RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ZNF532Q9HCE3 1301 aa24.78■■□□□ 1.56
VARS-224ENST00000479051 AK9Q5TCS8 1911 aa24.78■■□□□ 1.56
VARS-224ENST00000479051 MAGEB6P1A0A0J9YX57 407 aa24.77■■□□□ 1.56
VARS-224ENST00000479051 USP2O75604 605 aaPredicted RBP24.77■■□□□ 1.56
VARS-224ENST00000479051 LDLRAD1Q5T700 205 aa24.77■■□□□ 1.56
VARS-224ENST00000479051 ANKRD13AQ8IZ07 590 aa24.77■■□□□ 1.56
VARS-224ENST00000479051 PI4K2BQ8TCG2 481 aa24.77■■□□□ 1.56
VARS-224ENST00000479051 DDX4Q9NQI0 724 aaKnown RBP24.77■■□□□ 1.56
VARS-224ENST00000479051 STAP2Q9UGK3 403 aa24.77■■□□□ 1.56
VARS-224ENST00000479051 ADD2P35612 726 aa24.76■■□□□ 1.55
VARS-224ENST00000479051 MAP2K2P36507 400 aa24.76■■□□□ 1.55
VARS-224ENST00000479051 PDE1AP54750 535 aa24.76■■□□□ 1.55
VARS-224ENST00000479051 ZFPM1Q8IX07 1006 aa24.76■■□□□ 1.55
VARS-224ENST00000479051 KBTBD3Q8NAB2 608 aa24.76■■□□□ 1.55
VARS-224ENST00000479051 CSRNP1Q96S65 589 aa24.76■■□□□ 1.55
VARS-224ENST00000479051 ZNF341Q9BYN7 854 aa24.76■■□□□ 1.55
VARS-224ENST00000479051 OSBPL5Q9H0X9 879 aaPredicted RBP24.76■■□□□ 1.55
VARS-224ENST00000479051 FZD1Q9UP38 647 aa24.76■■□□□ 1.55
VARS-224ENST00000479051 SLC10A3P09131 477 aa24.75■■□□□ 1.55
VARS-224ENST00000479051 DYNLL1P63167 89 aaKnown RBP24.75■■□□□ 1.55
VARS-224ENST00000479051 UBE3CQ15386 1083 aa24.75■■□□□ 1.55
VARS-224ENST00000479051 TGFBRAP1Q8WUH2 860 aa24.75■■□□□ 1.55
VARS-224ENST00000479051 SLC10A4Q96EP9 437 aa24.75■■□□□ 1.55
VARS-224ENST00000479051 COL2A1P02458 1487 aaPredicted RBP24.75■■□□□ 1.55
VARS-224ENST00000479051 TCRBV5S4A2TA0A5A2 114 aa24.74■■□□□ 1.55
VARS-224ENST00000479051 USP5P45974 858 aa24.74■■□□□ 1.55
VARS-224ENST00000479051 RASAL3Q86YV0 1011 aa24.74■■□□□ 1.55
VARS-224ENST00000479051 CSADQ9Y600 493 aa24.74■■□□□ 1.55
VARS-224ENST00000479051 ATRNL1Q5VV63 1379 aa24.73■■□□□ 1.55
VARS-224ENST00000479051 ZFYP08048 801 aaPredicted RBP24.73■■□□□ 1.55
VARS-224ENST00000479051 MAP3K9P80192 1104 aa24.73■■□□□ 1.55
VARS-224ENST00000479051 MIGA2Q7L4E1 593 aa24.73■■□□□ 1.55
VARS-224ENST00000479051 DHX36Q9H2U1 1008 aaKnown RBP24.73■■□□□ 1.55
VARS-224ENST00000479051 MYH7P12883 1935 aa24.73■■□□□ 1.55
VARS-224ENST00000479051 FLT1P17948 1338 aa24.72■■□□□ 1.55
VARS-224ENST00000479051 AOC2O75106 756 aa24.72■■□□□ 1.55
VARS-224ENST00000479051 MAP2K1Q02750 393 aaPredicted RBP24.72■■□□□ 1.55
VARS-224ENST00000479051 MAPKAPK5Q8IW41 473 aa24.72■■□□□ 1.55
VARS-224ENST00000479051 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.72■■□□□ 1.55
VARS-224ENST00000479051 WRNIP1Q96S55 665 aa24.72■■□□□ 1.55
VARS-224ENST00000479051 RIOK1Q9BRS2 568 aaKnown RBP24.72■■□□□ 1.55
VARS-224ENST00000479051 FSD1Q9BTV5 496 aa24.72■■□□□ 1.55
VARS-224ENST00000479051 CRNKL1Q9BZJ0 848 aaKnown RBP24.72■■□□□ 1.55
VARS-224ENST00000479051 DDTLA6NHG4 134 aaPredicted RBP24.71■■□□□ 1.55
VARS-224ENST00000479051 FAM155AB1AL88 458 aaPredicted RBP24.71■■□□□ 1.55
VARS-224ENST00000479051 SH3BP5LQ7L8J4 393 aa24.71■■□□□ 1.55
VARS-224ENST00000479051 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.71■■□□□ 1.55
VARS-224ENST00000479051 THSD7BQ9C0I4 1608 aa24.71■■□□□ 1.55
VARS-224ENST00000479051 REM2Q8IYK8 340 aaPredicted RBP24.7■■□□□ 1.54
VARS-224ENST00000479051 BEGAINQ9BUH8 593 aa24.7■■□□□ 1.54
VARS-224ENST00000479051 RNF113AO15541 343 aaKnown RBP24.69■■□□□ 1.54
VARS-224ENST00000479051 HLA-DOAP06340 250 aa24.69■■□□□ 1.54
VARS-224ENST00000479051 AIDAQ96BJ3 306 aa24.69■■□□□ 1.54
VARS-224ENST00000479051 EVI5LQ96CN4 794 aa24.69■■□□□ 1.54
VARS-224ENST00000479051 CLMNQ96JQ2 1002 aa24.69■■□□□ 1.54
VARS-224ENST00000479051 PI4KBQ9UBF8 816 aa24.69■■□□□ 1.54
VARS-224ENST00000479051 FOCADQ5VW36 1801 aa24.68■■□□□ 1.54
VARS-224ENST00000479051 MBD4O95243 580 aa24.68■■□□□ 1.54
VARS-224ENST00000479051 VGLL4Q14135 290 aa24.68■■□□□ 1.54
VARS-224ENST00000479051 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.68■■□□□ 1.54
VARS-224ENST00000479051 PLEKHM2Q8IWE5 1019 aa24.68■■□□□ 1.54
VARS-224ENST00000479051 APPBP2Q92624 585 aa24.68■■□□□ 1.54
VARS-224ENST00000479051 TRIM34Q9BYJ4 488 aa24.68■■□□□ 1.54
VARS-224ENST00000479051 OSBPL3Q9H4L5 887 aa24.68■■□□□ 1.54
VARS-224ENST00000479051 ELP3Q9H9T3 547 aa24.68■■□□□ 1.54
VARS-224ENST00000479051 CDK5RAP2Q96SN8 1893 aa24.67■■□□□ 1.54
VARS-224ENST00000479051 TBC1D12O60347 775 aa24.67■■□□□ 1.54
VARS-224ENST00000479051 ZBTB48P10074 688 aaPredicted RBP24.67■■□□□ 1.54
VARS-224ENST00000479051 KIF23Q02241 960 aaPredicted RBP24.67■■□□□ 1.54
VARS-224ENST00000479051 SPRYD7Q5W111 196 aa24.67■■□□□ 1.54
VARS-224ENST00000479051 LCORLQ8N3X6 602 aa24.67■■□□□ 1.54
VARS-224ENST00000479051 ARMT1Q9H993 441 aa24.67■■□□□ 1.54
VARS-224ENST00000479051 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.67■■□□□ 1.54
VARS-224ENST00000479051 HERC5Q9UII4 1024 aaKnown RBP24.67■■□□□ 1.54
VARS-224ENST00000479051 OTOFQ9HC10 1997 aa24.66■■□□□ 1.54
VARS-224ENST00000479051 MAP3K10Q02779 954 aa24.66■■□□□ 1.54
VARS-224ENST00000479051 SLFNL1Q499Z3 407 aa24.66■■□□□ 1.54
VARS-224ENST00000479051 CRACR2BQ8N4Y2 399 aaPredicted RBP24.66■■□□□ 1.54
VARS-224ENST00000479051 DDRGK1Q96HY6 314 aa24.66■■□□□ 1.54
VARS-224ENST00000479051 WNK4Q96J92 1243 aa24.66■■□□□ 1.54
VARS-224ENST00000479051 SAP30BPQ9UHR5 308 aaKnown RBP24.66■■□□□ 1.54
VARS-224ENST00000479051 ZNF112Q9UJU3 913 aa24.66■■□□□ 1.54
VARS-224ENST00000479051 TRIM6-TRIM34B2RNG4 842 aa24.65■■□□□ 1.54
VARS-224ENST00000479051 MKRN3Q13064 507 aaKnown RBP24.65■■□□□ 1.54
VARS-224ENST00000479051 TTC6Q86TZ1 520 aa24.65■■□□□ 1.54
VARS-224ENST00000479051 TICAM2Q86XR7 235 aa24.65■■□□□ 1.54
VARS-224ENST00000479051 ZKSCAN4Q969J2 545 aaPredicted RBP24.65■■□□□ 1.54
VARS-224ENST00000479051 HSPA1AP0DMV8 641 aaKnown RBP24.64■■□□□ 1.54
VARS-224ENST00000479051 HSPA1BP0DMV9 641 aaKnown RBP24.64■■□□□ 1.54
VARS-224ENST00000479051 INPP5BP32019 993 aa24.64■■□□□ 1.54
VARS-224ENST00000479051 SREBF2Q12772 1141 aa24.64■■□□□ 1.54
VARS-224ENST00000479051 CENPQQ7L2Z9 268 aaPredicted RBP24.64■■□□□ 1.54
VARS-224ENST00000479051 FOXP4Q8IVH2 680 aaPredicted RBP24.64■■□□□ 1.54
VARS-224ENST00000479051 OPTNQ96CV9 577 aa24.64■■□□□ 1.54
VARS-224ENST00000479051 PUS7LQ9H0K6 701 aaKnown RBP24.64■■□□□ 1.54
VARS-224ENST00000479051 WBP1LQ9NX94 342 aa24.64■■□□□ 1.54
VARS-224ENST00000479051 PALD1Q9ULE6 856 aa24.64■■□□□ 1.54
VARS-224ENST00000479051 CHGBP05060 677 aa24.63■■□□□ 1.53
VARS-224ENST00000479051 POLR3DP05423 398 aaPredicted RBP24.63■■□□□ 1.53
VARS-224ENST00000479051 NOL9Q5SY16 702 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms