RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 METTL5Q9NRN9 209 aaKnown RBP8.2□□□□□ -1.1
CCDC171-207ENST00000478913 CEP350Q5VT06 3117 aa8.19□□□□□ -1.1
CCDC171-207ENST00000478913 KRTAP4-8A0A0G2JLE6 195 aa8.19□□□□□ -1.1
CCDC171-207ENST00000478913 RAPGEF3O95398 923 aa8.19□□□□□ -1.1
CCDC171-207ENST00000478913 LIG3P49916 1009 aa8.19□□□□□ -1.1
CCDC171-207ENST00000478913 HNRNPUQ00839 825 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC171-207ENST00000478913 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
CCDC171-207ENST00000478913 STK35Q8TDR2 534 aa8.19□□□□□ -1.1
CCDC171-207ENST00000478913 RUSC1Q9BVN2 902 aa8.19□□□□□ -1.1
CCDC171-207ENST00000478913 ZC3H12CQ9C0D7 883 aaKnown RBP8.19□□□□□ -1.1
CCDC171-207ENST00000478913 ECEL1O95672 775 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 LMNB1P20700 586 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 FANCCQ00597 558 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 LRRC14Q15048 493 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 LLGL2Q6P1M3 1020 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
CCDC171-207ENST00000478913 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
CCDC171-207ENST00000478913 PDZD3Q86UT5 571 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 KCNB2Q92953 911 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 RNF34Q969K3 372 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 GGT7Q9UJ14 662 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 UHRF1BP1Q6BDS2 1440 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 MAP3K4Q9Y6R4 1608 aa8.18□□□□□ -1.1
CCDC171-207ENST00000478913 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-207ENST00000478913 CTSBP07858 339 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 BMP6P22004 513 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 PWP1Q13610 501 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 MAP1SQ66K74 1059 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-207ENST00000478913 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 RELL1Q8IUW5 271 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 AGGF1Q8N302 714 aaeCLIP8.17□□□□□ -1.1
CCDC171-207ENST00000478913 RNF208Q9H0X6 261 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 AKTIPQ9H8T0 292 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 CYP8B1Q9UNU6 501 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 KIAA0586Q9BVV6 1533 aa8.17□□□□□ -1.1
CCDC171-207ENST00000478913 F6X3S4 739 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 DLGAP3O95886 979 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 CHRNA4P43681 627 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
CCDC171-207ENST00000478913 ZNF252P-AS1Q0IIN9 211 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 ERMP1Q7Z2K6 904 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 TMEM130Q8N3G9 435 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 GRIN3AQ8TCU5 1115 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 RSRP1Q9BUV0 290 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 CCDC86Q9H6F5 360 aaKnown RBP8.16□□□□□ -1.1
CCDC171-207ENST00000478913 KRT82Q9NSB4 513 aa8.16□□□□□ -1.1
CCDC171-207ENST00000478913 TCF3P15923 654 aa8.15□□□□□ -1.1
CCDC171-207ENST00000478913 GBP2P32456 591 aaPredicted RBP8.15□□□□□ -1.1
CCDC171-207ENST00000478913 ADGRE1Q14246 886 aa8.15□□□□□ -1.1
CCDC171-207ENST00000478913 MBTPS1Q14703 1052 aa8.15□□□□□ -1.1
CCDC171-207ENST00000478913 EXOSC6Q5RKV6 272 aaKnown RBP8.15□□□□□ -1.1
CCDC171-207ENST00000478913 RASIP1Q5U651 963 aa8.15□□□□□ -1.1
CCDC171-207ENST00000478913 AGMOQ6ZNB7 445 aa8.15□□□□□ -1.1
CCDC171-207ENST00000478913 ACSBG1Q96GR2 724 aa8.15□□□□□ -1.1
CCDC171-207ENST00000478913 RAD18Q9NS91 495 aa8.15□□□□□ -1.1
CCDC171-207ENST00000478913 KBTBD4Q9NVX7 518 aa8.15□□□□□ -1.1
CCDC171-207ENST00000478913 TRIM37O94972 964 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 ALX3O95076 343 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 GLB1P16278 677 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 RXRBP28702 533 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
CCDC171-207ENST00000478913 NUTM2GQ5VZR2 741 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 FDX2Q6P4F2 183 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 CD163Q86VB7 1156 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 PHC3Q8NDX5 983 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 WFDC12Q8WWY7 111 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 TMEM74Q96NL1 305 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 TMPRSS13Q9BYE2 586 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 CYP4F12Q9HCS2 524 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 COPRSQ9NQ92 184 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 TLR6Q9Y2C9 796 aa8.14□□□□□ -1.11
CCDC171-207ENST00000478913 MEGF11A6BM72 1044 aa8.13□□□□□ -1.11
CCDC171-207ENST00000478913 C1QTNF9BB2RNN3 333 aa8.13□□□□□ -1.11
CCDC171-207ENST00000478913 LIG1P18858 919 aa8.13□□□□□ -1.11
CCDC171-207ENST00000478913 NOS3P29474 1203 aa8.13□□□□□ -1.11
CCDC171-207ENST00000478913 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
CCDC171-207ENST00000478913 TXNRD3Q86VQ6 643 aa8.13□□□□□ -1.11
CCDC171-207ENST00000478913 GPBAR1Q8TDU6 330 aa8.13□□□□□ -1.11
CCDC171-207ENST00000478913 CD109Q6YHK3 1445 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 MINDY4BA8MYZ0 360 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 ZNF862O60290 1169 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 AOC2O75106 756 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 TFE3P19532 575 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-207ENST00000478913 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 C9orf131Q5VYM1 1079 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 ANKRD34AQ69YU3 496 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 USP48Q86UV5 1035 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 METTL16Q86W50 562 aaKnown RBP8.12□□□□□ -1.11
CCDC171-207ENST00000478913 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 CEP41Q9BYV8 373 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 MIR1-1HGQ9H1L0 117 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 SUGCTQ9HAC7 445 aa8.12□□□□□ -1.11
CCDC171-207ENST00000478913 PRELPP51888 382 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 SEPT6Q14141 434 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 ZNF394Q53GI3 561 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 DIEXFQ68CQ4 756 aaKnown RBP8.11□□□□□ -1.11
CCDC171-207ENST00000478913 MPRIPQ6WCQ1 1025 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 NT5DC4Q86YG4 428 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms