RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 FOSL2P15408 326 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 GNAI1P63096 354 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 UBE4AQ14139 1066 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 GCKRQ14397 625 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 FAM110CQ1W6H9 321 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 TAF7LQ5H9L4 462 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 GADL1Q6ZQY3 521 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 MIGA2Q7L4E1 593 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 PRRT2Q7Z6L0 340 aaPredicted RBP9.35□□□□□ -0.91
PRPF3-205ENST00000476970 VPS37DQ86XT2 251 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 RUNDC1Q96C34 613 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 ZDHHC15Q96MV8 337 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 PRKAG2Q9UGJ0 569 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 ZNF112Q9UJU3 913 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 CHMP3Q9Y3E7 222 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 PIEZO1Q92508 2521 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 CDH23Q9H251 3354 aa9.35□□□□□ -0.91
PRPF3-205ENST00000476970 PHIPQ8WWQ0 1821 aa9.34□□□□□ -0.91
PRPF3-205ENST00000476970 ELL2O00472 640 aaPredicted RBP9.34□□□□□ -0.91
PRPF3-205ENST00000476970 PLIN1O60240 522 aa9.34□□□□□ -0.91
PRPF3-205ENST00000476970 FRAT2O75474 233 aaPredicted RBP9.34□□□□□ -0.91
PRPF3-205ENST00000476970 CCDC146Q8IYE0 955 aa9.34□□□□□ -0.91
PRPF3-205ENST00000476970 CCER1Q8TC90 406 aaPredicted RBP9.34□□□□□ -0.91
PRPF3-205ENST00000476970 FAM151AQ8WW52 585 aa9.34□□□□□ -0.91
PRPF3-205ENST00000476970 MRIQ9BWK5 157 aa9.34□□□□□ -0.91
PRPF3-205ENST00000476970 PICK1Q9NRD5 415 aa9.34□□□□□ -0.91
PRPF3-205ENST00000476970 CNNM1Q9NRU3 951 aa9.34□□□□□ -0.91
PRPF3-205ENST00000476970 BDP1A6H8Y1 2624 aa9.34□□□□□ -0.91
PRPF3-205ENST00000476970 LOC285556D6RIA3 1793 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 ZNF853P0CG23 659 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 GYG1P46976 350 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 CASP7P55210 303 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 CHAF1AQ13111 956 aaPredicted RBP9.33□□□□□ -0.92
PRPF3-205ENST00000476970 CCDC57Q2TAC2 916 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 HHIPL2Q6UWX4 724 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 LDHAL6AQ6ZMR3 332 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 SCYL3Q8IZE3 742 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 ANKRD13CQ8N6S4 541 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 MYLIPQ8WY64 445 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 SEMA6BQ9H3T3 888 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 SUGT1Q9Y2Z0 365 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 DNAH12Q6ZR08 3092 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 PLXNB2O15031 1838 aa9.33□□□□□ -0.92
PRPF3-205ENST00000476970 COL6A1P12109 1028 aa9.32□□□□□ -0.92
PRPF3-205ENST00000476970 PRKAR2AP13861 404 aaKnown RBP9.32□□□□□ -0.92
PRPF3-205ENST00000476970 GCLCP48506 637 aaPredicted RBP9.32□□□□□ -0.92
PRPF3-205ENST00000476970 WDR43Q15061 677 aaKnown RBP eCLIP9.32□□□□□ -0.92
PRPF3-205ENST00000476970 LRRC26Q2I0M4 334 aa9.32□□□□□ -0.92
PRPF3-205ENST00000476970 APOBEC3HQ6NTF7 200 aaKnown RBP9.32□□□□□ -0.92
PRPF3-205ENST00000476970 TRMT44Q8IYL2 757 aaKnown RBP9.32□□□□□ -0.92
PRPF3-205ENST00000476970 FAM84BQ96KN1 310 aaPredicted RBP9.32□□□□□ -0.92
PRPF3-205ENST00000476970 AGTPBP1Q9UPW5 1226 aa9.32□□□□□ -0.92
PRPF3-205ENST00000476970 ZHX2Q9Y6X8 837 aa9.32□□□□□ -0.92
PRPF3-205ENST00000476970 MYO9BQ13459 2157 aa9.31□□□□□ -0.92
PRPF3-205ENST00000476970 PTPRAP18433 802 aa9.31□□□□□ -0.92
PRPF3-205ENST00000476970 SMAD3P84022 425 aaKnown RBP9.31□□□□□ -0.92
PRPF3-205ENST00000476970 PABPC4Q13310 644 aaKnown RBP eCLIP9.31□□□□□ -0.92
PRPF3-205ENST00000476970 CAVIN4Q5BKX8 364 aa9.31□□□□□ -0.92
PRPF3-205ENST00000476970 SPDYE1Q8NFV5 336 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-205ENST00000476970 LINS1Q8NG48 757 aa9.31□□□□□ -0.92
PRPF3-205ENST00000476970 RAPGEFL1Q9UHV5 662 aa9.31□□□□□ -0.92
PRPF3-205ENST00000476970 TCP10Q12799 353 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 TRIM32Q13049 653 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 GRIK5Q16478 980 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 MAP3K21Q5TCX8 1036 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 C8orf58Q8NAV2 365 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 SOCS4Q8WXH5 440 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 TRIB2Q92519 343 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 SSUH2Q9Y2M2 353 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 AFG3L2Q9Y4W6 797 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 LRRFIP2Q9Y608 721 aaKnown RBP9.3□□□□□ -0.92
PRPF3-205ENST00000476970 ATAD5Q96QE3 1844 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 MROH5Q6ZUA9 1318 aa9.3□□□□□ -0.92
PRPF3-205ENST00000476970 TRIM75PA6NK02 468 aa9.29□□□□□ -0.92
PRPF3-205ENST00000476970 XRCC5P13010 732 aaKnown RBP9.29□□□□□ -0.92
PRPF3-205ENST00000476970 ZKSCAN1P17029 563 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-205ENST00000476970 MAP3K12Q12852 859 aa9.29□□□□□ -0.92
PRPF3-205ENST00000476970 PDE3AQ14432 1141 aa9.29□□□□□ -0.92
PRPF3-205ENST00000476970 RALBP1Q15311 655 aa9.29□□□□□ -0.92
PRPF3-205ENST00000476970 LMBR1LQ6UX01 489 aa9.29□□□□□ -0.92
PRPF3-205ENST00000476970 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-205ENST00000476970 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
PRPF3-205ENST00000476970 ZNF594Q96JF6 807 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-205ENST00000476970 NUDT12Q9BQG2 462 aa9.29□□□□□ -0.92
PRPF3-205ENST00000476970 IQSEC3Q9UPP2 1182 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-205ENST00000476970 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
PRPF3-205ENST00000476970 FOXO4P98177 505 aa9.28□□□□□ -0.92
PRPF3-205ENST00000476970 FLIIQ13045 1269 aa9.28□□□□□ -0.92
PRPF3-205ENST00000476970 FKBP5Q13451 457 aaPredicted RBP9.28□□□□□ -0.92
PRPF3-205ENST00000476970 FBXO33Q7Z6M2 555 aa9.28□□□□□ -0.92
PRPF3-205ENST00000476970 ATXN2LQ8WWM7 1075 aaKnown RBP9.28□□□□□ -0.92
PRPF3-205ENST00000476970 C1QTNF1Q9BXJ1 281 aa9.28□□□□□ -0.92
PRPF3-205ENST00000476970 TTYH1Q9H313 450 aaPredicted RBP9.28□□□□□ -0.92
PRPF3-205ENST00000476970 GJD2Q9UKL4 321 aa9.28□□□□□ -0.92
PRPF3-205ENST00000476970 HCN4Q9Y3Q4 1203 aa9.28□□□□□ -0.92
PRPF3-205ENST00000476970 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
PRPF3-205ENST00000476970 RLFQ13129 1914 aa9.28□□□□□ -0.92
PRPF3-205ENST00000476970 MYH2Q9UKX2 1941 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms