RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 ZFPM1Q8IX07 1006 aa14.87□□□□□ -0.03
SHROOM3-205ENST00000481002 TEPSINQ96N21 525 aa14.87□□□□□ -0.03
SHROOM3-205ENST00000481002 ATP8A2Q9NTI2 1148 aa14.87□□□□□ -0.03
SHROOM3-205ENST00000481002 RPAP1Q9BWH6 1393 aaPredicted RBP14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 USP5P45974 858 aa14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 TCP10Q12799 353 aa14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 RUFY2Q8WXA3 655 aa14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 TMEM39BQ9GZU3 492 aa14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 COL2A1P02458 1487 aaPredicted RBP14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 NAV1Q8NEY1 1877 aa14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 FLT1P17948 1338 aa14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 PASKQ96RG2 1323 aa14.86□□□□□ -0.03
SHROOM3-205ENST00000481002 ATRNL1Q5VV63 1379 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 GSG1L2A8MUP6 293 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 PATL2C9JE40 543 aaKnown RBP14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 PRKAB2O43741 272 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 PICALMQ13492 652 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 GIMAP6Q6P9H5 292 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 DLK2Q6UY11 383 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 CCDC129Q6ZRS4 1044 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 SH3BP5LQ7L8J4 393 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 ZNF589Q86UQ0 364 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 MAPKAPK5Q8IW41 473 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 SDR42E1Q8WUS8 393 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 OSBPL5Q9H0X9 879 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 DCP1AQ9NPI6 582 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 SLC4A4Q9Y6R1 1079 aa14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
SHROOM3-205ENST00000481002 TRAF5O00463 557 aa14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 MFAP1P55081 439 aaKnown RBP14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 FMR1Q06787 632 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 SUPT20HL1Q3ZLR7 823 aa14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 NBPF12Q5TAG4 269 aaPredicted RBP14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 PRAMEF18Q5VWM3 479 aa14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 CDCA5Q96FF9 252 aa14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 DHX36Q9H2U1 1008 aaKnown RBP14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 CCDC171Q6TFL3 1326 aa14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 RAD50Q92878 1312 aa14.84□□□□□ -0.03
SHROOM3-205ENST00000481002 SIPA1L1O43166 1804 aa14.83□□□□□ -0.04
SHROOM3-205ENST00000481002 DDTLA6NHG4 134 aaPredicted RBP14.83□□□□□ -0.04
SHROOM3-205ENST00000481002 SGSM2O43147 1006 aa14.83□□□□□ -0.04
SHROOM3-205ENST00000481002 CDC45O75419 566 aa14.83□□□□□ -0.04
SHROOM3-205ENST00000481002 IL25Q9H293 177 aa14.83□□□□□ -0.04
SHROOM3-205ENST00000481002 FOXP2O15409 715 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 HSPD1P10809 573 aaKnown RBP14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 MAP3K10Q02779 954 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 ALX1Q15699 326 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 VPS53Q5VIR6 699 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 ZSCAN29Q8IWY8 852 aaPredicted RBP14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 CDAN1Q8IWY9 1227 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 IFNL3Q8IZI9 196 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 DDRGK1Q96HY6 314 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 ESYT1Q9BSJ8 1104 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 MCM9Q9NXL9 1143 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 PALD1Q9ULE6 856 aa14.82□□□□□ -0.04
SHROOM3-205ENST00000481002 APPP05067 770 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 NF2P35240 595 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 SBK1Q52WX2 424 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 CST9Q5W186 159 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 CASC1Q6TDU7 716 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 TTC6Q86TZ1 520 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 METTL16Q86W50 562 aaKnown RBP14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 HOOK2Q96ED9 719 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 CSRNP1Q96S65 589 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 EPB41L4AQ9HCS5 686 aaPredicted RBP14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 PI4KBQ9UBF8 816 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 SAP30BPQ9UHR5 308 aaKnown RBP14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 SSC5DA1L4H1 1573 aa14.81□□□□□ -0.04
SHROOM3-205ENST00000481002 USP17L12C9JPN9 530 aa14.8□□□□□ -0.04
SHROOM3-205ENST00000481002 USP17L21D6R901 530 aa14.8□□□□□ -0.04
SHROOM3-205ENST00000481002 TBC1D12O60347 775 aa14.8□□□□□ -0.04
SHROOM3-205ENST00000481002 CTR9Q6PD62 1173 aa14.8□□□□□ -0.04
SHROOM3-205ENST00000481002 FOXP4Q8IVH2 680 aaPredicted RBP14.8□□□□□ -0.04
SHROOM3-205ENST00000481002 DSCC1Q9BVC3 393 aa14.8□□□□□ -0.04
SHROOM3-205ENST00000481002 NACAP1Q9BZK3 213 aa14.8□□□□□ -0.04
SHROOM3-205ENST00000481002 LAMB1P07942 1786 aa14.8□□□□□ -0.04
SHROOM3-205ENST00000481002 CELF2O95319 508 aaKnown RBP14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 ZMYM6O95789 1325 aa14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 FGAP02671 866 aa14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 POLR3DP05423 398 aaPredicted RBP14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 HLA-DOAP06340 250 aa14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 PLCD1P51178 756 aa14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 C12orf60Q5U649 245 aa14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 EHD4Q9H223 541 aa14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 TAOK2Q9UL54 1235 aa14.79□□□□□ -0.04
SHROOM3-205ENST00000481002 MYH8P13535 1937 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 PAPPA2Q9BXP8 1791 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 PPP1R12BO60237 982 aaPredicted RBP14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 USP2O75604 605 aaPredicted RBP14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 TDO2P48775 406 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 FKBP1BP68106 108 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 MAP3K11Q16584 847 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 DCAF15Q66K64 600 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 MIGA2Q7L4E1 593 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 AMOTL1Q8IY63 956 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 NAPBQ9H115 298 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 ZNF408Q9H9D4 720 aa14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 GBA2Q9HCG7 927 aaPredicted RBP14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 ARPP21Q9UBL0 812 aaPredicted RBP14.78□□□□□ -0.04
SHROOM3-205ENST00000481002 HERC5Q9UII4 1024 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms