RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 NARFQ9UHQ1 456 aa18.57■□□□□ 0.56
VARS2-207ENST00000476162 CCDC69A6NI79 296 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 CTAGE5O15320 804 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 RPS6KA4O75676 772 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 ZNF165P49910 485 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 SF3A1Q15459 793 aaKnown RBP18.56■□□□□ 0.56
VARS2-207ENST00000476162 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 SYNE3Q6ZMZ3 975 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 ZNF710Q8N1W2 664 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 SDR42E1Q8WUS8 393 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 FAM84BQ96KN1 310 aaPredicted RBP18.56■□□□□ 0.56
VARS2-207ENST00000476162 SETDB2Q96T68 719 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 ZKSCAN3Q9BRR0 538 aa18.56■□□□□ 0.56
VARS2-207ENST00000476162 TTC12Q9H892 705 aaPredicted RBP18.56■□□□□ 0.56
VARS2-207ENST00000476162 COL1A1P02452 1464 aaPredicted RBP18.56■□□□□ 0.56
VARS2-207ENST00000476162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.55■□□□□ 0.56
VARS2-207ENST00000476162 GNPATO15228 680 aa18.55■□□□□ 0.56
VARS2-207ENST00000476162 YEATS4O95619 227 aa18.55■□□□□ 0.56
VARS2-207ENST00000476162 RC3H1Q5TC82 1133 aaKnown RBP18.55■□□□□ 0.56
VARS2-207ENST00000476162 KCNG4Q8TDN1 519 aa18.55■□□□□ 0.56
VARS2-207ENST00000476162 RGL2O15211 777 aa18.55■□□□□ 0.56
VARS2-207ENST00000476162 SPTLC2O15270 562 aa18.55■□□□□ 0.56
VARS2-207ENST00000476162 RANBP6O60518 1105 aaKnown RBP18.55■□□□□ 0.56
VARS2-207ENST00000476162 IARSP41252 1262 aaKnown RBP18.55■□□□□ 0.56
VARS2-207ENST00000476162 KRT40Q6A162 431 aa18.55■□□□□ 0.56
VARS2-207ENST00000476162 FNBP4Q8N3X1 1017 aaPredicted RBP18.55■□□□□ 0.56
VARS2-207ENST00000476162 CCDC24Q8N4L8 307 aa18.55■□□□□ 0.56
VARS2-207ENST00000476162 MRPS27Q92552 414 aaKnown RBP18.55■□□□□ 0.56
VARS2-207ENST00000476162 MAGEB6P1A0A0J9YX57 407 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 A0A1B0GVL5 298 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 PPARAQ07869 468 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 NBPF5PQ86XG9 351 aaPredicted RBP18.54■□□□□ 0.56
VARS2-207ENST00000476162 FMR1NBQ8N0W7 255 aaPredicted RBP18.54■□□□□ 0.56
VARS2-207ENST00000476162 RGS22Q8NE09 1264 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 NYXQ9GZU5 481 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 A0A1W2PQ27 194 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 A0A1W2PQ64 194 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 A0A1W2PQD8 194 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 ZPR1O75312 459 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 RPS8P62241 208 aaKnown RBP18.54■□□□□ 0.56
VARS2-207ENST00000476162 ANO1Q5XXA6 986 aa18.54■□□□□ 0.56
VARS2-207ENST00000476162 IPO4Q8TEX9 1081 aaKnown RBP18.54■□□□□ 0.56
VARS2-207ENST00000476162 MINDY4BA8MYZ0 360 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 UBE2Q2LH0YL09 131 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 KLRK1P26718 216 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 NDUFA8P51970 172 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 KIAA2012Q0VF49 1180 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 AMIGO3Q86WK7 504 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 SPC24Q8NBT2 197 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 TIAM2Q8IVF5 1701 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 WTAPQ15007 396 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 SART3Q15020 963 aaKnown RBP18.53■□□□□ 0.56
VARS2-207ENST00000476162 TDRD7Q8NHU6 1098 aaKnown RBP18.53■□□□□ 0.56
VARS2-207ENST00000476162 RIOK1Q9BRS2 568 aaKnown RBP18.53■□□□□ 0.56
VARS2-207ENST00000476162 SLC26A6Q9BXS9 759 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 RNF41Q9H4P4 317 aaPredicted RBP18.53■□□□□ 0.56
VARS2-207ENST00000476162 CCNL1Q9UK58 526 aaPredicted RBP18.53■□□□□ 0.56
VARS2-207ENST00000476162 USP21Q9UK80 565 aa18.53■□□□□ 0.56
VARS2-207ENST00000476162 CHD4Q14839 1912 aa18.52■□□□□ 0.56
VARS2-207ENST00000476162 SMIM22K7EJ46 135 aa18.52■□□□□ 0.56
VARS2-207ENST00000476162 CAVIN2O95810 425 aa18.52■□□□□ 0.56
VARS2-207ENST00000476162 GTF2F1P35269 517 aaKnown RBP eCLIP18.52■□□□□ 0.56
VARS2-207ENST00000476162 DYNLL1P63167 89 aaKnown RBP18.51■□□□□ 0.55
VARS2-207ENST00000476162 SSRP1Q08945 709 aaKnown RBP18.51■□□□□ 0.55
VARS2-207ENST00000476162 C11orf57Q6ZUT1 292 aaPredicted RBP18.51■□□□□ 0.55
VARS2-207ENST00000476162 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 ZNF384Q8TF68 577 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 ERCC4Q92889 916 aaPredicted RBP18.51■□□□□ 0.55
VARS2-207ENST00000476162 RTCBQ9Y3I0 505 aaKnown RBP18.51■□□□□ 0.55
VARS2-207ENST00000476162 SCN7AQ01118 1682 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 A0A087WWV3 80 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 ERICH2A1L162 156 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 GNL2Q13823 731 aaKnown RBP18.51■□□□□ 0.55
VARS2-207ENST00000476162 TRIM29Q14134 588 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 STX1AQ16623 288 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 TPTE2Q6XPS3 522 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 ARHGEF1Q92888 912 aaKnown RBP18.51■□□□□ 0.55
VARS2-207ENST00000476162 A0A1B0GUL6 1792 aa18.51■□□□□ 0.55
VARS2-207ENST00000476162 FMNL1O95466 1100 aaPredicted RBP18.5■□□□□ 0.55
VARS2-207ENST00000476162 IFNAR1P17181 557 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 TAF3Q5VWG9 929 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 PRIMPOLQ96LW4 560 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 SDF4Q9BRK5 362 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 STK36Q9NRP7 1315 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 SLC39A14Q15043 492 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 IQCB1Q15051 598 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 RTN1Q16799 776 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 AXDND1Q5T1B0 1012 aaPredicted RBP18.5■□□□□ 0.55
VARS2-207ENST00000476162 TFCP2L1Q9NZI6 479 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 ANAPC4Q9UJX5 808 aa18.5■□□□□ 0.55
VARS2-207ENST00000476162 U2AF2P26368 475 aaKnown RBP eCLIP18.49■□□□□ 0.55
VARS2-207ENST00000476162 MARCKSP29966 332 aaPredicted RBP18.49■□□□□ 0.55
VARS2-207ENST00000476162 GUCY1A2P33402 732 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 TMTC2Q8N394 836 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 MTA3Q9BTC8 594 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 TRIM5Q9C035 493 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 CASZ1Q86V15 1759 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms