RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
VARS2-209ENST00000477288 DAPK3O43293 454 aa20.8■□□□□ 0.92
VARS2-209ENST00000477288 SPOPO43791 374 aa20.8■□□□□ 0.92
VARS2-209ENST00000477288 PPP2R5DQ14738 602 aa20.8■□□□□ 0.92
VARS2-209ENST00000477288 MAEAQ7L5Y9 396 aa20.8■□□□□ 0.92
VARS2-209ENST00000477288 BEGAINQ9BUH8 593 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 B4E1Z4 1266 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 FAM160A1Q05DH4 1040 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 CEP85Q6P2H3 762 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 POLKQ9UBT6 870 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 EBAG9O00559 213 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 VPS52Q8N1B4 723 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 LARGE2Q8N3Y3 721 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 SHANK2Q9UPX8 1470 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 POLR3AO14802 1390 aaPredicted RBP20.79■□□□□ 0.92
VARS2-209ENST00000477288 INTS8Q75QN2 995 aaKnown RBP20.79■□□□□ 0.92
VARS2-209ENST00000477288 NBPF11Q86T75 865 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 TSGA10Q9BZW7 698 aa20.79■□□□□ 0.92
VARS2-209ENST00000477288 CIB2O75838 187 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 GABPAQ06546 454 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 CCDC122Q5T0U0 273 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 NKIRAS1Q9NYS0 192 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.78■□□□□ 0.92
VARS2-209ENST00000477288 TNFAIP3P21580 790 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 RNASE9P60153 205 aaKnown RBP20.78■□□□□ 0.92
VARS2-209ENST00000477288 PPP2R5CQ13362 524 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 PPANQ9NQ55 473 aaKnown RBP20.78■□□□□ 0.92
VARS2-209ENST00000477288 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.78■□□□□ 0.92
VARS2-209ENST00000477288 VIMP08670 466 aaKnown RBP20.78■□□□□ 0.92
VARS2-209ENST00000477288 CCDC110Q8TBZ0 833 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 EPSTI1Q96J88 318 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 HELLSQ9NRZ9 838 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 PIK3AP1Q6ZUJ8 805 aa20.78■□□□□ 0.92
VARS2-209ENST00000477288 NOC4LQ9BVI4 516 aaKnown RBP20.78■□□□□ 0.92
VARS2-209ENST00000477288 CLUL1Q15846 466 aa20.77■□□□□ 0.92
VARS2-209ENST00000477288 FNBP4Q8N3X1 1017 aaPredicted RBP20.77■□□□□ 0.92
VARS2-209ENST00000477288 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.77■□□□□ 0.922e-6■■■■■ 26.8
VARS2-209ENST00000477288 PDE4DQ08499 809 aa20.77■□□□□ 0.92
VARS2-209ENST00000477288 NCAPH2Q6IBW4 605 aa20.77■□□□□ 0.92
VARS2-209ENST00000477288 DPP8Q6V1X1 898 aaPredicted RBP20.77■□□□□ 0.92
VARS2-209ENST00000477288 TSPYL6Q8N831 410 aa20.77■□□□□ 0.92
VARS2-209ENST00000477288 EYA1Q99502 592 aa20.77■□□□□ 0.92
VARS2-209ENST00000477288 H0YIN7 160 aa20.77■□□□□ 0.92
VARS2-209ENST00000477288 STMN2Q93045 179 aa20.77■□□□□ 0.92
VARS2-209ENST00000477288 NACA2Q9H009 215 aa20.77■□□□□ 0.92
VARS2-209ENST00000477288 PLCD1P51178 756 aa20.77■□□□□ 0.91
VARS2-209ENST00000477288 PUM3Q15397 648 aaKnown RBP20.77■□□□□ 0.91
VARS2-209ENST00000477288 NAA25Q14CX7 972 aa20.76■□□□□ 0.91
VARS2-209ENST00000477288 GPR161Q8N6U8 529 aaKnown RBP20.76■□□□□ 0.91
VARS2-209ENST00000477288 HOXC9P31274 260 aa20.76■□□□□ 0.91
VARS2-209ENST00000477288 A0A1B0GUL7 405 aa20.76■□□□□ 0.91
VARS2-209ENST00000477288 ARHGEF35A5YM69 484 aa20.76■□□□□ 0.91
VARS2-209ENST00000477288 SEPT6Q14141 434 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 CCDC26Q8TAB7 109 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 HPDP32754 393 aaPredicted RBP20.75■□□□□ 0.91
VARS2-209ENST00000477288 PARP10Q53GL7 1025 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 FMNL3Q8IVF7 1028 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 CPXCR1Q8N123 301 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 MAST3O60307 1309 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 TXKP42681 527 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 TIMM10P62072 90 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 HAUS3Q68CZ6 603 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 SEPT14Q6ZU15 432 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 CALUO43852 315 aaPredicted RBP20.75■□□□□ 0.91
VARS2-209ENST00000477288 FAM76AQ8TAV0 307 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 AATFQ9NY61 560 aaKnown RBP eCLIP20.75■□□□□ 0.91
VARS2-209ENST00000477288 EXOC7Q9UPT5 735 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 ZBED4O75132 1171 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 CEP85LQ5SZL2 805 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 SPOUT1Q5T280 376 aaKnown RBP20.75■□□□□ 0.91
VARS2-209ENST00000477288 CCDC24Q8N4L8 307 aa20.75■□□□□ 0.91
VARS2-209ENST00000477288 USH1GQ495M9 461 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 UIMC1Q96RL1 719 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 PRIM1P49642 420 aaKnown RBP20.74■□□□□ 0.91
VARS2-209ENST00000477288 TCP10Q12799 353 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 CLSTN2Q9H4D0 955 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 A0A1B0GVL5 298 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 TTC36A6NLP5 189 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 SATB1Q01826 763 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 BIRC2Q13490 618 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 PSMD6Q15008 389 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 ARFGAP2Q8N6H7 521 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 CSRNP2Q9H175 543 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 AZI2Q9H6S1 392 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 PPFIBP2Q8ND30 876 aa20.74■□□□□ 0.91
VARS2-209ENST00000477288 AKR1B15C9JRZ8 316 aaPredicted RBP20.73■□□□□ 0.91
VARS2-209ENST00000477288 SH3TC1Q8TE82 1336 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 LACTBP83111 547 aaPredicted RBP20.73■□□□□ 0.91
VARS2-209ENST00000477288 ITIH3Q06033 890 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 LIN9Q5TKA1 542 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 ELP1O95163 1332 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 RAD50Q92878 1312 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 PRDM1O75626 825 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 TBC1D31Q96DN5 1066 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 VPS16Q9H269 839 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 TACC3Q9Y6A5 838 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 PDE8AO60658 829 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 EAPPQ56P03 285 aaPredicted RBP20.73■□□□□ 0.91
VARS2-209ENST00000477288 PLBD2Q8NHP8 589 aa20.73■□□□□ 0.91
VARS2-209ENST00000477288 SOS1Q07889 1333 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms