RNA–Protein interactions for RNA: ENST00000482019.1

LINC02004-201, Transcript of long intergenic non-protein coding RNA 2004, humanhuman

TSL 2 BASIC

Gene LINC02004, Length 294 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02004-201ENST00000482019 ZFPM1Q8IX07 1006 aa12.57□□□□□ -0.4
LINC02004-201ENST00000482019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC02004-201ENST00000482019 CFHR5Q9BXR6 569 aa12.57□□□□□ -0.4
LINC02004-201ENST00000482019 LRRCC1Q9C099 1032 aa12.57□□□□□ -0.4
LINC02004-201ENST00000482019 DDX4Q9NQI0 724 aaKnown RBP12.57□□□□□ -0.4
LINC02004-201ENST00000482019 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
LINC02004-201ENST00000482019 ZNF112Q9UJU3 913 aa12.57□□□□□ -0.4
LINC02004-201ENST00000482019 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
LINC02004-201ENST00000482019 DOCK2Q92608 1830 aa12.56□□□□□ -0.4
LINC02004-201ENST00000482019 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
LINC02004-201ENST00000482019 IDH1O75874 414 aaKnown RBP12.56□□□□□ -0.4
LINC02004-201ENST00000482019 PPP4CP60510 307 aa12.56□□□□□ -0.4
LINC02004-201ENST00000482019 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
LINC02004-201ENST00000482019 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
LINC02004-201ENST00000482019 ERO1BQ86YB8 467 aa12.56□□□□□ -0.4
LINC02004-201ENST00000482019 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
LINC02004-201ENST00000482019 CERS3Q8IU89 383 aa12.56□□□□□ -0.4
LINC02004-201ENST00000482019 GTF2A2P52657 109 aa12.55□□□□□ -0.4
LINC02004-201ENST00000482019 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
LINC02004-201ENST00000482019 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
LINC02004-201ENST00000482019 NOL9Q5SY16 702 aaKnown RBP12.55□□□□□ -0.4
LINC02004-201ENST00000482019 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
LINC02004-201ENST00000482019 SH3BP5LQ7L8J4 393 aa12.55□□□□□ -0.4
LINC02004-201ENST00000482019 TEX11Q8IYF3 940 aa12.55□□□□□ -0.4
LINC02004-201ENST00000482019 ZKSCAN4Q969J2 545 aaPredicted RBP12.55□□□□□ -0.4
LINC02004-201ENST00000482019 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
LINC02004-201ENST00000482019 DCTPP1Q9H773 170 aa12.55□□□□□ -0.4
LINC02004-201ENST00000482019 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC02004-201ENST00000482019 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
LINC02004-201ENST00000482019 CYP7A1P22680 504 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 INPP5BP32019 993 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 PPATQ06203 517 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 PPIL2Q13356 520 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 ADGRA1Q86SQ6 560 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
LINC02004-201ENST00000482019 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 OSBPL5Q9H0X9 879 aaPredicted RBP12.54□□□□□ -0.4
LINC02004-201ENST00000482019 ANTXR1Q9H6X2 564 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
LINC02004-201ENST00000482019 IGF2BP3O00425 579 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC02004-201ENST00000482019 TBC1D12O60347 775 aa12.53□□□□□ -0.4
LINC02004-201ENST00000482019 TBC1D8O95759 1140 aa12.53□□□□□ -0.4
LINC02004-201ENST00000482019 ATP5JP18859 108 aa12.53□□□□□ -0.4
LINC02004-201ENST00000482019 MAGEB6Q8N7X4 407 aa12.53□□□□□ -0.4
LINC02004-201ENST00000482019 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
LINC02004-201ENST00000482019 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
LINC02004-201ENST00000482019 DHX36Q9H2U1 1008 aaKnown RBP12.53□□□□□ -0.4
LINC02004-201ENST00000482019 CCL15-CCL14A0A0B4J2E2 113 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 PHF20L1A8MW92 1017 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 GPR25O00155 361 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 CETPP11597 493 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 CCL15Q16663 113 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 SCYL3Q8IZE3 742 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 BRI3BPQ8WY22 251 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 PTPN18Q99952 460 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 PCDHB15Q9Y5E8 787 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 FLT1P17948 1338 aa12.52□□□□□ -0.41
LINC02004-201ENST00000482019 GOLIM4O00461 696 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 IRF6O14896 467 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 SMARCA5O60264 1052 aaPredicted RBP12.51□□□□□ -0.41
LINC02004-201ENST00000482019 CTNND1O60716 968 aaKnown RBP12.51□□□□□ -0.41
LINC02004-201ENST00000482019 AAMPQ13685 434 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 TGFBRAP1Q8WUH2 860 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 ZNF296Q8WUU4 475 aaPredicted RBP12.51□□□□□ -0.41
LINC02004-201ENST00000482019 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 HAUS7Q99871 368 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 ZCCHC17Q9NP64 241 aaKnown RBP12.51□□□□□ -0.41
LINC02004-201ENST00000482019 PICK1Q9NRD5 415 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 PAG1Q9NWQ8 432 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 PI4KBQ9UBF8 816 aa12.51□□□□□ -0.41
LINC02004-201ENST00000482019 HERC5Q9UII4 1024 aaKnown RBP12.51□□□□□ -0.41
LINC02004-201ENST00000482019 MYO5AQ9Y4I1 1855 aaKnown RBP12.51□□□□□ -0.41
LINC02004-201ENST00000482019 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 PDE6AP16499 860 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 DYNLL1P63167 89 aaKnown RBP12.5□□□□□ -0.41
LINC02004-201ENST00000482019 DGKZQ13574 1117 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 SLC9C2Q5TAH2 1124 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 MAPKAPK5Q8IW41 473 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 MIGA1Q8NAN2 632 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC02004-201ENST00000482019 MCOLN1Q9GZU1 580 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC02004-201ENST00000482019 ECHDC1Q9NTX5 307 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 KCNH4Q9UQ05 1017 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 FOCADQ5VW36 1801 aa12.5□□□□□ -0.41
LINC02004-201ENST00000482019 ZNF532Q9HCE3 1301 aa12.49□□□□□ -0.41
LINC02004-201ENST00000482019 CXCL11O14625 94 aa12.49□□□□□ -0.41
LINC02004-201ENST00000482019 FKTNO75072 461 aa12.49□□□□□ -0.41
LINC02004-201ENST00000482019 USP5P45974 858 aa12.49□□□□□ -0.41
LINC02004-201ENST00000482019 CRHR2Q13324 411 aa12.49□□□□□ -0.41
LINC02004-201ENST00000482019 CTU1Q7Z7A3 348 aaKnown RBP12.49□□□□□ -0.41
LINC02004-201ENST00000482019 FAM43AQ8N2R8 423 aa12.49□□□□□ -0.41
LINC02004-201ENST00000482019 ABHD8Q96I13 439 aa12.49□□□□□ -0.41
LINC02004-201ENST00000482019 RIOK1Q9BRS2 568 aaKnown RBP12.49□□□□□ -0.41
LINC02004-201ENST00000482019 R3HDMLQ9H3Y0 253 aa12.49□□□□□ -0.41
LINC02004-201ENST00000482019 DOCK1Q14185 1865 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms