RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TNFAIP1Q13829 316 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 APOBEC3FQ8IUX4 373 aaKnown RBP14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 IFNL3Q8IZI9 196 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 TGFBRAP1Q8WUH2 860 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 DDRGK1Q96HY6 314 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 ARPP21Q9UBL0 812 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 FAM198AQ9UFP1 575 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 PGAP2Q9UHJ9 254 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 CNTNAP1P78357 1384 aa14.98□□□□□ -0.01
TRAPPC12-218ENST00000479897 CLRN2A0PK11 232 aa14.98□□□□□ -0.01
TRAPPC12-218ENST00000479897 SBK1Q52WX2 424 aa14.98□□□□□ -0.01
TRAPPC12-218ENST00000479897 RBM26Q5T8P6 1007 aaKnown RBP14.98□□□□□ -0.01
TRAPPC12-218ENST00000479897 NAPBQ9H115 298 aa14.98□□□□□ -0.01
TRAPPC12-218ENST00000479897 GGA3Q9NZ52 723 aa14.98□□□□□ -0.01
TRAPPC12-218ENST00000479897 TAOK2Q9UL54 1235 aa14.98□□□□□ -0.01
TRAPPC12-218ENST00000479897 MYH8P13535 1937 aa14.98□□□□□ -0.01
TRAPPC12-218ENST00000479897 SEC24BO95487 1268 aa14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 FGAP02671 866 aa14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 TNNI2P48788 182 aa14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 MAPKAPK5Q8IW41 473 aa14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 FAM151AQ8WW52 585 aa14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 USP26Q9BXU7 913 aa14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 DHX36Q9H2U1 1008 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 CTNNA3Q9UI47 895 aa14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 PPP2R3BQ9Y5P8 575 aa14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 RBM8AQ9Y5S9 174 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-218ENST00000479897 ASTN2O75129 1339 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC12-218ENST00000479897 APPP05067 770 aa14.96□□□□□ -0.01
TRAPPC12-218ENST00000479897 TDO2P48775 406 aa14.96□□□□□ -0.01
TRAPPC12-218ENST00000479897 CACNB3P54284 484 aa14.96□□□□□ -0.01
TRAPPC12-218ENST00000479897 NECTIN1Q15223 517 aa14.96□□□□□ -0.01
TRAPPC12-218ENST00000479897 ANGEL2Q5VTE6 544 aaKnown RBP14.96□□□□□ -0.01
TRAPPC12-218ENST00000479897 VEZTQ9HBM0 779 aa14.96□□□□□ -0.01
TRAPPC12-218ENST00000479897 ANAPC4Q9UJX5 808 aa14.96□□□□□ -0.01
TRAPPC12-218ENST00000479897 HSPA4P34932 840 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 PICALMQ13492 652 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 CTR9Q6PD62 1173 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 AMOTL1Q8IY63 956 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 KCNB2Q92953 911 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 IL17RAQ96F46 866 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 EHD4Q9H223 541 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 RRAGCQ9HB90 399 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 NMRK2Q9NPI5 230 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 MCM9Q9NXL9 1143 aa14.95□□□□□ -0.02
TRAPPC12-218ENST00000479897 PAPPA2Q9BXP8 1791 aa14.94□□□□□ -0.02
TRAPPC12-218ENST00000479897 TCP10L2B9ZVM9 353 aa14.94□□□□□ -0.02
TRAPPC12-218ENST00000479897 USP17L12C9JPN9 530 aa14.94□□□□□ -0.02
TRAPPC12-218ENST00000479897 USP17L21D6R901 530 aa14.94□□□□□ -0.02
TRAPPC12-218ENST00000479897 IMMTQ16891 758 aaKnown RBP14.94□□□□□ -0.02
TRAPPC12-218ENST00000479897 C12orf60Q5U649 245 aa14.94□□□□□ -0.02
TRAPPC12-218ENST00000479897 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
TRAPPC12-218ENST00000479897 HLA-DOAP06340 250 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 CYP21A2P08686 494 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 PCP11498 1178 aaKnown RBP14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 MCCP23508 829 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 PPARAQ07869 468 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 RASA3Q14644 834 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 TSGA10IPQ3SY00 556 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 RNF20Q5VTR2 975 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 CREB3L3Q68CJ9 461 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 TTC6Q86TZ1 520 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 METTL16Q86W50 562 aaKnown RBP14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 LDHDQ86WU2 507 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 DCPSQ96C86 337 aaKnown RBP14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 TEPSINQ96N21 525 aa14.93□□□□□ -0.02
TRAPPC12-218ENST00000479897 GREB1LQ9C091 1923 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 DDTLA6NHG4 134 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 SLC27A2O14975 620 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 FGRP09769 529 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 RBM25P49756 843 aaKnown RBP14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 NT5C2P49902 561 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 ANAPC15P60006 121 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 GABPAQ06546 454 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 TCP10Q12799 353 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 EAPPQ56P03 285 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 ZFPM1Q8IX07 1006 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 NBPF3Q9H094 633 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 DEFB129Q9H1M3 183 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 PALD1Q9ULE6 856 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 SSC5DA1L4H1 1573 aa14.92□□□□□ -0.02
TRAPPC12-218ENST00000479897 ZNF213O14771 459 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 POLR3DP05423 398 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 MAP3K10Q02779 954 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 C16orf86Q6ZW13 317 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 SULF1Q8IWU6 871 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 STAG1Q8WVM7 1258 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 CSRNP1Q96S65 589 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 TMEM39BQ9GZU3 492 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 GPBP1L1Q9HC44 474 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 PI4KBQ9UBF8 816 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 SAP30BPQ9UHR5 308 aaKnown RBP14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 HERC5Q9UII4 1024 aaKnown RBP14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 SERPINB13Q9UIV8 391 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 TRPM7Q96QT4 1865 aa14.91□□□□□ -0.02
TRAPPC12-218ENST00000479897 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
TRAPPC12-218ENST00000479897 TBC1D12O60347 775 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms