RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SLC4A8Q2Y0W8 1093 aa19.14■□□□□ 0.65
COPS3-207ENST00000477299 MOB2Q70IA6 237 aa19.14■□□□□ 0.65
COPS3-207ENST00000477299 STRBPQ96SI9 672 aaKnown RBP19.14■□□□□ 0.65
COPS3-207ENST00000477299 IL25Q9H293 177 aa19.14■□□□□ 0.65
COPS3-207ENST00000477299 TMOD2Q9NZR1 351 aa19.14■□□□□ 0.65
COPS3-207ENST00000477299 SSC5DA1L4H1 1573 aa19.14■□□□□ 0.65
COPS3-207ENST00000477299 SMIM22K7EJ46 135 aa19.13■□□□□ 0.65
COPS3-207ENST00000477299 ZFYP08048 801 aaPredicted RBP19.13■□□□□ 0.65
COPS3-207ENST00000477299 PRKG1Q13976 671 aa19.13■□□□□ 0.65
COPS3-207ENST00000477299 FKBP1CQ5VVH2 108 aa19.13■□□□□ 0.65
COPS3-207ENST00000477299 FAM151AQ8WW52 585 aa19.13■□□□□ 0.65
COPS3-207ENST00000477299 SAP30BPQ9UHR5 308 aaKnown RBP19.13■□□□□ 0.65
COPS3-207ENST00000477299 GPAA1O43292 621 aa19.12■□□□□ 0.65
COPS3-207ENST00000477299 CELF2O95319 508 aaKnown RBP19.12■□□□□ 0.65
COPS3-207ENST00000477299 HTRA3P83110 453 aa19.12■□□□□ 0.65
COPS3-207ENST00000477299 FAM83AQ86UY5 434 aa19.12■□□□□ 0.65
COPS3-207ENST00000477299 AIDAQ96BJ3 306 aa19.12■□□□□ 0.65
COPS3-207ENST00000477299 DDX60LQ5H9U9 1706 aaKnown RBP19.11■□□□□ 0.65
COPS3-207ENST00000477299 FLT1P17948 1338 aa19.11■□□□□ 0.65
COPS3-207ENST00000477299 ENTPD3O75355 529 aa19.11■□□□□ 0.65
COPS3-207ENST00000477299 PLCG2P16885 1265 aa19.11■□□□□ 0.65
COPS3-207ENST00000477299 CHMLP26374 656 aa19.11■□□□□ 0.65
COPS3-207ENST00000477299 TNNI2P48788 182 aa19.11■□□□□ 0.65
COPS3-207ENST00000477299 CWC27Q6UX04 472 aaKnown RBP19.11■□□□□ 0.65
COPS3-207ENST00000477299 ZNF589Q86UQ0 364 aaPredicted RBP19.11■□□□□ 0.65
COPS3-207ENST00000477299 OSBPL5Q9H0X9 879 aaPredicted RBP19.11■□□□□ 0.65
COPS3-207ENST00000477299 MKRN1Q9UHC7 482 aaKnown RBP19.11■□□□□ 0.65
COPS3-207ENST00000477299 PALD1Q9ULE6 856 aa19.11■□□□□ 0.65
COPS3-207ENST00000477299 SLC4A4Q9Y6R1 1079 aa19.11■□□□□ 0.65
COPS3-207ENST00000477299 GSG1L2A8MUP6 293 aa19.1■□□□□ 0.65
COPS3-207ENST00000477299 FOXP2O15409 715 aa19.1■□□□□ 0.65
COPS3-207ENST00000477299 CYP2D6P10635 497 aa19.1■□□□□ 0.65
COPS3-207ENST00000477299 USP5P45974 858 aa19.1■□□□□ 0.65
COPS3-207ENST00000477299 TNFAIP1Q13829 316 aa19.1■□□□□ 0.65
COPS3-207ENST00000477299 BMP2KLQ5H9B9 411 aa19.1■□□□□ 0.65
COPS3-207ENST00000477299 VPS53Q5VIR6 699 aa19.1■□□□□ 0.65
COPS3-207ENST00000477299 TMED8Q6PL24 325 aaPredicted RBP19.1■□□□□ 0.65
COPS3-207ENST00000477299 MIGA2Q7L4E1 593 aa19.1■□□□□ 0.65
COPS3-207ENST00000477299 CYP2D7A0A087X1C5 515 aa19.09■□□□□ 0.65
COPS3-207ENST00000477299 FAM196BA6NMK8 535 aa19.09■□□□□ 0.65
COPS3-207ENST00000477299 CRNKL1Q9BZJ0 848 aaKnown RBP19.09■□□□□ 0.65
COPS3-207ENST00000477299 DCP1AQ9NPI6 582 aaPredicted RBP19.09■□□□□ 0.65
COPS3-207ENST00000477299 HELLSQ9NRZ9 838 aa19.09■□□□□ 0.65
COPS3-207ENST00000477299 OTOFQ9HC10 1997 aa19.08■□□□□ 0.65
COPS3-207ENST00000477299 LRRFIP1Q32MZ4 808 aaKnown RBP19.08■□□□□ 0.64
COPS3-207ENST00000477299 MCMDC2Q4G0Z9 681 aa19.08■□□□□ 0.64
COPS3-207ENST00000477299 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.64
COPS3-207ENST00000477299 EPB41L4AQ9HCS5 686 aaPredicted RBP19.08■□□□□ 0.64
COPS3-207ENST00000477299 DIAPH3Q9NSV4 1193 aa19.08■□□□□ 0.64
COPS3-207ENST00000477299 PPP2R3BQ9Y5P8 575 aa19.08■□□□□ 0.64
COPS3-207ENST00000477299 USP2O75604 605 aaPredicted RBP19.07■□□□□ 0.64
COPS3-207ENST00000477299 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
COPS3-207ENST00000477299 PLCD1P51178 756 aa19.07■□□□□ 0.64
COPS3-207ENST00000477299 ATRNL1Q5VV63 1379 aa19.06■□□□□ 0.64
COPS3-207ENST00000477299 UBE2Q2LH0YL09 131 aa19.06■□□□□ 0.64
COPS3-207ENST00000477299 CSRNP1Q96S65 589 aa19.06■□□□□ 0.64
COPS3-207ENST00000477299 MCM9Q9NXL9 1143 aa19.06■□□□□ 0.64
COPS3-207ENST00000477299 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.06■□□□□ 0.64
COPS3-207ENST00000477299 APLP1P51693 650 aa19.05■□□□□ 0.64
COPS3-207ENST00000477299 IFNL3Q8IZI9 196 aa19.05■□□□□ 0.64
COPS3-207ENST00000477299 GBA2Q9HCG7 927 aaPredicted RBP19.05■□□□□ 0.64
COPS3-207ENST00000477299 PAPPA2Q9BXP8 1791 aa19.05■□□□□ 0.64
COPS3-207ENST00000477299 RPAP1Q9BWH6 1393 aaPredicted RBP19.05■□□□□ 0.64
COPS3-207ENST00000477299 CCDC171Q6TFL3 1326 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 PATL2C9JE40 543 aaKnown RBP19.04■□□□□ 0.64
COPS3-207ENST00000477299 USP17L12C9JPN9 530 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 USP17L21D6R901 530 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 APPP05067 770 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 TTLL12Q14166 644 aaPredicted RBP19.04■□□□□ 0.64
COPS3-207ENST00000477299 RRP1BQ14684 758 aaKnown RBP19.04■□□□□ 0.64
COPS3-207ENST00000477299 SUPT20HL1Q3ZLR7 823 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 CTR9Q6PD62 1173 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 TICAM2Q86XR7 235 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 CERS3Q8IU89 383 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 DNAJC18Q9H819 358 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 ANGEL1Q9UNK9 670 aaKnown RBP19.04■□□□□ 0.64
COPS3-207ENST00000477299 MYH8P13535 1937 aa19.04■□□□□ 0.64
COPS3-207ENST00000477299 TMEM88BA6NKF7 163 aa19.03■□□□□ 0.64
COPS3-207ENST00000477299 HIP1O00291 1037 aa19.03■□□□□ 0.64
COPS3-207ENST00000477299 HSPD1P10809 573 aaKnown RBP19.03■□□□□ 0.64
COPS3-207ENST00000477299 STK11IPQ8N1F8 1099 aa19.03■□□□□ 0.64
COPS3-207ENST00000477299 DYNLL2Q96FJ2 89 aa19.03■□□□□ 0.64
COPS3-207ENST00000477299 ATP8A2Q9NTI2 1148 aa19.03■□□□□ 0.64
COPS3-207ENST00000477299 LAMB1P07942 1786 aa19.03■□□□□ 0.64
COPS3-207ENST00000477299 COL2A1P02458 1487 aaPredicted RBP19.03■□□□□ 0.64
COPS3-207ENST00000477299 ATAD5Q96QE3 1844 aa19.02■□□□□ 0.64
COPS3-207ENST00000477299 POLR3DP05423 398 aaPredicted RBP19.02■□□□□ 0.64
COPS3-207ENST00000477299 PTH1RQ03431 593 aa19.02■□□□□ 0.64
COPS3-207ENST00000477299 SHROOM1Q2M3G4 852 aaPredicted RBP19.02■□□□□ 0.64
COPS3-207ENST00000477299 CLMNQ96JQ2 1002 aa19.02■□□□□ 0.64
COPS3-207ENST00000477299 SGSM2O43147 1006 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 HSPA6P17066 643 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 INPP5BP32019 993 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 NF2P35240 595 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 JAG1P78504 1218 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 MAP3K10Q02779 954 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 C12orf60Q5U649 245 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 SAPCD2Q86UD0 394 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 C2orf69Q8N8R5 385 aa19.01■□□□□ 0.63
COPS3-207ENST00000477299 SLC44A5Q8NCS7 719 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms