBE2F-222	ENST00000482096	CCL15-CCL14	A0A0B4J2E2	113 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	SPDYE5	A6NIY4	337 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	CHAF1A	Q13111	956 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	ARHGEF6	Q15052	776 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	TAF1C	Q15572	869 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	CCL15	Q16663	113 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	CAVIN4	Q5BKX8	364 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	ANKRD44	Q8N8A2	993 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	VGLL2	Q8N8G2	317 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	TEKT1	Q969V4	418 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	NBPF3	Q9H094	633 aa		10.8	□□□□□ -0.68
UBE2F-222	ENST00000482096	KIAA0100	Q14667	2235 aa	Known RBP	10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	FRAT2	O75474	233 aa	Predicted RBP	10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	PDE8B	O95263	885 aa		10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	EN2	P19622	333 aa	Predicted RBP	10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	METTL24	Q5JXM2	366 aa		10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	FKBP1C	Q5VVH2	108 aa		10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	FAM83A	Q86UY5	434 aa		10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	FAM43A	Q8N2R8	423 aa		10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	ZNF333	Q96JL9	665 aa		10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	ZDHHC15	Q96MV8	337 aa		10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	SUGT1	Q9Y2Z0	365 aa		10.79	□□□□□ -0.68
UBE2F-222	ENST00000482096	HTT	P42858	3142 aa		10.78	□□□□□ -0.68
UBE2F-222	ENST00000482096	RCCD1	A6NED2	376 aa		10.78	□□□□□ -0.68
UBE2F-222	ENST00000482096	HR	O43593	1189 aa		10.78	□□□□□ -0.68
UBE2F-222	ENST00000482096	FGFR2	P21802	821 aa		10.78	□□□□□ -0.68
UBE2F-222	ENST00000482096	BCAM	P50895	628 aa		10.78	□□□□□ -0.68
UBE2F-222	ENST00000482096	CACNB3	P54284	484 aa		10.78	□□□□□ -0.68
UBE2F-222	ENST00000482096	MDM2	Q00987	491 aa	Predicted RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms