RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 LRRC4CQ9HCJ2 640 aa8.65□□□□□ -1.02
PTPN12-211ENST00000481154 PODXL2Q9NZ53 605 aa8.65□□□□□ -1.02
PTPN12-211ENST00000481154 SPG7Q9UQ90 795 aa8.65□□□□□ -1.02
PTPN12-211ENST00000481154 RNGTTO60942 597 aaKnown RBP8.64□□□□□ -1.03
PTPN12-211ENST00000481154 USP17L7P0C7H9 530 aa8.64□□□□□ -1.03
PTPN12-211ENST00000481154 ZNF252P-AS1Q0IIN9 211 aa8.64□□□□□ -1.03
PTPN12-211ENST00000481154 CDK5R2Q13319 367 aa8.64□□□□□ -1.03
PTPN12-211ENST00000481154 CPSF6Q16630 551 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPN12-211ENST00000481154 MSMPQ1L6U9 139 aa8.64□□□□□ -1.03
PTPN12-211ENST00000481154 RASIP1Q5U651 963 aa8.64□□□□□ -1.03
PTPN12-211ENST00000481154 ACSBG1Q96GR2 724 aa8.64□□□□□ -1.03
PTPN12-211ENST00000481154 RNF19AQ9NV58 838 aa8.64□□□□□ -1.03
PTPN12-211ENST00000481154 CELA3AP09093 270 aa8.63□□□□□ -1.03
PTPN12-211ENST00000481154 BMP6P22004 513 aa8.63□□□□□ -1.03
PTPN12-211ENST00000481154 MFAP1P55081 439 aaKnown RBP8.63□□□□□ -1.03
PTPN12-211ENST00000481154 SMYD4Q8IYR2 804 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-211ENST00000481154 PPM1HQ9ULR3 514 aa8.63□□□□□ -1.03
PTPN12-211ENST00000481154 NEFMP07197 916 aa8.62□□□□□ -1.03
PTPN12-211ENST00000481154 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
PTPN12-211ENST00000481154 DUSP27Q5VZP5 1158 aa8.62□□□□□ -1.03
PTPN12-211ENST00000481154 EMILIN2Q9BXX0 1053 aa8.62□□□□□ -1.03
PTPN12-211ENST00000481154 CEP44Q9C0F1 390 aa8.62□□□□□ -1.03
PTPN12-211ENST00000481154 FAM8A1Q9UBU6 413 aa8.62□□□□□ -1.03
PTPN12-211ENST00000481154 CSADQ9Y600 493 aa8.62□□□□□ -1.03
PTPN12-211ENST00000481154 ANKRD33BA6NCL7 494 aa8.61□□□□□ -1.03
PTPN12-211ENST00000481154 GIPC1O14908 333 aa8.61□□□□□ -1.03
PTPN12-211ENST00000481154 WNT11O96014 354 aa8.61□□□□□ -1.03
PTPN12-211ENST00000481154 ZC3H12AQ5D1E8 599 aaKnown RBP8.61□□□□□ -1.03
PTPN12-211ENST00000481154 DNAJC14Q6Y2X3 702 aaPredicted RBP8.6□□□□□ -1.03
PTPN12-211ENST00000481154 ISL2Q96A47 359 aa8.6□□□□□ -1.03
PTPN12-211ENST00000481154 ZC3H7BQ9UGR2 993 aaKnown RBP8.6□□□□□ -1.03
PTPN12-211ENST00000481154 DCDC2CA8MYV0 355 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 FAM87AP0C7U9 286 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 CYP27A1Q02318 531 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 PPM1JQ5JR12 505 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 PCNX4Q63HM2 1172 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 LLGL2Q6P1M3 1020 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 OGFOD3Q6PK18 319 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 SSU72Q9NP77 194 aaKnown RBP8.59□□□□□ -1.03
PTPN12-211ENST00000481154 CACNA2D2Q9NY47 1150 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 CCDC39Q9UFE4 941 aa8.59□□□□□ -1.03
PTPN12-211ENST00000481154 ANGEL1Q9UNK9 670 aaKnown RBP8.59□□□□□ -1.03
PTPN12-211ENST00000481154 TTF2Q9UNY4 1162 aaKnown RBP8.59□□□□□ -1.03
PTPN12-211ENST00000481154 CCDC9Q9Y3X0 531 aaKnown RBP8.59□□□□□ -1.03
PTPN12-211ENST00000481154 PRPF40AO75400 957 aaKnown RBP8.58□□□□□ -1.04
PTPN12-211ENST00000481154 LEFTY1O75610 366 aa8.58□□□□□ -1.04
PTPN12-211ENST00000481154 GNA15P30679 374 aa8.58□□□□□ -1.04
PTPN12-211ENST00000481154 FMNL2Q96PY5 1086 aa8.58□□□□□ -1.04
PTPN12-211ENST00000481154 DUSP9Q99956 384 aaKnown RBP8.58□□□□□ -1.04
PTPN12-211ENST00000481154 SAMM50Q9Y512 469 aa8.58□□□□□ -1.04
PTPN12-211ENST00000481154 EIF4BP23588 611 aaKnown RBP8.57□□□□□ -1.04
PTPN12-211ENST00000481154 IRAK1P51617 712 aa8.57□□□□□ -1.04
PTPN12-211ENST00000481154 ERVK-24P63145 666 aa8.57□□□□□ -1.04
PTPN12-211ENST00000481154 COL19A1Q14993 1142 aa8.57□□□□□ -1.04
PTPN12-211ENST00000481154 EAPPQ56P03 285 aaPredicted RBP8.57□□□□□ -1.04
PTPN12-211ENST00000481154 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
PTPN12-211ENST00000481154 UBE3DQ7Z6J8 389 aa8.57□□□□□ -1.04
PTPN12-211ENST00000481154 C12orf40Q86WS4 652 aa8.57□□□□□ -1.04
PTPN12-211ENST00000481154 RNF214Q8ND24 703 aa8.57□□□□□ -1.04
PTPN12-211ENST00000481154 PCOLCE2Q9UKZ9 415 aa8.57□□□□□ -1.04
PTPN12-211ENST00000481154 PAX4O43316 350 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 TRIM37O94972 964 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 VSIG10LQ86VR7 867 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.56□□□□□ -1.04
PTPN12-211ENST00000481154 ABI1Q8IZP0 508 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 FAM181AQ8N9Y4 354 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 ANKRD24Q8TF21 1146 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 PICK1Q9NRD5 415 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 BSDC1Q9NW68 430 aaPredicted RBP8.56□□□□□ -1.04
PTPN12-211ENST00000481154 PCDHA4Q9UN74 947 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 U3KQE9 123 aa8.56□□□□□ -1.04
PTPN12-211ENST00000481154 PRNPP04156 253 aa8.55□□□□□ -1.04
PTPN12-211ENST00000481154 ERCC3P19447 782 aa8.55□□□□□ -1.04
PTPN12-211ENST00000481154 NTF4P34130 210 aa8.55□□□□□ -1.04
PTPN12-211ENST00000481154 PTPN11Q06124 597 aaPredicted RBP8.55□□□□□ -1.04
PTPN12-211ENST00000481154 LRRC14Q15048 493 aa8.55□□□□□ -1.04
PTPN12-211ENST00000481154 CYP27C1Q4G0S4 372 aa8.55□□□□□ -1.04
PTPN12-211ENST00000481154 NPAS4Q8IUM7 802 aa8.54□□□□□ -1.04
PTPN12-211ENST00000481154 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
PTPN12-211ENST00000481154 FRMD6Q96NE9 622 aa8.54□□□□□ -1.04
PTPN12-211ENST00000481154 DUSP23Q9BVJ7 150 aa8.54□□□□□ -1.04
PTPN12-211ENST00000481154 CYP8B1Q9UNU6 501 aa8.54□□□□□ -1.04
PTPN12-211ENST00000481154 TAL1P17542 331 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-211ENST00000481154 FGD1P98174 961 aa8.53□□□□□ -1.04
PTPN12-211ENST00000481154 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-211ENST00000481154 SV2BQ7L1I2 683 aa8.53□□□□□ -1.04
PTPN12-211ENST00000481154 PLD6Q8N2A8 252 aaKnown RBP8.53□□□□□ -1.04
PTPN12-211ENST00000481154 FLCNQ8NFG4 579 aa8.53□□□□□ -1.04
PTPN12-211ENST00000481154 AK5Q9Y6K8 562 aa8.53□□□□□ -1.04
PTPN12-211ENST00000481154 INPP5AQ14642 412 aa8.52□□□□□ -1.05
PTPN12-211ENST00000481154 CCDC85BQ15834 202 aaPredicted RBP8.52□□□□□ -1.05
PTPN12-211ENST00000481154 MAP3K11Q16584 847 aa8.52□□□□□ -1.05
PTPN12-211ENST00000481154 TTBK2Q6IQ55 1244 aa8.52□□□□□ -1.05
PTPN12-211ENST00000481154 ZNF574Q6ZN55 896 aaPredicted RBP8.52□□□□□ -1.05
PTPN12-211ENST00000481154 TP53INP2Q8IXH6 220 aa8.52□□□□□ -1.05
PTPN12-211ENST00000481154 GAL3ST3Q96A11 431 aa8.52□□□□□ -1.05
PTPN12-211ENST00000481154 ELMO3Q96BJ8 720 aa8.52□□□□□ -1.05
PTPN12-211ENST00000481154 PRAMEF27A3QJZ7 478 aa8.51□□□□□ -1.05
PTPN12-211ENST00000481154 CDK8P49336 464 aa8.51□□□□□ -1.05
PTPN12-211ENST00000481154 RING1Q06587 406 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms