RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 OTUD5Q96G74 571 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 YTHDC1Q96MU7 727 aaKnown RBP12.45□□□□□ -0.42
CCM2-208ENST00000476594 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 FAM198AQ9UFP1 575 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 MAST2Q6P0Q8 1798 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 APBB1O00213 710 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 CETPP11597 493 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 ZAP70P43403 619 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 PPATQ06203 517 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 PPIL2Q13356 520 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 DGKZQ13574 1117 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 MIGA2Q7L4E1 593 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
CCM2-208ENST00000476594 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
CCM2-208ENST00000476594 OTOFQ9HC10 1997 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 CCL15-CCL14A0A0B4J2E2 113 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 GPR25O00155 361 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 IDH1O75874 414 aaKnown RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 ARHGEF6Q15052 776 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 CCL15Q16663 113 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 NOL9Q5SY16 702 aaKnown RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 CTU1Q7Z7A3 348 aaKnown RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 LRRCC1Q9C099 1032 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 DHX36Q9H2U1 1008 aaKnown RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 ZCCHC17Q9NP64 241 aaKnown RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 PICK1Q9NRD5 415 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 TLR7Q9NYK1 1049 aaKnown RBP12.43□□□□□ -0.42
CCM2-208ENST00000476594 RFX7Q2KHR2 1363 aa12.43□□□□□ -0.42
CCM2-208ENST00000476594 DOCK2Q92608 1830 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 CASP8AP2Q9UKL3 1982 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
CCM2-208ENST00000476594 FKTNO75072 461 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 RRP1P56182 461 aaKnown RBP12.42□□□□□ -0.42
CCM2-208ENST00000476594 RHBDL3P58872 404 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 ZKSCAN4Q969J2 545 aaPredicted RBP12.42□□□□□ -0.42
CCM2-208ENST00000476594 ABHD8Q96I13 439 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 GPATCH3Q96I76 525 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 ZFYVE28Q9HCC9 887 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCM2-208ENST00000476594 ZBTB47Q9UFB7 747 aaPredicted RBP12.42□□□□□ -0.42
CCM2-208ENST00000476594 ZNF112Q9UJU3 913 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 SNCAIPQ9Y6H5 919 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 LAMB1P07942 1786 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 ATRNL1Q5VV63 1379 aa12.42□□□□□ -0.42
CCM2-208ENST00000476594 TBC1D12O60347 775 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 HLA-DOAP06340 250 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 CYP7A1P22680 504 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 PPP4CP60510 307 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 TAF1CQ15572 869 aaPredicted RBP12.41□□□□□ -0.42
CCM2-208ENST00000476594 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 SCYL3Q8IZE3 742 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 ZNF296Q8WUU4 475 aaPredicted RBP12.41□□□□□ -0.42
CCM2-208ENST00000476594 TBC1D2Q9BYX2 928 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 MCOLN1Q9GZU1 580 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 OSBPL5Q9H0X9 879 aaPredicted RBP12.41□□□□□ -0.42
CCM2-208ENST00000476594 BCL11AQ9H165 835 aa12.41□□□□□ -0.42
CCM2-208ENST00000476594 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCM2-208ENST00000476594 HERC5Q9UII4 1024 aaKnown RBP12.41□□□□□ -0.42
CCM2-208ENST00000476594 IGF2BP3O00425 579 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCM2-208ENST00000476594 CTNND1O60716 968 aaKnown RBP12.4□□□□□ -0.42
CCM2-208ENST00000476594 INPP5BP32019 993 aa12.4□□□□□ -0.42
CCM2-208ENST00000476594 GJA5P36382 358 aa12.4□□□□□ -0.42
CCM2-208ENST00000476594 AAMPQ13685 434 aa12.4□□□□□ -0.42
CCM2-208ENST00000476594 ERO1AQ96HE7 468 aa12.4□□□□□ -0.42
CCM2-208ENST00000476594 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
CCM2-208ENST00000476594 DNAJC2Q99543 621 aaKnown RBP12.4□□□□□ -0.42
CCM2-208ENST00000476594 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCM2-208ENST00000476594 DDX4Q9NQI0 724 aaKnown RBP12.4□□□□□ -0.42
CCM2-208ENST00000476594 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
CCM2-208ENST00000476594 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
CCM2-208ENST00000476594 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
CCM2-208ENST00000476594 DDTLA6NHG4 134 aaPredicted RBP12.39□□□□□ -0.43
CCM2-208ENST00000476594 IRF6O14896 467 aa12.39□□□□□ -0.43
CCM2-208ENST00000476594 USP5P45974 858 aa12.39□□□□□ -0.43
CCM2-208ENST00000476594 MAP3K10Q02779 954 aa12.39□□□□□ -0.43
CCM2-208ENST00000476594 CRACR2BQ8N4Y2 399 aaPredicted RBP12.39□□□□□ -0.43
CCM2-208ENST00000476594 MAGEB6Q8N7X4 407 aa12.39□□□□□ -0.43
CCM2-208ENST00000476594 SH3RF3Q8TEJ3 882 aaPredicted RBP12.39□□□□□ -0.43
CCM2-208ENST00000476594 ZNF384Q8TF68 577 aa12.39□□□□□ -0.43
CCM2-208ENST00000476594 BRI3BPQ8WY22 251 aa12.39□□□□□ -0.43
CCM2-208ENST00000476594 CXCL11O14625 94 aa12.38□□□□□ -0.43
CCM2-208ENST00000476594 CRHR2Q13324 411 aa12.38□□□□□ -0.43
CCM2-208ENST00000476594 KIF22Q14807 665 aa12.38□□□□□ -0.43
CCM2-208ENST00000476594 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
CCM2-208ENST00000476594 FASTKD5Q7L8L6 764 aaKnown RBP12.38□□□□□ -0.43
CCM2-208ENST00000476594 ZFPM1Q8IX07 1006 aa12.38□□□□□ -0.43
CCM2-208ENST00000476594 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
CCM2-208ENST00000476594 PAG1Q9NWQ8 432 aa12.38□□□□□ -0.43
CCM2-208ENST00000476594 KCNH4Q9UQ05 1017 aa12.38□□□□□ -0.43
CCM2-208ENST00000476594 FLT1P17948 1338 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 CCDC85CA6NKD9 419 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms