RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 CCND3P30281 292 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 RBM5P52756 815 aaKnown RBP eCLIP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 FAM110CQ1W6H9 321 aa8.3□□□□□ -1.08
CLDN4-205ENST00000476494 NOL9Q5SY16 702 aaKnown RBP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 SH3RF1Q7Z6J0 888 aa8.3□□□□□ -1.08
CLDN4-205ENST00000476494 ANKRD13CQ8N6S4 541 aa8.3□□□□□ -1.08
CLDN4-205ENST00000476494 TIFAQ96CG3 184 aa8.3□□□□□ -1.08
CLDN4-205ENST00000476494 YTHDC1Q96MU7 727 aaKnown RBP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 GAS2L1Q99501 681 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 KCNH6Q9H252 994 aa8.3□□□□□ -1.08
CLDN4-205ENST00000476494 PNNQ9H307 717 aaKnown RBP8.3□□□□□ -1.08
CLDN4-205ENST00000476494 GREM2Q9H772 168 aa8.3□□□□□ -1.08
CLDN4-205ENST00000476494 PHIPQ8WWQ0 1821 aa8.3□□□□□ -1.08
CLDN4-205ENST00000476494 BRWD1Q9NSI6 2320 aa8.3□□□□□ -1.08
CLDN4-205ENST00000476494 ERC2O15083 957 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 XRCC5P13010 732 aaKnown RBP8.29□□□□□ -1.08
CLDN4-205ENST00000476494 HSP90B1P14625 803 aaKnown RBP8.29□□□□□ -1.08
CLDN4-205ENST00000476494 TNNI2P48788 182 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 ATN1P54259 1190 aaPredicted RBP8.29□□□□□ -1.08
CLDN4-205ENST00000476494 CACNB3P54284 484 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 SNX17Q15036 470 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 MIGA2Q7L4E1 593 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 FAM83AQ86UY5 434 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 USP6NLQ92738 828 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
CLDN4-205ENST00000476494 PDLIM7Q9NR12 457 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 CHPF2Q9P2E5 772 aa8.29□□□□□ -1.08
CLDN4-205ENST00000476494 TRANK1O15050 2925 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 RPAP1Q9BWH6 1393 aaPredicted RBP8.28□□□□□ -1.08
CLDN4-205ENST00000476494 ST18O60284 1047 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 PBX2P40425 430 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 CTSWP56202 376 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 HNRNPUQ00839 825 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLDN4-205ENST00000476494 GRIK5Q16478 980 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 KRT24Q2M2I5 525 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 NCBP3Q53F19 620 aaKnown RBP8.28□□□□□ -1.08
CLDN4-205ENST00000476494 FKBP1CQ5VVH2 108 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 FASTKD5Q7L8L6 764 aaKnown RBP8.28□□□□□ -1.08
CLDN4-205ENST00000476494 CCDC191Q8NCU4 936 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 ZNF341Q9BYN7 854 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 PRKAG2Q9UGJ0 569 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 ADAMTS8Q9UP79 889 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 JAG2Q9Y219 1238 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 AFG3L2Q9Y4W6 797 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 LRRC37A2A6NM11 1700 aa8.28□□□□□ -1.08
CLDN4-205ENST00000476494 A0A1B0GUL6 1792 aa8.27□□□□□ -1.08
CLDN4-205ENST00000476494 CRKP46108 304 aa8.27□□□□□ -1.09
CLDN4-205ENST00000476494 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
CLDN4-205ENST00000476494 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
CLDN4-205ENST00000476494 PLEKHF1Q96S99 279 aa8.27□□□□□ -1.09
CLDN4-205ENST00000476494 PBX4Q9BYU1 374 aa8.27□□□□□ -1.09
CLDN4-205ENST00000476494 ANKRD2Q9GZV1 360 aa8.27□□□□□ -1.09
CLDN4-205ENST00000476494 TSPYL4Q9UJ04 414 aa8.27□□□□□ -1.09
CLDN4-205ENST00000476494 TTF2Q9UNY4 1162 aaKnown RBP8.27□□□□□ -1.09
CLDN4-205ENST00000476494 BAHCC1Q9P281 2608 aa8.27□□□□□ -1.09
CLDN4-205ENST00000476494 PHF20L1A8MW92 1017 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 GRXCR1A8MXD5 290 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 CYP2B6P20813 491 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 CHRNDQ07001 517 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 AAK1Q2M2I8 961 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 C1orf53Q5VUE5 145 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 DCAF15Q66K64 600 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 APOBEC3HQ6NTF7 200 aaKnown RBP8.26□□□□□ -1.09
CLDN4-205ENST00000476494 BABAM1Q9NWV8 329 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 KMT2BQ9UMN6 2715 aaPredicted RBP8.26□□□□□ -1.09
CLDN4-205ENST00000476494 ZBED9Q6R2W3 1325 aa8.26□□□□□ -1.09
CLDN4-205ENST00000476494 TRIOO75962 3097 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 DNM1LO00429 736 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 IGHA2P01877 340 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 PTPRAP18433 802 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 IGFBP4P22692 258 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 CCL14Q16627 93 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 MFSD14BQ5SR56 506 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 TREML2Q5T2D2 321 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 TDRD7Q8NHU6 1098 aaKnown RBP8.25□□□□□ -1.09
CLDN4-205ENST00000476494 SMCR8Q8TEV9 937 aaPredicted RBP8.25□□□□□ -1.09
CLDN4-205ENST00000476494 ANKS1AQ92625 1134 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 RUNDC1Q96C34 613 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 HOOK2Q96ED9 719 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 AGTPBP1Q9UPW5 1226 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 ATP11BQ9Y2G3 1177 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 ZHX2Q9Y6X8 837 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 GBF1Q92538 1859 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 PKD1L2Q7Z442 2459 aa8.25□□□□□ -1.09
CLDN4-205ENST00000476494 ATRNL1Q5VV63 1379 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 ZFHX4Q86UP3 3567 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 CACNA1HO95180 2353 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 TAF5LO75529 589 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 KRT37O76014 449 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 NEFMP07197 916 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 POU3F3P20264 500 aaPredicted RBP8.24□□□□□ -1.09
CLDN4-205ENST00000476494 HDLBPQ00341 1268 aaKnown RBP8.24□□□□□ -1.09
CLDN4-205ENST00000476494 NFE2L2Q16236 605 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 TRIM60Q495X7 471 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 GADL1Q6ZQY3 521 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 C16orf59Q7L2K0 433 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 LPAR1Q92633 364 aa8.24□□□□□ -1.09
CLDN4-205ENST00000476494 MRIQ9BWK5 157 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms