RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 DDX41Q9UJV9 622 aaKnown RBP5.46□□□□□ -1.54
TARDBP-208ENST00000477447 PPP1R9AQ9ULJ8 1098 aa5.46□□□□□ -1.54
TARDBP-208ENST00000477447 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.46□□□□□ -1.54
TARDBP-208ENST00000477447 SUPT16HQ9Y5B9 1047 aaKnown RBP5.46□□□□□ -1.54
TARDBP-208ENST00000477447 PCDHGC5Q9Y5F6 944 aa5.46□□□□□ -1.54
TARDBP-208ENST00000477447 CSADQ9Y600 493 aa5.46□□□□□ -1.54
TARDBP-208ENST00000477447 ACTL7BQ9Y614 415 aa5.46□□□□□ -1.54
TARDBP-208ENST00000477447 TLR3O15455 904 aaKnown RBP5.45□□□□□ -1.54
TARDBP-208ENST00000477447 BPNT1O95861 308 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 RAB6AP20340 208 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 GARTP22102 1010 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 CDK8P49336 464 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 INPP5AQ14642 412 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 UVSSAQ2YD98 709 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 ZC3H12AQ5D1E8 599 aaKnown RBP5.45□□□□□ -1.54
TARDBP-208ENST00000477447 FBXL19Q6PCT2 694 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 LRFN4Q6PJG9 635 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.45□□□□□ -1.54
TARDBP-208ENST00000477447 DZIP1LQ8IYY4 767 aaKnown RBP5.45□□□□□ -1.54
TARDBP-208ENST00000477447 ZNF296Q8WUU4 475 aaPredicted RBP5.45□□□□□ -1.54
TARDBP-208ENST00000477447 PLPPR2Q96GM1 343 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 FAM46AQ96IP4 442 aaKnown RBP5.45□□□□□ -1.54
TARDBP-208ENST00000477447 SPON2Q9BUD6 331 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 PIDD1Q9HB75 910 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 CRIM1Q9NZV1 1036 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 SYNGAP1Q96PV0 1343 aa5.45□□□□□ -1.54
TARDBP-208ENST00000477447 PRAMEF27A3QJZ7 478 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 ASPAP45381 313 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 USP11P51784 963 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 GPAT2Q6NUI2 795 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 HDXQ7Z353 690 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 CCDC84Q86UT8 332 aaPredicted RBP5.44□□□□□ -1.54
TARDBP-208ENST00000477447 C12orf40Q86WS4 652 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 FBXO27Q8NI29 283 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 GATAD2BQ8WXI9 593 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 TP53INP1Q96A56 240 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 FANCD2OSQ96PS1 177 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 SSBP4Q9BWG4 385 aaPredicted RBP5.44□□□□□ -1.54
TARDBP-208ENST00000477447 TGIF2Q9GZN2 237 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 ATXN3LQ9H3M9 355 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 ACBD3Q9H3P7 528 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 FAM105AQ9NUU6 356 aa5.44□□□□□ -1.54
TARDBP-208ENST00000477447 FAM221AA4D161 298 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 CILPO75339 1184 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 HCLS1P14317 486 aaPredicted RBP5.43□□□□□ -1.54
TARDBP-208ENST00000477447 RXRBP28702 533 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 ERVK-24P63145 666 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 RPL6Q02878 288 aaKnown RBP5.43□□□□□ -1.54
TARDBP-208ENST00000477447 TTLL4Q14679 1199 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 SGO2Q562F6 1265 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 PPM1JQ5JR12 505 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 FAM196AQ6ZSG2 479 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 ARMC10Q8N2F6 343 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 MYRFLQ96LU7 910 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 SPOCK3Q9BQ16 436 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 KCNQ5Q9NR82 932 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 TPSG1Q9NRR2 321 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 UBP1Q9NZI7 540 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 HIF3AQ9Y2N7 669 aa5.43□□□□□ -1.54
TARDBP-208ENST00000477447 MSTNO14793 375 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 DHX15O43143 795 aaKnown RBP5.42□□□□□ -1.54
TARDBP-208ENST00000477447 RNGTTO60942 597 aaKnown RBP5.42□□□□□ -1.54
TARDBP-208ENST00000477447 PROCP04070 461 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 BMP3P12645 472 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 CRKP46108 304 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 APOBRQ0VD83 1088 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 PAK2Q13177 524 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 MPP2Q14168 576 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 DOC2BQ14184 412 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 CWF19L2Q2TBE0 894 aaKnown RBP5.42□□□□□ -1.54
TARDBP-208ENST00000477447 CDPF1Q6NVV7 123 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 EAF1Q96JC9 268 aaPredicted RBP5.42□□□□□ -1.54
TARDBP-208ENST00000477447 YIPF2Q9BWQ6 316 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 KCNF1Q9H3M0 494 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 DISC1Q9NRI5 854 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 INPP5FQ9Y2H2 1132 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 SNCAIPQ9Y6H5 919 aa5.42□□□□□ -1.54
TARDBP-208ENST00000477447 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.41□□□□□ -1.54
TARDBP-208ENST00000477447 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 GREM1O60565 184 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 NEFMP07197 916 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 MAP4P27816 1152 aaKnown RBP5.41□□□□□ -1.54
TARDBP-208ENST00000477447 TNNI2P48788 182 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 ETF1P62495 437 aaKnown RBP5.41□□□□□ -1.54
TARDBP-208ENST00000477447 SEZ6Q53EL9 994 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 CYFIP1Q7L576 1253 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 REC114Q7Z4M0 266 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 FAM20CQ8IXL6 584 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 RNF214Q8ND24 703 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 FBLIM1Q8WUP2 373 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 LRRC3Q9BY71 257 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 GSX1Q9H4S2 264 aaPredicted RBP5.41□□□□□ -1.54
TARDBP-208ENST00000477447 SSU72Q9NP77 194 aaKnown RBP5.41□□□□□ -1.54
TARDBP-208ENST00000477447 DAGLAQ9Y4D2 1042 aa5.41□□□□□ -1.54
TARDBP-208ENST00000477447 GFRA2O00451 464 aa5.4□□□□□ -1.54
TARDBP-208ENST00000477447 GRIN3BO60391 1043 aa5.4□□□□□ -1.54
TARDBP-208ENST00000477447 GRK4P32298 578 aa5.4□□□□□ -1.54
TARDBP-208ENST00000477447 ZBTB37Q5TC79 503 aa5.4□□□□□ -1.54
TARDBP-208ENST00000477447 BEND4Q6ZU67 534 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms