RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PRKRIP1Q9H875 184 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-224ENST00000481929 DAGLAQ9Y4D2 1042 aa18.82■□□□□ 0.6
HDAC6-224ENST00000481929 UNC80Q8N2C7 3258 aa18.82■□□□□ 0.6
HDAC6-224ENST00000481929 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 VAMP4O75379 141 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 HMGCRP04035 888 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 PTPRAP18433 802 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 ZEB1P37275 1124 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-224ENST00000481929 LRRC24Q50LG9 513 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 VGLL2Q8N8G2 317 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 WDR66Q8TBY9 1149 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 C11orf49Q9H6J7 331 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 AFG3L2Q9Y4W6 797 aa18.81■□□□□ 0.6
HDAC6-224ENST00000481929 KIF16BQ96L93 1317 aa18.8■□□□□ 0.6
HDAC6-224ENST00000481929 IFIT1P09914 478 aaKnown RBP18.8■□□□□ 0.6
HDAC6-224ENST00000481929 DIXDC1Q155Q3 683 aa18.8■□□□□ 0.6
HDAC6-224ENST00000481929 ANKRD13CQ8N6S4 541 aa18.8■□□□□ 0.6
HDAC6-224ENST00000481929 SRCIN1Q9C0H9 1055 aa18.8■□□□□ 0.6
HDAC6-224ENST00000481929 FAM198AQ9UFP1 575 aa18.8■□□□□ 0.6
HDAC6-224ENST00000481929 PHF20L1A8MW92 1017 aa18.79■□□□□ 0.6
HDAC6-224ENST00000481929 FAM110CQ1W6H9 321 aa18.79■□□□□ 0.6
HDAC6-224ENST00000481929 SLC4A10Q6U841 1118 aa18.79■□□□□ 0.6
HDAC6-224ENST00000481929 KAZALD1Q96I82 304 aa18.79■□□□□ 0.6
HDAC6-224ENST00000481929 HMX1Q9NP08 348 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-224ENST00000481929 USP40Q9NVE5 1235 aa18.79■□□□□ 0.6
HDAC6-224ENST00000481929 DOCK3Q8IZD9 2030 aa18.79■□□□□ 0.6
HDAC6-224ENST00000481929 RPTORQ8N122 1335 aa18.78■□□□□ 0.6
HDAC6-224ENST00000481929 PUM3Q15397 648 aaKnown RBP18.78■□□□□ 0.6
HDAC6-224ENST00000481929 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
HDAC6-224ENST00000481929 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
HDAC6-224ENST00000481929 AGTPBP1Q9UPW5 1226 aa18.78■□□□□ 0.6
HDAC6-224ENST00000481929 LRRFIP2Q9Y608 721 aaKnown RBP18.78■□□□□ 0.6
HDAC6-224ENST00000481929 ATRNL1Q5VV63 1379 aa18.78■□□□□ 0.6
HDAC6-224ENST00000481929 DDX60LQ5H9U9 1706 aaKnown RBP18.77■□□□□ 0.6
HDAC6-224ENST00000481929 PTPRFP10586 1907 aa18.77■□□□□ 0.6
HDAC6-224ENST00000481929 TRIM75PA6NK02 468 aa18.77■□□□□ 0.6
HDAC6-224ENST00000481929 ZFPM1Q8IX07 1006 aa18.77■□□□□ 0.6
HDAC6-224ENST00000481929 DOCK2Q92608 1830 aa18.77■□□□□ 0.59
HDAC6-224ENST00000481929 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
HDAC6-224ENST00000481929 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
HDAC6-224ENST00000481929 RABL6Q3YEC7 729 aaPredicted RBP18.76■□□□□ 0.59
HDAC6-224ENST00000481929 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
HDAC6-224ENST00000481929 CTNND1O60716 968 aaKnown RBP18.75■□□□□ 0.59
HDAC6-224ENST00000481929 LDHBP07195 334 aaKnown RBP18.75■□□□□ 0.59
HDAC6-224ENST00000481929 NBPF7P0C2Y1 421 aaPredicted RBP18.75■□□□□ 0.59
HDAC6-224ENST00000481929 SLC5A1P13866 664 aa18.75■□□□□ 0.59
HDAC6-224ENST00000481929 FGFR2P21802 821 aa18.75■□□□□ 0.59
HDAC6-224ENST00000481929 PRDX5P30044 214 aa18.75■□□□□ 0.59
HDAC6-224ENST00000481929 ZSCAN29Q8IWY8 852 aaPredicted RBP18.75■□□□□ 0.59
HDAC6-224ENST00000481929 OGDHLQ9ULD0 1010 aa18.75■□□□□ 0.59
HDAC6-224ENST00000481929 DOCK1Q14185 1865 aa18.74■□□□□ 0.59
HDAC6-224ENST00000481929 ENTPD3O75355 529 aa18.74■□□□□ 0.59
HDAC6-224ENST00000481929 RGS3P49796 1198 aa18.74■□□□□ 0.59
HDAC6-224ENST00000481929 TRIM32Q13049 653 aa18.74■□□□□ 0.59
HDAC6-224ENST00000481929 UTYO14607 1347 aa18.74■□□□□ 0.59
HDAC6-224ENST00000481929 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-224ENST00000481929 TREML2Q5T2D2 321 aa18.73■□□□□ 0.59
HDAC6-224ENST00000481929 FAM109BQ6ICB4 259 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-224ENST00000481929 ANKRD44Q8N8A2 993 aa18.73■□□□□ 0.59
HDAC6-224ENST00000481929 KLHDC4Q8TBB5 520 aa18.73■□□□□ 0.59
HDAC6-224ENST00000481929 IDI2Q9BXS1 227 aa18.73■□□□□ 0.59
HDAC6-224ENST00000481929 PFASO15067 1338 aa18.73■□□□□ 0.59
HDAC6-224ENST00000481929 MAP3K10Q02779 954 aa18.72■□□□□ 0.59
HDAC6-224ENST00000481929 PROCA1Q8NCQ7 364 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-224ENST00000481929 LPIN2Q92539 896 aa18.72■□□□□ 0.59
HDAC6-224ENST00000481929 GUCD1Q96NT3 240 aa18.72■□□□□ 0.59
HDAC6-224ENST00000481929 GJD2Q9UKL4 321 aa18.72■□□□□ 0.59
HDAC6-224ENST00000481929 PHIPQ8WWQ0 1821 aa18.72■□□□□ 0.59
HDAC6-224ENST00000481929 PABPC4Q13310 644 aaKnown RBP eCLIP18.71■□□□□ 0.59
HDAC6-224ENST00000481929 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
HDAC6-224ENST00000481929 SH3BP5LQ7L8J4 393 aa18.71■□□□□ 0.59
HDAC6-224ENST00000481929 CCDC84Q86UT8 332 aaPredicted RBP18.71■□□□□ 0.59
HDAC6-224ENST00000481929 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.71■□□□□ 0.59
HDAC6-224ENST00000481929 POTEB2H3BUK9 544 aa18.7■□□□□ 0.58
HDAC6-224ENST00000481929 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-224ENST00000481929 TRIB2Q92519 343 aa18.7■□□□□ 0.58
HDAC6-224ENST00000481929 FAM161BQ96MY7 647 aa18.7■□□□□ 0.58
HDAC6-224ENST00000481929 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
HDAC6-224ENST00000481929 RFX7Q2KHR2 1363 aa18.69■□□□□ 0.58
HDAC6-224ENST00000481929 DDTLA6NHG4 134 aaPredicted RBP18.69■□□□□ 0.58
HDAC6-224ENST00000481929 PRKAR2AP13861 404 aaKnown RBP18.69■□□□□ 0.58
HDAC6-224ENST00000481929 MAP3K21Q5TCX8 1036 aa18.69■□□□□ 0.58
HDAC6-224ENST00000481929 WDR63Q8IWG1 891 aa18.69■□□□□ 0.58
HDAC6-224ENST00000481929 SALL1Q9NSC2 1324 aa18.69■□□□□ 0.58
HDAC6-224ENST00000481929 SLURP2P0DP57 97 aa18.68■□□□□ 0.58
HDAC6-224ENST00000481929 COL6A1P12109 1028 aa18.68■□□□□ 0.58
HDAC6-224ENST00000481929 COL2A1P02458 1487 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-224ENST00000481929 EYA2O00167 538 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 CYP2B6P20813 491 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 SPP2Q13103 211 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 PICALMQ13492 652 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 LRRC26Q2I0M4 334 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 ZNF697Q5TEC3 545 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 ASCC2Q9H1I8 757 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-224ENST00000481929 PRDM6Q9NQX0 595 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 DENND2AQ9ULE3 1009 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 LOC285556D6RIA3 1793 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 GAKO14976 1311 aa18.67■□□□□ 0.58
HDAC6-224ENST00000481929 HMGCS2P54868 508 aa18.66■□□□□ 0.58
HDAC6-224ENST00000481929 ZGPATQ8N5A5 531 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms