RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 OS9Q13438 667 aaPredicted RBP10.88□□□□□ -0.67
DDX56-211ENST00000479602 CCL15Q16663 113 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 CDC42EP5Q6NZY7 148 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 C17orf99Q6UX52 265 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 VPS37DQ86XT2 251 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 FAM151AQ8WW52 585 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 ZKSCAN4Q969J2 545 aaPredicted RBP10.88□□□□□ -0.67
DDX56-211ENST00000479602 FAM163AQ96GL9 167 aaPredicted RBP10.88□□□□□ -0.67
DDX56-211ENST00000479602 XAGE2Q96GT9 111 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 ZNF333Q96JL9 665 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 EFCC1Q9HA90 598 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 PPP4R2Q9NY27 417 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 DENND2AQ9ULE3 1009 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 KCNH4Q9UQ05 1017 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 BTBD19C9JJ37 291 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 PPATQ06203 517 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 NFIAQ12857 509 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 PPIL2Q13356 520 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 CCDC102BQ68D86 513 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 ZGPATQ8N5A5 531 aaKnown RBP10.87□□□□□ -0.67
DDX56-211ENST00000479602 ZFYVE28Q9HCC9 887 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 FAM198AQ9UFP1 575 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 DAGLAQ9Y4D2 1042 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.87□□□□□ -0.67
DDX56-211ENST00000479602 ATRNL1Q5VV63 1379 aa10.87□□□□□ -0.67
DDX56-211ENST00000479602 MAST3O60307 1309 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 ADGRA2Q96PE1 1338 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 PHF20L1A8MW92 1017 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 IGHDP01880 384 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 CETPP11597 493 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 ATP5JP18859 108 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 CTGFP29279 349 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 PRDX5P30044 214 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 INPP5BP32019 993 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 CCDC158Q5M9N0 1113 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 NOL9Q5SY16 702 aaKnown RBP10.86□□□□□ -0.67
DDX56-211ENST00000479602 CHD1LQ86WJ1 897 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 ZFPM1Q8IX07 1006 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 HOOK2Q96ED9 719 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 OTUD5Q96G74 571 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 IDI2Q9BXS1 227 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 CSADQ9Y600 493 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
DDX56-211ENST00000479602 EN2P19622 333 aaPredicted RBP10.85□□□□□ -0.67
DDX56-211ENST00000479602 SNAPC2Q13487 334 aa10.85□□□□□ -0.67
DDX56-211ENST00000479602 TAF1CQ15572 869 aaPredicted RBP10.85□□□□□ -0.67
DDX56-211ENST00000479602 DIXDC1Q155Q3 683 aa10.85□□□□□ -0.67
DDX56-211ENST00000479602 MIGA2Q7L4E1 593 aa10.85□□□□□ -0.67
DDX56-211ENST00000479602 SH3BP5LQ7L8J4 393 aa10.85□□□□□ -0.67
DDX56-211ENST00000479602 AACSQ86V21 672 aa10.85□□□□□ -0.67
DDX56-211ENST00000479602 GPATCH3Q96I76 525 aa10.85□□□□□ -0.67
DDX56-211ENST00000479602 WRNIP1Q96S55 665 aa10.85□□□□□ -0.67
DDX56-211ENST00000479602 ZNF341Q9BYN7 854 aa10.85□□□□□ -0.67
DDX56-211ENST00000479602 GAKO14976 1311 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 ERC2O15083 957 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 FRAT2O75474 233 aaPredicted RBP10.84□□□□□ -0.67
DDX56-211ENST00000479602 MAP4K4O95819 1239 aaPredicted RBP10.84□□□□□ -0.67
DDX56-211ENST00000479602 GNRH1P01148 92 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 IFIT2P09913 472 aaKnown RBP10.84□□□□□ -0.67
DDX56-211ENST00000479602 PHKA1P46020 1223 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 TIMM10P62072 90 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 LACTBP83111 547 aaPredicted RBP10.84□□□□□ -0.67
DDX56-211ENST00000479602 RASGRF1Q13972 1273 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 DCAF15Q66K64 600 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 GPAT2Q6NUI2 795 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 ANKRD23Q86SG2 305 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 CERS3Q8IU89 383 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 ZNF384Q8TF68 577 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 DBNDD2Q9BQY9 259 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 ARHGAP39Q9C0H5 1083 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 ECHDC1Q9NTX5 307 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 PTCH2Q9Y6C5 1203 aa10.84□□□□□ -0.67
DDX56-211ENST00000479602 TRIOBPQ9H2D6 2365 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 OTOFQ9HC10 1997 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 CXCL11O14625 94 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
DDX56-211ENST00000479602 GLRX3O76003 335 aaKnown RBP10.83□□□□□ -0.68
DDX56-211ENST00000479602 MX1P20591 662 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 ADORA1P30542 326 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 ARHGEF6Q15052 776 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 TTF1Q15361 905 aaPredicted RBP10.83□□□□□ -0.68
DDX56-211ENST00000479602 SPATA5Q8NB90 893 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 PI4K2BQ8TCG2 481 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 HAUS7Q99871 368 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 USP40Q9NVE5 1235 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 TMOD2Q9NZR1 351 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
DDX56-211ENST00000479602 MYH7P12883 1935 aa10.83□□□□□ -0.68
DDX56-211ENST00000479602 ENTPD3O75355 529 aa10.82□□□□□ -0.68
DDX56-211ENST00000479602 WDHD1O75717 1129 aaPredicted RBP10.82□□□□□ -0.68
DDX56-211ENST00000479602 LDHBP07195 334 aaKnown RBP10.82□□□□□ -0.68
DDX56-211ENST00000479602 BCRP11274 1271 aa10.82□□□□□ -0.68
DDX56-211ENST00000479602 MCAMP43121 646 aa10.82□□□□□ -0.68
DDX56-211ENST00000479602 PRMT2P55345 433 aa10.82□□□□□ -0.68
DDX56-211ENST00000479602 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
DDX56-211ENST00000479602 SPTY2D1Q68D10 685 aaPredicted RBP10.82□□□□□ -0.68
DDX56-211ENST00000479602 IL1RAPL2Q9NP60 686 aa10.82□□□□□ -0.68
DDX56-211ENST00000479602 TLR7Q9NYK1 1049 aaKnown RBP10.82□□□□□ -0.68
DDX56-211ENST00000479602 HMG20BQ9P0W2 317 aa10.82□□□□□ -0.68
DDX56-211ENST00000479602 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms