RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CRNKL1Q9BZJ0 848 aaKnown RBP13.86□□□□□ -0.19
HPS4-212ENST00000481910 TMOD2Q9NZR1 351 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 ZNF70Q9UC06 446 aaPredicted RBP13.86□□□□□ -0.19
HPS4-212ENST00000481910 SLC4A4Q9Y6R1 1079 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 CCDC171Q6TFL3 1326 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 RAD50Q92878 1312 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 GNAT2P19087 354 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 CACNB3P54284 484 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 EAPPQ56P03 285 aaPredicted RBP13.86□□□□□ -0.19
HPS4-212ENST00000481910 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
HPS4-212ENST00000481910 TGFBRAP1Q8WUH2 860 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 NMRK2Q9NPI5 230 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 PRKAB2O43741 272 aa13.85□□□□□ -0.19
HPS4-212ENST00000481910 APPP05067 770 aa13.85□□□□□ -0.19
HPS4-212ENST00000481910 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
HPS4-212ENST00000481910 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
HPS4-212ENST00000481910 SDR42E1Q8WUS8 393 aa13.85□□□□□ -0.19
HPS4-212ENST00000481910 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
HPS4-212ENST00000481910 ASTN2O75129 1339 aaPredicted RBP13.84□□□□□ -0.19
HPS4-212ENST00000481910 PATL2C9JE40 543 aaKnown RBP13.84□□□□□ -0.19
HPS4-212ENST00000481910 WDHD1O75717 1129 aaPredicted RBP13.84□□□□□ -0.19
HPS4-212ENST00000481910 USP5P45974 858 aa13.84□□□□□ -0.19
HPS4-212ENST00000481910 PICALMQ13492 652 aa13.84□□□□□ -0.19
HPS4-212ENST00000481910 C8orf34Q49A92 452 aa13.84□□□□□ -0.19
HPS4-212ENST00000481910 ECM29Q5VYK3 1845 aa13.84□□□□□ -0.19
HPS4-212ENST00000481910 TCP10L2B9ZVM9 353 aa13.84□□□□□ -0.19
HPS4-212ENST00000481910 HSPD1P10809 573 aaKnown RBP13.84□□□□□ -0.19
HPS4-212ENST00000481910 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
HPS4-212ENST00000481910 ANGEL2Q5VTE6 544 aaKnown RBP13.84□□□□□ -0.19
HPS4-212ENST00000481910 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
HPS4-212ENST00000481910 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
HPS4-212ENST00000481910 GSG1L2A8MUP6 293 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 YY1P25490 414 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 TCP10Q12799 353 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 NFIAQ12857 509 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 DDRGK1Q96HY6 314 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 IDI2Q9BXS1 227 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 NACAP1Q9BZK3 213 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 GGA3Q9NZ52 723 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 CDK5RAP2Q96SN8 1893 aa13.83□□□□□ -0.2
HPS4-212ENST00000481910 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
HPS4-212ENST00000481910 REC8O95072 547 aa13.82□□□□□ -0.2
HPS4-212ENST00000481910 HSP90AA2PQ14568 343 aaPredicted RBP13.82□□□□□ -0.2
HPS4-212ENST00000481910 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
HPS4-212ENST00000481910 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
HPS4-212ENST00000481910 DCPSQ96C86 337 aaKnown RBP13.82□□□□□ -0.2
HPS4-212ENST00000481910 DCP1AQ9NPI6 582 aaPredicted RBP13.82□□□□□ -0.2
HPS4-212ENST00000481910 DDX4Q9NQI0 724 aaKnown RBP13.82□□□□□ -0.2
HPS4-212ENST00000481910 SCAF8Q9UPN6 1271 aaKnown RBP13.82□□□□□ -0.2
HPS4-212ENST00000481910 CLEC11AQ9Y240 323 aa13.82□□□□□ -0.2
HPS4-212ENST00000481910 PTH1RQ03431 593 aa13.82□□□□□ -0.2
HPS4-212ENST00000481910 MAPK8IP2Q13387 824 aaPredicted RBP13.82□□□□□ -0.2
HPS4-212ENST00000481910 TNFAIP1Q13829 316 aa13.82□□□□□ -0.2
HPS4-212ENST00000481910 FKBP1CQ5VVH2 108 aa13.82□□□□□ -0.2
HPS4-212ENST00000481910 DSCC1Q9BVC3 393 aa13.82□□□□□ -0.2
HPS4-212ENST00000481910 FAM198AQ9UFP1 575 aa13.82□□□□□ -0.2
HPS4-212ENST00000481910 RPAP1Q9BWH6 1393 aaPredicted RBP13.81□□□□□ -0.2
HPS4-212ENST00000481910 FLT1P17948 1338 aa13.81□□□□□ -0.2
HPS4-212ENST00000481910 FOXP2O15409 715 aa13.81□□□□□ -0.2
HPS4-212ENST00000481910 TDO2P48775 406 aa13.81□□□□□ -0.2
HPS4-212ENST00000481910 TNNI2P48788 182 aa13.81□□□□□ -0.2
HPS4-212ENST00000481910 APOBEC3FQ8IUX4 373 aaKnown RBP13.81□□□□□ -0.2
HPS4-212ENST00000481910 NAPBQ9H115 298 aa13.81□□□□□ -0.2
HPS4-212ENST00000481910 MCM9Q9NXL9 1143 aa13.81□□□□□ -0.2
HPS4-212ENST00000481910 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
HPS4-212ENST00000481910 FOCADQ5VW36 1801 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 ENTPD3O75355 529 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 CLSTN1O94985 981 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 FGAP02671 866 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 ZFPM1Q8IX07 1006 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 LSG1Q9H089 658 aaKnown RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 OSBPL5Q9H0X9 879 aaPredicted RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 EPB41L4AQ9HCS5 686 aaPredicted RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 PGAP2Q9UHJ9 254 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 BAZ2AQ9UIF9 1905 aaKnown RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 PITPNM2Q9BZ72 1349 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 SEC24BO95487 1268 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 RASA3Q14644 834 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 FAM83AQ86UY5 434 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 ZSCAN29Q8IWY8 852 aaPredicted RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 FAM151AQ8WW52 585 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 MAP4K1Q92918 833 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 SAP30BPQ9UHR5 308 aaKnown RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 PALD1Q9ULE6 856 aa13.8□□□□□ -0.2
HPS4-212ENST00000481910 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.8□□□□□ -0.2
HPS4-212ENST00000481910 USP17L12C9JPN9 530 aa13.79□□□□□ -0.2
HPS4-212ENST00000481910 USP17L21D6R901 530 aa13.79□□□□□ -0.2
HPS4-212ENST00000481910 POLR3DP05423 398 aaPredicted RBP13.79□□□□□ -0.2
HPS4-212ENST00000481910 SLC4A8Q2Y0W8 1093 aa13.79□□□□□ -0.2
HPS4-212ENST00000481910 AMOTL1Q8IY63 956 aa13.79□□□□□ -0.2
HPS4-212ENST00000481910 TMEM39BQ9GZU3 492 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms