RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CLNS1AP54105 237 aaKnown RBP14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 FILIP1LQ4L180 1135 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 CDCA2Q69YH5 1023 aaPredicted RBP14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 SAAL1Q96ER3 474 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 XAGE2Q96GT9 111 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 KAZALD1Q96I82 304 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 MYO6Q9UM54 1294 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 FAM169AQ9Y6X4 670 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 ITGB4P16144 1822 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 TYRO3Q06418 890 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 MAP3K11Q16584 847 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 LUZP1Q86V48 1076 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 MAB21L3Q8N8X9 362 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 CNNM3Q8NE01 707 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 CBX8Q9HC52 389 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 SPATA31A1Q5TZJ5 1347 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 A0A087WZG4 1122 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 EPB41L2O43491 1005 aaKnown RBP14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 FSBPO95073 299 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 ETF1P62495 437 aaKnown RBP14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 MAGEC3Q8TD91 643 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 RILPL2Q969X0 211 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 TRMT1Q9NXH9 659 aaKnown RBP14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 BLOC1S6Q9UL45 172 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 ASAP1Q9ULH1 1129 aa14.43□□□□□ -0.1
RTFDC1-207ENST00000477573 BCL9O00512 1426 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 KAT6BQ8WYB5 2073 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 CCDC69A6NI79 296 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 NUTM2BA6NNL0 878 aaPredicted RBP14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 NUTM2EB1AL46 878 aaPredicted RBP14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 ATP5J2-PTCD1G3V325 749 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 H7C1W4 665 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 IFIT2P09913 472 aaKnown RBP14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 HSP90B2PQ58FF3 399 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 TSHZ3Q63HK5 1081 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 UBE3BQ7Z3V4 1068 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 NUTM2AQ8IVF1 878 aaPredicted RBP14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 LARP6Q9BRS8 491 aaKnown RBP14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 MAF1Q9H063 256 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 KIF9Q9HAQ2 790 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 PDE11AQ9HCR9 933 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 GOPCQ9HD26 462 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 CWC25Q9NXE8 425 aaPredicted RBP14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 TUBGCP6Q96RT7 1819 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 USP42Q9H9J4 1324 aaKnown RBP14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 NWD2Q9ULI1 1742 aa14.42□□□□□ -0.1
RTFDC1-207ENST00000477573 GLRX3O76003 335 aaKnown RBP14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 RTN3O95197 1032 aaPredicted RBP14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 MCM6Q14566 821 aa14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 DDB1Q16531 1140 aa14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 TTLL7Q6ZT98 887 aa14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 PARD3BQ8TEW8 1205 aa14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 PPP1R13BQ96KQ4 1090 aa14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 NUB1Q9Y5A7 615 aa14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 DDX46Q7L014 1031 aaKnown RBP14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 PA2G4Q9UQ80 394 aaKnown RBP14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 FAN1Q9Y2M0 1017 aa14.41□□□□□ -0.1
RTFDC1-207ENST00000477573 POLD1P28340 1107 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 RABL6Q3YEC7 729 aaPredicted RBP14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 HHATQ5VTY9 493 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 KIF6Q6ZMV9 814 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 RSRC2Q7L4I2 434 aaKnown RBP14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 SPATS2Q86XZ4 545 aaKnown RBP14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 CCDC50Q8IVM0 306 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 CNTROBQ8N137 903 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 RANBP17Q9H2T7 1088 aaKnown RBP14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 NUP188Q5SRE5 1749 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 C3orf20Q8ND61 904 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 PI4K2BQ8TCG2 481 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 SYTL4Q96C24 671 aaPredicted RBP14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 ZNF396Q96N95 335 aaPredicted RBP14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 PLEKHG4BQ96PX9 1271 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 PARD6BQ9BYG5 372 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 ATP6V0A4Q9HBG4 840 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 COPRSQ9NQ92 184 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 CNPY2Q9Y2B0 182 aa14.4□□□□□ -0.1
RTFDC1-207ENST00000477573 EZRP15311 586 aaKnown RBP14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 USP5P45974 858 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 FNTAP49354 379 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 DNAJC10Q8IXB1 793 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 ESYT1Q9BSJ8 1104 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 ZBTB3Q9H5J0 574 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 ECHDC1Q9NTX5 307 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 IMPACTQ9P2X3 320 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 SPATA31A5Q5VU36 1347 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 SPATA31A7Q8IWB4 1347 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 ERLIN1O75477 346 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 ECEL1O95672 775 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 TUBB4BP68371 445 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 VPS53Q5VIR6 699 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 TLDC1Q6P9B6 456 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 BARGINQ6ZT62 677 aa14.39□□□□□ -0.11
RTFDC1-207ENST00000477573 SLIT2O94813 1529 aa14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 SHOX2O60902 331 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 CDC37Q16543 378 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 EPHA10Q5JZY3 1008 aa14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 E4F1Q66K89 784 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms