RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 FPGT-TNNI3KV9GXZ4 949 aa11.13□□□□□ -0.63
CMTM1-208ENST00000479381 MANSC4A6NHS7 340 aaPredicted RBP11.12□□□□□ -0.63
CMTM1-208ENST00000479381 LDHCP07864 332 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 BTDP43251 543 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 DGKZQ13574 1117 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 OTUD7BQ6GQQ9 843 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 AACSQ86V21 672 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 SSH3Q8TE77 659 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 WNK4Q96J92 1243 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 CLMNQ96JQ2 1002 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 WRNIP1Q96S55 665 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 CSRNP1Q96S65 589 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 SAGE1Q9NXZ1 904 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
CMTM1-208ENST00000479381 SALL1Q9NSC2 1324 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 POTEFA5A3E0 1075 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 USP2O75604 605 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-208ENST00000479381 WDHD1O75717 1129 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-208ENST00000479381 TBC1D8O95759 1140 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
CMTM1-208ENST00000479381 CDC42EP5Q6NZY7 148 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 PI16Q6UXB8 463 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 TRIM34Q9BYJ4 488 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 IL1RAPL2Q9NP60 686 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 SSC5DA1L4H1 1573 aa11.11□□□□□ -0.63
CMTM1-208ENST00000479381 MROH7-TTC4A0A0A0MT08 1334 aa11.1□□□□□ -0.63
CMTM1-208ENST00000479381 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
CMTM1-208ENST00000479381 IFIT2P09913 472 aaKnown RBP11.1□□□□□ -0.63
CMTM1-208ENST00000479381 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-208ENST00000479381 NAA16Q6N069 864 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-208ENST00000479381 CDAN1Q8IWY9 1227 aa11.1□□□□□ -0.63
CMTM1-208ENST00000479381 CLASRPQ8N2M8 674 aaKnown RBP11.1□□□□□ -0.63
CMTM1-208ENST00000479381 EFCAB3Q8N7B9 438 aa11.1□□□□□ -0.63
CMTM1-208ENST00000479381 FAM151AQ8WW52 585 aa11.1□□□□□ -0.63
CMTM1-208ENST00000479381 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
CMTM1-208ENST00000479381 IDH1O75874 414 aaKnown RBP11.09□□□□□ -0.63
CMTM1-208ENST00000479381 BAG3O95817 575 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 ARID4AP29374 1257 aaPredicted RBP11.09□□□□□ -0.63
CMTM1-208ENST00000479381 MCAMP43121 646 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 RGS3P49796 1198 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 MECOMQ03112 1051 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 NFIAQ12857 509 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 VGLL4Q14135 290 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 MAP3K11Q16584 847 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 LDLRAD1Q5T700 205 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 RPAP2Q8IXW5 612 aaPredicted RBP11.09□□□□□ -0.63
CMTM1-208ENST00000479381 GPR108Q9NPR9 543 aa11.09□□□□□ -0.63
CMTM1-208ENST00000479381 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.09□□□□□ -0.63
CMTM1-208ENST00000479381 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
CMTM1-208ENST00000479381 OTOFQ9HC10 1997 aa11.08□□□□□ -0.64
CMTM1-208ENST00000479381 PCNTO95613 3336 aa11.08□□□□□ -0.64
CMTM1-208ENST00000479381 INHBEP58166 350 aa11.08□□□□□ -0.64
CMTM1-208ENST00000479381 FKBP1CQ5VVH2 108 aa11.08□□□□□ -0.64
CMTM1-208ENST00000479381 TEX11Q8IYF3 940 aa11.08□□□□□ -0.64
CMTM1-208ENST00000479381 KIF1BPQ96EK5 621 aa11.08□□□□□ -0.64
CMTM1-208ENST00000479381 AATFQ9NY61 560 aaKnown RBP eCLIP11.08□□□□□ -0.64
CMTM1-208ENST00000479381 TLR7Q9NYK1 1049 aaKnown RBP11.08□□□□□ -0.64
CMTM1-208ENST00000479381 DOCK2Q92608 1830 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 RPAP1Q9BWH6 1393 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-208ENST00000479381 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 UNCXA6NJT0 531 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 ZAP70P43403 619 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 GTF2A2P52657 109 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 PDE3AQ14432 1141 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 CCL15Q16663 113 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.07□□□□□ -0.64
CMTM1-208ENST00000479381 RHPN1Q8TCX5 695 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 ZKSCAN4Q969J2 545 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-208ENST00000479381 ABHD8Q96I13 439 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 TEPSINQ96N21 525 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 DNAJC2Q99543 621 aaKnown RBP11.07□□□□□ -0.64
CMTM1-208ENST00000479381 MCOLN1Q9GZU1 580 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 PICK1Q9NRD5 415 aa11.07□□□□□ -0.64
CMTM1-208ENST00000479381 DBNLQ9UJU6 430 aaKnown RBP11.07□□□□□ -0.64
CMTM1-208ENST00000479381 NOP58Q9Y2X3 529 aaKnown RBP11.07□□□□□ -0.64
CMTM1-208ENST00000479381 MAST2Q6P0Q8 1798 aa11.06□□□□□ -0.64
CMTM1-208ENST00000479381 ENTPD3O75355 529 aa11.06□□□□□ -0.64
CMTM1-208ENST00000479381 CYP7A1P22680 504 aa11.06□□□□□ -0.64
CMTM1-208ENST00000479381 USP5P45974 858 aa11.06□□□□□ -0.64
CMTM1-208ENST00000479381 TM4SF4P48230 202 aa11.06□□□□□ -0.64
CMTM1-208ENST00000479381 TAF1CQ15572 869 aaPredicted RBP11.06□□□□□ -0.64
CMTM1-208ENST00000479381 C20orf194Q5TEA3 1177 aa11.06□□□□□ -0.64
CMTM1-208ENST00000479381 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
CMTM1-208ENST00000479381 EAF2Q96CJ1 260 aaPredicted RBP11.06□□□□□ -0.64
CMTM1-208ENST00000479381 GAKO14976 1311 aa11.06□□□□□ -0.64
CMTM1-208ENST00000479381 GPR25O00155 361 aa11.05□□□□□ -0.64
CMTM1-208ENST00000479381 FKTNO75072 461 aa11.05□□□□□ -0.64
CMTM1-208ENST00000479381 RAB11FIP3O75154 756 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms