RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 GOLGA8AA7E2F4 631 aa13.4□□□□□ -0.27
NUP188-205ENST00000477069 ZNF500O60304 480 aaPredicted RBP13.4□□□□□ -0.27
NUP188-205ENST00000477069 ADCY5O95622 1261 aa13.4□□□□□ -0.27
NUP188-205ENST00000477069 ALG1Q9BT22 464 aa13.4□□□□□ -0.27
NUP188-205ENST00000477069 MYL10Q9BUA6 226 aa13.4□□□□□ -0.27
NUP188-205ENST00000477069 MYH6P13533 1939 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 A0A1W2PQ27 194 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 A0A1W2PQ64 194 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 A0A1W2PQD8 194 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 PHKBQ93100 1093 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 NSUN4Q96CB9 384 aaKnown RBP13.39□□□□□ -0.27
NUP188-205ENST00000477069 BRIP1Q9BX63 1249 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
NUP188-205ENST00000477069 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 FGRP09769 529 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 RCAN1P53805 252 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 FAM160A1Q05DH4 1040 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 NFXL1Q6ZNB6 911 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 LRRC4BQ9NT99 713 aa13.39□□□□□ -0.27
NUP188-205ENST00000477069 AFF2P51816 1311 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
NUP188-205ENST00000477069 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
NUP188-205ENST00000477069 MSNP26038 577 aaKnown RBP13.38□□□□□ -0.27
NUP188-205ENST00000477069 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
NUP188-205ENST00000477069 SEC23AQ15436 765 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 ANO6Q4KMQ2 910 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 VPS37DQ86XT2 251 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 FMR1NBQ8N0W7 255 aaPredicted RBP13.38□□□□□ -0.27
NUP188-205ENST00000477069 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 IFNAR1P17181 557 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 HIBADHP31937 336 aaKnown RBP13.38□□□□□ -0.27
NUP188-205ENST00000477069 KRT40Q6A162 431 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 KCNG4Q8TDN1 519 aa13.38□□□□□ -0.27
NUP188-205ENST00000477069 CTAGE5O15320 804 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 IARSP41252 1262 aaKnown RBP13.37□□□□□ -0.27
NUP188-205ENST00000477069 ME1P48163 572 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 NFIXQ14938 502 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 WTAPQ15007 396 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
NUP188-205ENST00000477069 CBX8Q9HC52 389 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 LRRC37AA6NMS7 1700 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 LTBP1Q14766 1721 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 UBE2Q2LH0YL09 131 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 U2AF2P26368 475 aaKnown RBP eCLIP13.37□□□□□ -0.273e-7■■■■□ 19.4
NUP188-205ENST00000477069 MECOMQ03112 1051 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 RRP12Q5JTH9 1297 aaKnown RBP13.37□□□□□ -0.27
NUP188-205ENST00000477069 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 FAM196AQ6ZSG2 479 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 ZKSCAN3Q9BRR0 538 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
NUP188-205ENST00000477069 TFCP2L1Q9NZI6 479 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 CDK5RAP2Q96SN8 1893 aa13.37□□□□□ -0.27
NUP188-205ENST00000477069 RFC4P35249 363 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 TMED8Q6PL24 325 aaPredicted RBP13.36□□□□□ -0.27
NUP188-205ENST00000477069 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 MRPS27Q92552 414 aaKnown RBP13.36□□□□□ -0.27
NUP188-205ENST00000477069 ADRA2BP18089 450 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
NUP188-205ENST00000477069 AXDND1Q5T1B0 1012 aaPredicted RBP13.36□□□□□ -0.27
NUP188-205ENST00000477069 SLC51AQ86UW1 340 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 TMTC2Q8N394 836 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 TDRD7Q8NHU6 1098 aaKnown RBP13.36□□□□□ -0.27
NUP188-205ENST00000477069 EP400Q96L91 3159 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 SPTLC2O15270 562 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 GRAPQ13588 217 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 SASS6Q6UVJ0 657 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 SEPT12Q8IYM1 358 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 GRAPLQ8TC17 118 aaPredicted RBP13.36□□□□□ -0.27
NUP188-205ENST00000477069 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
NUP188-205ENST00000477069 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP188-205ENST00000477069 NAV1Q8NEY1 1877 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 MINDY4BA8MYZ0 360 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 PCP11498 1178 aaKnown RBP13.35□□□□□ -0.27
NUP188-205ENST00000477069 SSRP1Q08945 709 aaKnown RBP13.35□□□□□ -0.27
NUP188-205ENST00000477069 STK38Q15208 465 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 PTPAQ15257 358 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 RTN1Q16799 776 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 TNKSO95271 1327 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
NUP188-205ENST00000477069 CAVIN2O95810 425 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 GUCY1A2P33402 732 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 ZNF654Q8IZM8 581 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 ESR2Q92731 530 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 SLC26A6Q9BXS9 759 aa13.35□□□□□ -0.27
NUP188-205ENST00000477069 TRPC5Q9UL62 973 aaPredicted RBP13.35□□□□□ -0.27
NUP188-205ENST00000477069 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
NUP188-205ENST00000477069 CYP2D7A0A087X1C5 515 aa13.34□□□□□ -0.27
NUP188-205ENST00000477069 PRDX5P30044 214 aa13.34□□□□□ -0.27
NUP188-205ENST00000477069 NDUFA8P51970 172 aa13.34□□□□□ -0.27
NUP188-205ENST00000477069 SLC39A14Q15043 492 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms