RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CBFA2T2O43439 604 aa28.41■■■□□ 2.14
SYNGAP1-206ENST00000479510 IFNAR1P17181 557 aa28.41■■■□□ 2.14
SYNGAP1-206ENST00000479510 SFPQP23246 707 aaKnown RBP eCLIP28.41■■■□□ 2.14
SYNGAP1-206ENST00000479510 UBN2Q6ZU65 1347 aa28.41■■■□□ 2.14
SYNGAP1-206ENST00000479510 AKNAD1Q5T1N1 836 aa28.41■■■□□ 2.14
SYNGAP1-206ENST00000479510 DZIP3Q86Y13 1208 aaKnown RBP28.41■■■□□ 2.14
SYNGAP1-206ENST00000479510 PNPLA7Q6ZV29 1317 aa28.4■■■□□ 2.14
SYNGAP1-206ENST00000479510 BIN1O00499 593 aa28.4■■■□□ 2.14
SYNGAP1-206ENST00000479510 PHKBQ93100 1093 aa28.4■■■□□ 2.14
SYNGAP1-206ENST00000479510 NOL10Q9BSC4 688 aaKnown RBP28.4■■■□□ 2.14
SYNGAP1-206ENST00000479510 IFIT3O14879 490 aaKnown RBP28.39■■■□□ 2.14
SYNGAP1-206ENST00000479510 RANBP6O60518 1105 aaKnown RBP28.39■■■□□ 2.14
SYNGAP1-206ENST00000479510 TMC6Q7Z403 805 aa28.39■■■□□ 2.14
SYNGAP1-206ENST00000479510 NKX2-3Q8TAU0 364 aa28.39■■■□□ 2.14
SYNGAP1-206ENST00000479510 NACAP1Q9BZK3 213 aa28.39■■■□□ 2.14
SYNGAP1-206ENST00000479510 EPB41L4AQ9HCS5 686 aaPredicted RBP28.39■■■□□ 2.14
SYNGAP1-206ENST00000479510 ECM29Q5VYK3 1845 aa28.39■■■□□ 2.14
SYNGAP1-206ENST00000479510 CCP110O43303 1012 aa28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 HSPA2P54652 639 aa28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 FANCCQ00597 558 aa28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 MYL5Q02045 173 aa28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 ARMCX5Q6P1M9 558 aa28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 STAG1Q8WVM7 1258 aa28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 SENP2Q9HC62 589 aa28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 ZSWIM5Q9P217 1185 aa28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 HOOK1Q9UJC3 728 aaKnown RBP28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 MYO5AQ9Y4I1 1855 aaKnown RBP28.39■■■□□ 2.13
SYNGAP1-206ENST00000479510 MBD4O95243 580 aa28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 SART3Q15020 963 aaKnown RBP28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 TMTC2Q8N394 836 aa28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 SAFBQ15424 915 aaKnown RBP eCLIP28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 MFSD6Q6ZSS7 791 aa28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 NOSTRINQ8IVI9 506 aa28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 MAGEB6Q8N7X4 407 aa28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 ZNF592Q92610 1267 aa28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 ARID3AQ99856 593 aa28.38■■■□□ 2.13
SYNGAP1-206ENST00000479510 RTL9Q8NET4 1388 aa28.37■■■□□ 2.13
SYNGAP1-206ENST00000479510 RASGRF1Q13972 1273 aa28.37■■■□□ 2.13
SYNGAP1-206ENST00000479510 OLFM4Q6UX06 510 aa28.37■■■□□ 2.13
SYNGAP1-206ENST00000479510 KRI1Q8N9T8 703 aaKnown RBP28.37■■■□□ 2.13
SYNGAP1-206ENST00000479510 PLCH1Q4KWH8 1693 aa28.37■■■□□ 2.13
SYNGAP1-206ENST00000479510 RXRAP19793 462 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 KRBA2Q6ZNG9 492 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 TRIM22Q8IYM9 498 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 ERO1AQ96HE7 468 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 CCDC196A0A1B0GTZ2 297 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 GSG1L2A8MUP6 293 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 E4F1Q66K89 784 aaPredicted RBP28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 SLC26A6Q9BXS9 759 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 HSD3B7Q9H2F3 369 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 FOXP1Q9H334 677 aaPredicted RBP28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 BTG4Q9NY30 223 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 KCNH3Q9ULD8 1083 aa28.36■■■□□ 2.13
SYNGAP1-206ENST00000479510 CHD4Q14839 1912 aa28.35■■■□□ 2.13
SYNGAP1-206ENST00000479510 MMP1P03956 469 aa28.35■■■□□ 2.13
SYNGAP1-206ENST00000479510 MPHOSPH8Q99549 860 aa28.34■■■□□ 2.13
SYNGAP1-206ENST00000479510 RNF41Q9H4P4 317 aaPredicted RBP28.34■■■□□ 2.13
SYNGAP1-206ENST00000479510 TRMT1Q9NXH9 659 aaKnown RBP28.34■■■□□ 2.13
SYNGAP1-206ENST00000479510 COL14A1Q05707 1796 aaKnown RBP28.34■■■□□ 2.13
SYNGAP1-206ENST00000479510 MORC2Q9Y6X9 1032 aaPredicted RBP28.34■■■□□ 2.13
SYNGAP1-206ENST00000479510 LMOD1P29536 600 aaPredicted RBP28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 RILPL1Q5EBL4 403 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 UTP14CQ5TAP6 766 aaKnown RBP28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 EIF5P55010 431 aaKnown RBP28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 CTDSPL2Q05D32 466 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 PPP2R5BQ15173 497 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 RTN1Q16799 776 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 PARP10Q53GL7 1025 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 METTL16Q86W50 562 aaKnown RBP28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 ZNF579Q8NAF0 562 aaKnown RBP28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 CNNM3Q8NE01 707 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 PPP1R13BQ96KQ4 1090 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 ARMT1Q9H993 441 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 OGFRQ9NZT2 677 aa28.33■■■□□ 2.13
SYNGAP1-206ENST00000479510 ERICH2A1L162 156 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 DEXIO95424 95 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 PNOCQ13519 176 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 WTAPQ15007 396 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 HELBQ8NG08 1087 aaPredicted RBP28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 UTP14AQ9BVJ6 771 aaKnown RBP28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 L2HGDHQ9H9P8 463 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 EXOC5O00471 708 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 SLU7O95391 586 aaKnown RBP28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 UBASH3AP57075 661 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 CLIC6Q96NY7 704 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 BCORQ6W2J9 1755 aa28.31■■■□□ 2.12
SYNGAP1-206ENST00000479510 PTPREP23469 700 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 TDO2P48775 406 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 CBX1P83916 185 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 LONRF3Q496Y0 759 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 CCDC152Q4G0S7 254 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 FCHSD1Q86WN1 690 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 MYL10Q9BUA6 226 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 SLIT2O94813 1529 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 MDM2Q00987 491 aaPredicted RBP28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 NT5DC1Q5TFE4 455 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 GTPBP4Q9BZE4 634 aaKnown RBP28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 DACH1Q9UI36 760 aa28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 ZNF215Q9UL58 517 aaPredicted RBP28.3■■■□□ 2.12
SYNGAP1-206ENST00000479510 CEP131Q9UPN4 1083 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms