RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 WRNIP1Q96S55 665 aa17.28■□□□□ 0.36
PDE6D-204ENST00000477748 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.36
PDE6D-204ENST00000477748 MYO5AQ9Y4I1 1855 aaKnown RBP17.27■□□□□ 0.36
PDE6D-204ENST00000477748 SPDYE5A6NIY4 337 aa17.27■□□□□ 0.36
PDE6D-204ENST00000477748 BTDP43251 543 aa17.27■□□□□ 0.36
PDE6D-204ENST00000477748 SOX10P56693 466 aa17.27■□□□□ 0.36
PDE6D-204ENST00000477748 PRPF38BQ5VTL8 546 aaKnown RBP17.27■□□□□ 0.36
PDE6D-204ENST00000477748 FAM151AQ8WW52 585 aa17.27■□□□□ 0.36
PDE6D-204ENST00000477748 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.36
PDE6D-204ENST00000477748 MS4A4AQ96JQ5 239 aa17.27■□□□□ 0.36
PDE6D-204ENST00000477748 CYP2E1P05181 493 aaPredicted RBP17.26■□□□□ 0.35
PDE6D-204ENST00000477748 IFIT2P09913 472 aaKnown RBP17.26■□□□□ 0.35
PDE6D-204ENST00000477748 ZAP70P43403 619 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 NFIAQ12857 509 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 CRHR2Q13324 411 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 ZNF384Q8TF68 577 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 OTUD5Q96G74 571 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 PTPN18Q99952 460 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 ZNF341Q9BYN7 854 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 SNCAIPQ9Y6H5 919 aa17.26■□□□□ 0.35
PDE6D-204ENST00000477748 GPR75-ASB3A0A0A6YYF3 556 aa17.25■□□□□ 0.35
PDE6D-204ENST00000477748 CCL15-CCL14A0A0B4J2E2 113 aa17.25■□□□□ 0.35
PDE6D-204ENST00000477748 CCL15Q16663 113 aa17.25■□□□□ 0.35
PDE6D-204ENST00000477748 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
PDE6D-204ENST00000477748 BRI3BPQ8WY22 251 aa17.25■□□□□ 0.35
PDE6D-204ENST00000477748 ERO1AQ96HE7 468 aa17.25■□□□□ 0.35
PDE6D-204ENST00000477748 FAM198AQ9UFP1 575 aa17.25■□□□□ 0.35
PDE6D-204ENST00000477748 MAST2Q6P0Q8 1798 aa17.25■□□□□ 0.35
PDE6D-204ENST00000477748 WDHD1O75717 1129 aaPredicted RBP17.24■□□□□ 0.35
PDE6D-204ENST00000477748 RGS3P49796 1198 aa17.24■□□□□ 0.35
PDE6D-204ENST00000477748 NAA16Q6N069 864 aaPredicted RBP17.24■□□□□ 0.35
PDE6D-204ENST00000477748 NOL10Q9BSC4 688 aaKnown RBP17.24■□□□□ 0.35
PDE6D-204ENST00000477748 IDI2Q9BXS1 227 aa17.24■□□□□ 0.35
PDE6D-204ENST00000477748 ZCCHC17Q9NP64 241 aaKnown RBP17.24■□□□□ 0.35
PDE6D-204ENST00000477748 ENTPD3O75355 529 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 CETPP11597 493 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 PPIL2Q13356 520 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 SNAPC2Q13487 334 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 CRBNQ96SW2 442 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 LRRCC1Q9C099 1032 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 PIH1D3Q9NQM4 214 aaKnown RBP17.23■□□□□ 0.35
PDE6D-204ENST00000477748 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 NDUFB9Q9Y6M9 179 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 CENPFP49454 3210 aa17.23■□□□□ 0.35
PDE6D-204ENST00000477748 IGSF3O75054 1194 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 RHBDL3P58872 404 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 PPATQ06203 517 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 PICALMQ13492 652 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 TAF1CQ15572 869 aaPredicted RBP17.22■□□□□ 0.35
PDE6D-204ENST00000477748 MIGA2Q7L4E1 593 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 ZFPM1Q8IX07 1006 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
PDE6D-204ENST00000477748 ZFYVE28Q9HCC9 887 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 RFX7Q2KHR2 1363 aa17.22■□□□□ 0.35
PDE6D-204ENST00000477748 IRF6O14896 467 aa17.21■□□□□ 0.35
PDE6D-204ENST00000477748 IDH1O75874 414 aaKnown RBP17.21■□□□□ 0.35
PDE6D-204ENST00000477748 MAP4K4O95819 1239 aaPredicted RBP17.21■□□□□ 0.35
PDE6D-204ENST00000477748 SP3Q02447 781 aa17.21■□□□□ 0.35
PDE6D-204ENST00000477748 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
PDE6D-204ENST00000477748 DCTPP1Q9H773 170 aa17.21■□□□□ 0.35
PDE6D-204ENST00000477748 ZNF112Q9UJU3 913 aa17.21■□□□□ 0.35
PDE6D-204ENST00000477748 PCDHB15Q9Y5E8 787 aa17.21■□□□□ 0.35
PDE6D-204ENST00000477748 DOCK2Q92608 1830 aa17.21■□□□□ 0.35
PDE6D-204ENST00000477748 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
PDE6D-204ENST00000477748 BAG3O95817 575 aa17.2■□□□□ 0.34
PDE6D-204ENST00000477748 INPP5BP32019 993 aa17.2■□□□□ 0.34
PDE6D-204ENST00000477748 ARHGEF6Q15052 776 aa17.2■□□□□ 0.34
PDE6D-204ENST00000477748 NOL9Q5SY16 702 aaKnown RBP17.2■□□□□ 0.34
PDE6D-204ENST00000477748 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
PDE6D-204ENST00000477748 ANTXR1Q9H6X2 564 aa17.2■□□□□ 0.34
PDE6D-204ENST00000477748 DDX4Q9NQI0 724 aaKnown RBP17.2■□□□□ 0.34
PDE6D-204ENST00000477748 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDE6D-204ENST00000477748 ATRNL1Q5VV63 1379 aa17.19■□□□□ 0.34
PDE6D-204ENST00000477748 CYP7A1P22680 504 aa17.19■□□□□ 0.34
PDE6D-204ENST00000477748 MAP3K12Q12852 859 aa17.19■□□□□ 0.34
PDE6D-204ENST00000477748 TTF1Q15361 905 aaPredicted RBP17.19■□□□□ 0.34
PDE6D-204ENST00000477748 TEX11Q8IYF3 940 aa17.19■□□□□ 0.34
PDE6D-204ENST00000477748 CD99L2Q8TCZ2 262 aa17.19■□□□□ 0.34
PDE6D-204ENST00000477748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDE6D-204ENST00000477748 EFCC1Q9HA90 598 aa17.19■□□□□ 0.34
PDE6D-204ENST00000477748 DDTLA6NHG4 134 aaPredicted RBP17.18■□□□□ 0.34
PDE6D-204ENST00000477748 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
PDE6D-204ENST00000477748 PLCG2P16885 1265 aa17.18■□□□□ 0.34
PDE6D-204ENST00000477748 SH3BP5LQ7L8J4 393 aa17.18■□□□□ 0.34
PDE6D-204ENST00000477748 ADGRA1Q86SQ6 560 aa17.18■□□□□ 0.34
PDE6D-204ENST00000477748 MAGEB6Q8N7X4 407 aa17.18■□□□□ 0.34
PDE6D-204ENST00000477748 SH3RF3Q8TEJ3 882 aaPredicted RBP17.18■□□□□ 0.34
PDE6D-204ENST00000477748 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
PDE6D-204ENST00000477748 KCNH4Q9UQ05 1017 aa17.18■□□□□ 0.34
PDE6D-204ENST00000477748 PTPN22Q9Y2R2 807 aa17.18■□□□□ 0.34
PDE6D-204ENST00000477748 BRCA2P51587 3418 aa17.17■□□□□ 0.34
PDE6D-204ENST00000477748 BTBD19C9JJ37 291 aa17.17■□□□□ 0.34
PDE6D-204ENST00000477748 PPP4CP60510 307 aa17.17■□□□□ 0.34
PDE6D-204ENST00000477748 CDK5RAP2Q96SN8 1893 aa17.17■□□□□ 0.34
PDE6D-204ENST00000477748 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
PDE6D-204ENST00000477748 GOLIM4O00461 696 aa17.16■□□□□ 0.34
PDE6D-204ENST00000477748 TLR2O60603 784 aa17.16■□□□□ 0.34
PDE6D-204ENST00000477748 ATP5JP18859 108 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms