RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 GOLGA1Q92805 767 aa15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 UTP14AQ9BVJ6 771 aaKnown RBP15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 ARFGAP3Q9NP61 516 aa15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 SH2B2O14492 632 aaPredicted RBP15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 TUBBP07437 444 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 GNL2Q13823 731 aaKnown RBP15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 TTF1Q15361 905 aaPredicted RBP15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 WASHC4Q2M389 1173 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 SPECC1LQ69YQ0 1117 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 KRT40Q6A162 431 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 CC2D1AQ6P1N0 951 aaPredicted RBP15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 KRT28Q7Z3Y7 464 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 ZNF579Q8NAF0 562 aaKnown RBP15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 CARD6Q9BX69 1037 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 CCDC151A5D8V7 595 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 ZNF18P17022 549 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 CABP4P57796 275 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 PPP2R3AQ06190 1150 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 GORABQ5T7V8 394 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 OTUD7BQ6GQQ9 843 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 SGMS1Q86VZ5 419 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 KRI1Q8N9T8 703 aaKnown RBP15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 CNNM3Q8NE01 707 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 HNRNPLLQ8WVV9 542 aaKnown RBP15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 PANX2Q96RD6 677 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 MTA3Q9BTC8 594 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 PLA2G12BQ9BX93 195 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 NLRP2Q9NX02 1062 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 KCNH3Q9ULD8 1083 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 WDR17Q8IZU2 1322 aa15.51■□□□□ 0.07
HLA-DMA-208ENST00000477541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 A0A0G2JLW4 131 aa15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 ERCC5P28715 1186 aaPredicted RBP15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 TRIM28Q13263 835 aaKnown RBP15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 METTL16Q86W50 562 aaKnown RBP15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 LRRN4CLQ8ND94 238 aa15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 AK7Q96M32 723 aa15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 TIAM2Q8IVF5 1701 aa15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.5■□□□□ 0.07
HLA-DMA-208ENST00000477541 CHD4Q14839 1912 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 NPHP1O15259 732 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 GPAA1O43292 621 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 TBC1D8O95759 1140 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 RCAN1P53805 252 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 SF3B2Q13435 895 aaKnown RBP15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 ALX1Q15699 326 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 CCDC57Q2TAC2 916 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 DPF2Q92785 391 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 EXOC4Q96A65 974 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 FANCLQ9NW38 375 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 CWC15Q9P013 229 aaKnown RBP15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 AKAP11Q9UKA4 1901 aa15.49■□□□□ 0.07
HLA-DMA-208ENST00000477541 SEMA3EO15041 775 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 MARCKSP29966 332 aaPredicted RBP15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 TXLNAP40222 546 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 LIFRP42702 1097 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 GNG11P61952 73 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 MDM2Q00987 491 aaPredicted RBP15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 PNOCQ13519 176 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 UBE3CQ15386 1083 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 LRRC24Q50LG9 513 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 APOA5Q6Q788 366 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 CEP112Q8N8E3 955 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 XAGE2Q96GT9 111 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 CEP131Q9UPN4 1083 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 PCDHA5Q9Y5H7 936 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 CCDC175P0C221 793 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 IARSP41252 1262 aaKnown RBP15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 SARSP49591 514 aaKnown RBP15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 FKBP4Q02790 459 aaKnown RBP eCLIP15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 SAFBQ15424 915 aaKnown RBP eCLIP15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 RILPL1Q5EBL4 403 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 TC2NQ8N9U0 490 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 KIFC2Q96AC6 838 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 CCDC51Q96ER9 411 aa15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
HLA-DMA-208ENST00000477541 KCPQ6ZWJ8 1503 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 CYP27B1O15528 508 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 ZBTB43O43298 467 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 CDK11BP21127 795 aaKnown RBP15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 HAND2P61296 217 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 MORC3Q14149 939 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 SMC1AQ14683 1233 aaKnown RBP15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 POSTNQ15063 836 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 ORAI2Q96SN7 254 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 FOXP1Q9H334 677 aaPredicted RBP15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 RAI14Q9P0K7 980 aa15.47■□□□□ 0.07
HLA-DMA-208ENST00000477541 ERICH4A6NGS2 130 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 NBPF26B4DH59 902 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 ERLIN1O75477 346 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 PTPREP23469 700 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 ADD2P35612 726 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 NTRK3Q16288 839 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 NBPF14Q5TI25 921 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 NBPF10Q6P3W6 841 aaKnown RBP15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 NOSTRINQ8IVI9 506 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms