RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
SNX21-210ENST00000478230 TSKSQ9UJT2 592 aa18.35■□□□□ 0.53
SNX21-210ENST00000478230 ZNF112Q9UJU3 913 aa18.35■□□□□ 0.53
SNX21-210ENST00000478230 AKAP11Q9UKA4 1901 aa18.35■□□□□ 0.53
SNX21-210ENST00000478230 SPDYE5A6NIY4 337 aa18.34■□□□□ 0.53
SNX21-210ENST00000478230 CYP7A1P22680 504 aa18.34■□□□□ 0.53
SNX21-210ENST00000478230 PICALMQ13492 652 aa18.34■□□□□ 0.53
SNX21-210ENST00000478230 NOM1Q5C9Z4 860 aaKnown RBP18.34■□□□□ 0.53
SNX21-210ENST00000478230 CDAN1Q8IWY9 1227 aa18.34■□□□□ 0.53
SNX21-210ENST00000478230 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
SNX21-210ENST00000478230 CFHR5Q9BXR6 569 aa18.34■□□□□ 0.53
SNX21-210ENST00000478230 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
SNX21-210ENST00000478230 PIH1D3Q9NQM4 214 aaKnown RBP18.34■□□□□ 0.53
SNX21-210ENST00000478230 TBC1D12O60347 775 aa18.33■□□□□ 0.52
SNX21-210ENST00000478230 ATP5JP18859 108 aa18.33■□□□□ 0.52
SNX21-210ENST00000478230 PPATQ06203 517 aa18.33■□□□□ 0.52
SNX21-210ENST00000478230 IFNL1Q8IU54 200 aa18.33■□□□□ 0.52
SNX21-210ENST00000478230 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
SNX21-210ENST00000478230 AK9Q5TCS8 1911 aa18.32■□□□□ 0.52
SNX21-210ENST00000478230 TESPA1A2RU30 521 aaPredicted RBP18.32■□□□□ 0.52
SNX21-210ENST00000478230 CETPP11597 493 aa18.32■□□□□ 0.52
SNX21-210ENST00000478230 MAP3K10Q02779 954 aa18.32■□□□□ 0.52
SNX21-210ENST00000478230 NOL9Q5SY16 702 aaKnown RBP18.32■□□□□ 0.52
SNX21-210ENST00000478230 OTUD5Q96G74 571 aa18.32■□□□□ 0.52
SNX21-210ENST00000478230 PICK1Q9NRD5 415 aa18.32■□□□□ 0.52
SNX21-210ENST00000478230 AATFQ9NY61 560 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNX21-210ENST00000478230 PPIL2Q13356 520 aa18.31■□□□□ 0.52
SNX21-210ENST00000478230 SNAPC2Q13487 334 aa18.31■□□□□ 0.52
SNX21-210ENST00000478230 ZFPM1Q8IX07 1006 aa18.31■□□□□ 0.52
SNX21-210ENST00000478230 ZKSCAN4Q969J2 545 aaPredicted RBP18.31■□□□□ 0.52
SNX21-210ENST00000478230 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.31■□□□□ 0.52
SNX21-210ENST00000478230 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
SNX21-210ENST00000478230 PI4KBQ9UBF8 816 aa18.31■□□□□ 0.52
SNX21-210ENST00000478230 SNCAIPQ9Y6H5 919 aa18.31■□□□□ 0.52
SNX21-210ENST00000478230 RFX7Q2KHR2 1363 aa18.3■□□□□ 0.52
SNX21-210ENST00000478230 ATRNL1Q5VV63 1379 aa18.3■□□□□ 0.52
SNX21-210ENST00000478230 CTNND1O60716 968 aaKnown RBP18.3■□□□□ 0.52
SNX21-210ENST00000478230 MAGEB6Q8N7X4 407 aa18.3■□□□□ 0.52
SNX21-210ENST00000478230 SH3RF3Q8TEJ3 882 aaPredicted RBP18.3■□□□□ 0.52
SNX21-210ENST00000478230 DNAJC2Q99543 621 aaKnown RBP18.3■□□□□ 0.52
SNX21-210ENST00000478230 OSBPL5Q9H0X9 879 aaPredicted RBP18.3■□□□□ 0.52
SNX21-210ENST00000478230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNX21-210ENST00000478230 ZCCHC17Q9NP64 241 aaKnown RBP18.3■□□□□ 0.52
SNX21-210ENST00000478230 HERC5Q9UII4 1024 aaKnown RBP18.3■□□□□ 0.52
SNX21-210ENST00000478230 COL2A1P02458 1487 aaPredicted RBP18.3■□□□□ 0.52
SNX21-210ENST00000478230 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
SNX21-210ENST00000478230 TBC1D8O95759 1140 aa18.29■□□□□ 0.52
SNX21-210ENST00000478230 INPP5BP32019 993 aa18.29■□□□□ 0.52
SNX21-210ENST00000478230 GJA5P36382 358 aa18.29■□□□□ 0.52
SNX21-210ENST00000478230 ZSCAN25Q6NSZ9 544 aa18.29■□□□□ 0.52
SNX21-210ENST00000478230 FOXP4Q8IVH2 680 aaPredicted RBP18.29■□□□□ 0.52
SNX21-210ENST00000478230 TGFBRAP1Q8WUH2 860 aa18.29■□□□□ 0.52
SNX21-210ENST00000478230 MS4A4AQ96JQ5 239 aa18.29■□□□□ 0.52
SNX21-210ENST00000478230 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
SNX21-210ENST00000478230 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
SNX21-210ENST00000478230 CCL15-CCL14A0A0B4J2E2 113 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 GPR25O00155 361 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 GOLIM4O00461 696 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 USP5P45974 858 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 CCL15Q16663 113 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 SLC9C2Q5TAH2 1124 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 SCYL3Q8IZE3 742 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 CRBNQ96SW2 442 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 HAUS7Q99871 368 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 TBC1D2Q9BYX2 928 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 BOLA2Q9H3K6 86 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 ECHDC1Q9NTX5 307 aa18.28■□□□□ 0.52
SNX21-210ENST00000478230 CXCL11O14625 94 aa18.27■□□□□ 0.52
SNX21-210ENST00000478230 FKTNO75072 461 aa18.27■□□□□ 0.52
SNX21-210ENST00000478230 ARHGEF6Q15052 776 aa18.27■□□□□ 0.52
SNX21-210ENST00000478230 PKN2Q16513 984 aaKnown RBP18.27■□□□□ 0.52
SNX21-210ENST00000478230 LRRFIP1Q32MZ4 808 aaKnown RBP18.27■□□□□ 0.52
SNX21-210ENST00000478230 SH3BP5LQ7L8J4 393 aa18.27■□□□□ 0.52
SNX21-210ENST00000478230 GCC1Q96CN9 775 aa18.27■□□□□ 0.52
SNX21-210ENST00000478230 ZFYVE28Q9HCC9 887 aa18.27■□□□□ 0.52
SNX21-210ENST00000478230 PCDHB15Q9Y5E8 787 aa18.27■□□□□ 0.52
SNX21-210ENST00000478230 MAGEB6P1A0A0J9YX57 407 aa18.26■□□□□ 0.51
SNX21-210ENST00000478230 PHF20L1A8MW92 1017 aa18.26■□□□□ 0.51
SNX21-210ENST00000478230 IGF2BP3O00425 579 aaKnown RBP eCLIP18.26■□□□□ 0.51
SNX21-210ENST00000478230 IRF6O14896 467 aa18.26■□□□□ 0.51
SNX21-210ENST00000478230 ERC2O15083 957 aa18.26■□□□□ 0.51
SNX21-210ENST00000478230 DGKZQ13574 1117 aa18.26■□□□□ 0.51
SNX21-210ENST00000478230 CRACR2BQ8N4Y2 399 aaPredicted RBP18.26■□□□□ 0.51
SNX21-210ENST00000478230 CRNKL1Q9BZJ0 848 aaKnown RBP18.26■□□□□ 0.51
SNX21-210ENST00000478230 MAST2Q6P0Q8 1798 aa18.26■□□□□ 0.51
SNX21-210ENST00000478230 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
SNX21-210ENST00000478230 PDE6AP16499 860 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 CTU1Q7Z7A3 348 aaKnown RBP18.25■□□□□ 0.51
SNX21-210ENST00000478230 ADGRA1Q86SQ6 560 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 MAPKAPK5Q8IW41 473 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 BRI3BPQ8WY22 251 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 GINM1Q9NU53 330 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 KCNH4Q9UQ05 1017 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 NDUFB9Q9Y6M9 179 aa18.25■□□□□ 0.51
SNX21-210ENST00000478230 FLT1P17948 1338 aa18.24■□□□□ 0.51
SNX21-210ENST00000478230 PTPRAP18433 802 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms