RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 WDR18Q9BV38 432 aa13.62□□□□□ -0.23
CUL3-209ENST00000481135 TMPRSS13Q9BYE2 586 aa13.62□□□□□ -0.23
CUL3-209ENST00000481135 GINM1Q9NU53 330 aa13.62□□□□□ -0.23
CUL3-209ENST00000481135 DLGAP3O95886 979 aa13.61□□□□□ -0.23
CUL3-209ENST00000481135 SOX9P48436 509 aa13.61□□□□□ -0.23
CUL3-209ENST00000481135 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
CUL3-209ENST00000481135 WIPI1Q5MNZ9 446 aaPredicted RBP13.61□□□□□ -0.23
CUL3-209ENST00000481135 UBXN4Q92575 508 aa13.61□□□□□ -0.23
CUL3-209ENST00000481135 WISP1O95388 367 aa13.6□□□□□ -0.23
CUL3-209ENST00000481135 SSBP05455 408 aaKnown RBP eCLIP13.6□□□□□ -0.23
CUL3-209ENST00000481135 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.6□□□□□ -0.23
CUL3-209ENST00000481135 ALYREFQ86V81 257 aaKnown RBP13.6□□□□□ -0.23
CUL3-209ENST00000481135 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
CUL3-209ENST00000481135 TMEM130Q8N3G9 435 aa13.6□□□□□ -0.23
CUL3-209ENST00000481135 ARMC5Q96C12 935 aa13.6□□□□□ -0.23
CUL3-209ENST00000481135 WDR89Q96FK6 387 aaPredicted RBP13.6□□□□□ -0.23
CUL3-209ENST00000481135 TACC3Q9Y6A5 838 aa13.6□□□□□ -0.23
CUL3-209ENST00000481135 APBA3O96018 575 aa13.59□□□□□ -0.23
CUL3-209ENST00000481135 KIAA1211Q6ZU35 1233 aa13.59□□□□□ -0.23
CUL3-209ENST00000481135 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.59□□□□□ -0.23
CUL3-209ENST00000481135 CPLX3Q8WVH0 158 aa13.59□□□□□ -0.23
CUL3-209ENST00000481135 PLPPR2Q96GM1 343 aa13.59□□□□□ -0.23
CUL3-209ENST00000481135 USP21Q9UK80 565 aa13.59□□□□□ -0.23
CUL3-209ENST00000481135 FGRP09769 529 aa13.58□□□□□ -0.24
CUL3-209ENST00000481135 NRG1Q02297 640 aaPredicted RBP13.58□□□□□ -0.24
CUL3-209ENST00000481135 ID3Q02535 119 aa13.58□□□□□ -0.24
CUL3-209ENST00000481135 GRIK4Q16099 956 aa13.58□□□□□ -0.24
CUL3-209ENST00000481135 AKAP4Q5JQC9 854 aa13.58□□□□□ -0.24
CUL3-209ENST00000481135 SMG8Q8ND04 991 aaKnown RBP13.58□□□□□ -0.24
CUL3-209ENST00000481135 SUGCTQ9HAC7 445 aa13.58□□□□□ -0.24
CUL3-209ENST00000481135 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.24
CUL3-209ENST00000481135 PICK1Q9NRD5 415 aa13.58□□□□□ -0.24
CUL3-209ENST00000481135 C9orf172C9J069 976 aa13.57□□□□□ -0.24
CUL3-209ENST00000481135 INPP5AQ14642 412 aa13.57□□□□□ -0.24
CUL3-209ENST00000481135 ZC3H12AQ5D1E8 599 aaKnown RBP13.57□□□□□ -0.24
CUL3-209ENST00000481135 FDX2Q6P4F2 183 aa13.57□□□□□ -0.24
CUL3-209ENST00000481135 LRFN4Q6PJG9 635 aa13.57□□□□□ -0.24
CUL3-209ENST00000481135 MCF2L2Q86YR7 1114 aa13.57□□□□□ -0.24
CUL3-209ENST00000481135 LENG1Q96BZ8 264 aaPredicted RBP13.57□□□□□ -0.24
CUL3-209ENST00000481135 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
CUL3-209ENST00000481135 GFRA2O00451 464 aa13.56□□□□□ -0.24
CUL3-209ENST00000481135 IGSF3O75054 1194 aa13.56□□□□□ -0.24
CUL3-209ENST00000481135 IMPDH2P12268 514 aa13.56□□□□□ -0.24
CUL3-209ENST00000481135 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
CUL3-209ENST00000481135 PDE4BQ07343 736 aa13.56□□□□□ -0.24
CUL3-209ENST00000481135 ANKRD34AQ69YU3 496 aa13.56□□□□□ -0.24
CUL3-209ENST00000481135 FERD3LQ96RJ6 166 aa13.56□□□□□ -0.24
CUL3-209ENST00000481135 F8W735 103 aaPredicted RBP13.55□□□□□ -0.24
CUL3-209ENST00000481135 ERVK-24P63145 666 aa13.55□□□□□ -0.24
CUL3-209ENST00000481135 MLECQ14165 292 aa13.55□□□□□ -0.24
CUL3-209ENST00000481135 SHISA2Q6UWI4 295 aa13.55□□□□□ -0.24
CUL3-209ENST00000481135 C12orf50Q8NA57 414 aaPredicted RBP13.55□□□□□ -0.24
CUL3-209ENST00000481135 CRBNQ96SW2 442 aa13.55□□□□□ -0.24
CUL3-209ENST00000481135 ATXN3LQ9H3M9 355 aa13.55□□□□□ -0.24
CUL3-209ENST00000481135 AKTIPQ9H8T0 292 aa13.55□□□□□ -0.24
CUL3-209ENST00000481135 GK5Q6ZS86 529 aa13.54□□□□□ -0.24
CUL3-209ENST00000481135 CYFIP1Q7L576 1253 aa13.54□□□□□ -0.24
CUL3-209ENST00000481135 SRRTQ9BXP5 876 aaKnown RBP13.54□□□□□ -0.24
CUL3-209ENST00000481135 CEP41Q9BYV8 373 aa13.54□□□□□ -0.24
CUL3-209ENST00000481135 AP4E1Q9UPM8 1137 aa13.54□□□□□ -0.24
CUL3-209ENST00000481135 PCDHGC5Q9Y5F6 944 aa13.54□□□□□ -0.24
CUL3-209ENST00000481135 STK10O94804 968 aaKnown RBP13.53□□□□□ -0.24
CUL3-209ENST00000481135 SELPP16109 830 aa13.53□□□□□ -0.24
CUL3-209ENST00000481135 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
CUL3-209ENST00000481135 C12orf40Q86WS4 652 aa13.53□□□□□ -0.24
CUL3-209ENST00000481135 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
CUL3-209ENST00000481135 CRIM1Q9NZV1 1036 aa13.53□□□□□ -0.24
CUL3-209ENST00000481135 PCDHB14Q9Y5E9 798 aa13.53□□□□□ -0.24
CUL3-209ENST00000481135 PRAMEF27A3QJZ7 478 aa13.52□□□□□ -0.25
CUL3-209ENST00000481135 TMPRSS2O15393 492 aa13.52□□□□□ -0.25
CUL3-209ENST00000481135 ADH5P11766 374 aa13.52□□□□□ -0.25
CUL3-209ENST00000481135 CDK8P49336 464 aa13.52□□□□□ -0.25
CUL3-209ENST00000481135 FBXW10Q5XX13 1052 aa13.52□□□□□ -0.25
CUL3-209ENST00000481135 HIRIP3Q9BW71 556 aaPredicted RBP13.52□□□□□ -0.25
CUL3-209ENST00000481135 POLR3KQ9Y2Y1 108 aaPredicted RBP13.52□□□□□ -0.25
CUL3-209ENST00000481135 CSADQ9Y600 493 aa13.52□□□□□ -0.25
CUL3-209ENST00000481135 RNF225M0QZC1 329 aaPredicted RBP13.51□□□□□ -0.25
CUL3-209ENST00000481135 SART1O43290 800 aaKnown RBP13.51□□□□□ -0.25
CUL3-209ENST00000481135 GRIN3BO60391 1043 aa13.51□□□□□ -0.25
CUL3-209ENST00000481135 ATE1O95260 518 aa13.51□□□□□ -0.25
CUL3-209ENST00000481135 PPP1R9AQ9ULJ8 1098 aa13.51□□□□□ -0.25
CUL3-209ENST00000481135 HIF3AQ9Y2N7 669 aa13.51□□□□□ -0.25
CUL3-209ENST00000481135 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
CUL3-209ENST00000481135 FANCGO15287 622 aa13.5□□□□□ -0.25
CUL3-209ENST00000481135 COL8A1P27658 744 aa13.5□□□□□ -0.25
CUL3-209ENST00000481135 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
CUL3-209ENST00000481135 CLCQ05315 142 aa13.5□□□□□ -0.25
CUL3-209ENST00000481135 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
CUL3-209ENST00000481135 SOGA3Q5TF21 947 aa13.5□□□□□ -0.25
CUL3-209ENST00000481135 DYMQ7RTS9 669 aa13.5□□□□□ -0.25
CUL3-209ENST00000481135 AGGF1Q8N302 714 aaeCLIP13.5□□□□□ -0.25
CUL3-209ENST00000481135 DHX38Q92620 1227 aaKnown RBP13.5□□□□□ -0.25
CUL3-209ENST00000481135 ZNRF3Q9ULT6 936 aa13.5□□□□□ -0.25
CUL3-209ENST00000481135 PPT2Q9UMR5 302 aa13.5□□□□□ -0.25
CUL3-209ENST00000481135 PLCG1P19174 1290 aa13.49□□□□□ -0.25
CUL3-209ENST00000481135 ETF1P62495 437 aaKnown RBP13.49□□□□□ -0.25
CUL3-209ENST00000481135 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
CUL3-209ENST00000481135 OR6P1Q8NGX9 317 aa13.49□□□□□ -0.25
CUL3-209ENST00000481135 FANCD2OSQ96PS1 177 aa13.49□□□□□ -0.25
CUL3-209ENST00000481135 PIDD1Q9HB75 910 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms