RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 EPHA1P21709 976 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 NXPE4Q6UWF7 544 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 KRT27Q7Z3Y8 459 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 FRMD6Q96NE9 622 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 PLVAPQ9BX97 442 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 OSBPL7Q9BZF2 842 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 SH2B1Q9NRF2 756 aaPredicted RBP10.3□□□□□ -0.76
CBX3-206ENST00000481057 PARP2Q9UGN5 583 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 UBR1Q8IWV7 1749 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 CDC42BPBQ9Y5S2 1711 aa10.3□□□□□ -0.76
CBX3-206ENST00000481057 A0A096LPE4 126 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 GIPC1O14908 333 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 SPRED3Q2MJR0 410 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 DMRTC2Q8IXT2 367 aaPredicted RBP10.29□□□□□ -0.76
CBX3-206ENST00000481057 FOXD4L4Q8WXT5 416 aaPredicted RBP10.29□□□□□ -0.76
CBX3-206ENST00000481057 MUC3BQ9H195 1237 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 C19orf44Q9H6X5 657 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 C12orf49Q9H741 205 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 PPME1Q9Y570 386 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 PTCH1Q13635 1447 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 MROH1Q8NDA8 1641 aa10.29□□□□□ -0.76
CBX3-206ENST00000481057 TMEM238LA0A1B0GVL6 79 aa10.28□□□□□ -0.76
CBX3-206ENST00000481057 RBM47A0AV96 593 aaKnown RBP10.28□□□□□ -0.76
CBX3-206ENST00000481057 FAM177BA6PVY3 158 aa10.28□□□□□ -0.76
CBX3-206ENST00000481057 ZNF16P17020 682 aaPredicted RBP10.28□□□□□ -0.76
CBX3-206ENST00000481057 ITPKAP23677 461 aa10.28□□□□□ -0.76
CBX3-206ENST00000481057 ZNF326Q5BKZ1 582 aaKnown RBP10.28□□□□□ -0.76
CBX3-206ENST00000481057 TRAPPC3LQ5T215 181 aa10.28□□□□□ -0.76
CBX3-206ENST00000481057 DDX17Q92841 729 aaKnown RBP10.28□□□□□ -0.76
CBX3-206ENST00000481057 SRCIN1Q9C0H9 1055 aa10.28□□□□□ -0.76
CBX3-206ENST00000481057 NOP53Q9NZM5 478 aaKnown RBP10.28□□□□□ -0.76
CBX3-206ENST00000481057 ASXL1Q8IXJ9 1541 aa10.28□□□□□ -0.76
CBX3-206ENST00000481057 GLI3P10071 1580 aa10.27□□□□□ -0.76
CBX3-206ENST00000481057 SPDYE3A6NKU9 549 aa10.27□□□□□ -0.77
CBX3-206ENST00000481057 H3BRJ5 948 aa10.27□□□□□ -0.77
CBX3-206ENST00000481057 DAB2P98082 770 aa10.27□□□□□ -0.77
CBX3-206ENST00000481057 VN1R5Q7Z5H4 357 aa10.27□□□□□ -0.77
CBX3-206ENST00000481057 SHANK3Q9BYB0 1731 aa10.27□□□□□ -0.77
CBX3-206ENST00000481057 NCOA3Q9Y6Q9 1424 aa10.26□□□□□ -0.77
CBX3-206ENST00000481057 ARHGAP35Q9NRY4 1499 aa10.26□□□□□ -0.77
CBX3-206ENST00000481057 A0A0A0MRY4 1105 aa10.26□□□□□ -0.77
CBX3-206ENST00000481057 HNRNPMP52272 730 aaKnown RBP eCLIP10.26□□□□□ -0.77
CBX3-206ENST00000481057 FCGRTP55899 365 aa10.26□□□□□ -0.77
CBX3-206ENST00000481057 CABP4P57796 275 aa10.26□□□□□ -0.77
CBX3-206ENST00000481057 XPCQ01831 940 aaPredicted RBP10.26□□□□□ -0.77
CBX3-206ENST00000481057 PTPN12Q05209 780 aaKnown RBP10.26□□□□□ -0.77
CBX3-206ENST00000481057 TMC4Q7Z404 712 aa10.26□□□□□ -0.77
CBX3-206ENST00000481057 DTWD1Q8N5C7 304 aa10.26□□□□□ -0.77
CBX3-206ENST00000481057 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.26□□□□□ -0.77
CBX3-206ENST00000481057 DISP2A7MBM2 1401 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 LINC01387J3KSC0 135 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 RNF225M0QZC1 329 aaPredicted RBP10.25□□□□□ -0.77
CBX3-206ENST00000481057 EIF4BP23588 611 aaKnown RBP10.25□□□□□ -0.77
CBX3-206ENST00000481057 COL8A1P27658 744 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 PSMD2Q13200 908 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 TXNDC11Q6PKC3 985 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 C3orf58Q8NDZ4 430 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 FAM161BQ96MY7 647 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 CAMKK2Q96RR4 588 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 SYT17Q9BSW7 474 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 ZNF576Q9H609 170 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 SRA1Q9HD15 236 aaKnown RBP10.25□□□□□ -0.77
CBX3-206ENST00000481057 PPP4R2Q9NY27 417 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 FAM8A1Q9UBU6 413 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 AK5Q9Y6K8 562 aa10.25□□□□□ -0.77
CBX3-206ENST00000481057 XRCC5P13010 732 aaKnown RBP10.24□□□□□ -0.77
CBX3-206ENST00000481057 CDC25BP30305 580 aa10.24□□□□□ -0.77
CBX3-206ENST00000481057 RAC1P63000 192 aa10.24□□□□□ -0.77
CBX3-206ENST00000481057 DTHD1Q6ZMT9 781 aa10.24□□□□□ -0.77
CBX3-206ENST00000481057 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
CBX3-206ENST00000481057 CLEC4MQ9H2X3 399 aaPredicted RBP10.24□□□□□ -0.77
CBX3-206ENST00000481057 TET3O43151 1660 aa10.24□□□□□ -0.77
CBX3-206ENST00000481057 FAM229AH3BQW9 127 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 KIF3BO15066 747 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 DEAF1O75398 565 aaPredicted RBP10.23□□□□□ -0.77
CBX3-206ENST00000481057 USP17L7P0C7H9 530 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 GSTT1P30711 240 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 SETDB1Q15047 1291 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 NBPF8Q3BBV2 869 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 FAM117BQ6P1L5 589 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 MAP4K3Q8IVH8 894 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 CDK11AQ9UQ88 783 aaPredicted RBP10.23□□□□□ -0.77
CBX3-206ENST00000481057 TNS2Q63HR2 1409 aa10.23□□□□□ -0.77
CBX3-206ENST00000481057 RGPD1P0DJD0 1748 aa10.22□□□□□ -0.77
CBX3-206ENST00000481057 ESRRAP11474 423 aaPredicted RBP10.22□□□□□ -0.77
CBX3-206ENST00000481057 PCDH1Q08174 1060 aa10.22□□□□□ -0.77
CBX3-206ENST00000481057 IKBKEQ14164 716 aa10.22□□□□□ -0.77
CBX3-206ENST00000481057 PRRT3Q5FWE3 981 aa10.22□□□□□ -0.77
CBX3-206ENST00000481057 WNT8BQ93098 351 aa10.22□□□□□ -0.77
CBX3-206ENST00000481057 TMEM2Q9UHN6 1383 aa10.22□□□□□ -0.77
CBX3-206ENST00000481057 INO80Q9ULG1 1556 aaPredicted RBP10.22□□□□□ -0.77
CBX3-206ENST00000481057 FSCN2O14926 492 aa10.21□□□□□ -0.77
CBX3-206ENST00000481057 TRIM28Q13263 835 aaKnown RBP10.21□□□□□ -0.77
CBX3-206ENST00000481057 RPS26P11Q5JNZ5 115 aaPredicted RBP10.21□□□□□ -0.77
CBX3-206ENST00000481057 FBXO11Q86XK2 927 aa10.21□□□□□ -0.77
CBX3-206ENST00000481057 UNC5CLQ8IV45 518 aa10.21□□□□□ -0.77
CBX3-206ENST00000481057 CARD10Q9BWT7 1032 aa10.21□□□□□ -0.77
CBX3-206ENST00000481057 AATKQ6ZMQ8 1374 aa10.21□□□□□ -0.78
CBX3-206ENST00000481057 GPATCH8Q9UKJ3 1502 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms