RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 CETPP11597 493 aa16.84■□□□□ 0.29
TMCO1-205ENST00000476143 CCL15Q16663 113 aa16.84■□□□□ 0.29
TMCO1-205ENST00000476143 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
TMCO1-205ENST00000476143 FAM198AQ9UFP1 575 aa16.84■□□□□ 0.29
TMCO1-205ENST00000476143 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
TMCO1-205ENST00000476143 IFIT2P09913 472 aaKnown RBP16.83■□□□□ 0.28
TMCO1-205ENST00000476143 PPATQ06203 517 aa16.83■□□□□ 0.28
TMCO1-205ENST00000476143 PPIL2Q13356 520 aa16.83■□□□□ 0.28
TMCO1-205ENST00000476143 SNAPC2Q13487 334 aa16.83■□□□□ 0.28
TMCO1-205ENST00000476143 PKN2Q16513 984 aaKnown RBP16.83■□□□□ 0.28
TMCO1-205ENST00000476143 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
TMCO1-205ENST00000476143 RHPN1Q8TCX5 695 aa16.83■□□□□ 0.28
TMCO1-205ENST00000476143 ZKSCAN4Q969J2 545 aaPredicted RBP16.83■□□□□ 0.28
TMCO1-205ENST00000476143 EAF2Q96CJ1 260 aaPredicted RBP16.83■□□□□ 0.28
TMCO1-205ENST00000476143 PICK1Q9NRD5 415 aa16.83■□□□□ 0.28
TMCO1-205ENST00000476143 SNCAIPQ9Y6H5 919 aa16.83■□□□□ 0.28
TMCO1-205ENST00000476143 TESPA1A2RU30 521 aaPredicted RBP16.82■□□□□ 0.28
TMCO1-205ENST00000476143 APBB1O00213 710 aa16.82■□□□□ 0.28
TMCO1-205ENST00000476143 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
TMCO1-205ENST00000476143 GJA5P36382 358 aa16.82■□□□□ 0.28
TMCO1-205ENST00000476143 TMED8Q6PL24 325 aaPredicted RBP16.82■□□□□ 0.28
TMCO1-205ENST00000476143 TEX11Q8IYF3 940 aa16.82■□□□□ 0.28
TMCO1-205ENST00000476143 IL1RAPL2Q9NP60 686 aa16.82■□□□□ 0.28
TMCO1-205ENST00000476143 IGF2BP3O00425 579 aaKnown RBP eCLIP16.81■□□□□ 0.28
TMCO1-205ENST00000476143 IDH1O75874 414 aaKnown RBP16.81■□□□□ 0.28
TMCO1-205ENST00000476143 ZAP70P43403 619 aa16.81■□□□□ 0.28
TMCO1-205ENST00000476143 MAP3K12Q12852 859 aa16.81■□□□□ 0.28
TMCO1-205ENST00000476143 ARHGEF6Q15052 776 aa16.81■□□□□ 0.28
TMCO1-205ENST00000476143 TTF1Q15361 905 aaPredicted RBP16.81■□□□□ 0.28
TMCO1-205ENST00000476143 TAF1CQ15572 869 aaPredicted RBP16.81■□□□□ 0.28
TMCO1-205ENST00000476143 BCL11AQ9H165 835 aa16.81■□□□□ 0.28
TMCO1-205ENST00000476143 ZFYVE28Q9HCC9 887 aa16.81■□□□□ 0.28
TMCO1-205ENST00000476143 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
TMCO1-205ENST00000476143 RFX7Q2KHR2 1363 aa16.8■□□□□ 0.28
TMCO1-205ENST00000476143 CYP2E1P05181 493 aaPredicted RBP16.8■□□□□ 0.28
TMCO1-205ENST00000476143 INPP5BP32019 993 aa16.8■□□□□ 0.28
TMCO1-205ENST00000476143 NOL9Q5SY16 702 aaKnown RBP16.8■□□□□ 0.28
TMCO1-205ENST00000476143 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
TMCO1-205ENST00000476143 ERO1AQ96HE7 468 aa16.8■□□□□ 0.28
TMCO1-205ENST00000476143 TRIM34Q9BYJ4 488 aa16.8■□□□□ 0.28
TMCO1-205ENST00000476143 ZCCHC17Q9NP64 241 aaKnown RBP16.8■□□□□ 0.28
TMCO1-205ENST00000476143 AATFQ9NY61 560 aaKnown RBP eCLIP16.8■□□□□ 0.28
TMCO1-205ENST00000476143 ZNF112Q9UJU3 913 aa16.8■□□□□ 0.28
TMCO1-205ENST00000476143 RHBDL3P58872 404 aa16.79■□□□□ 0.28
TMCO1-205ENST00000476143 CRHR2Q13324 411 aa16.79■□□□□ 0.28
TMCO1-205ENST00000476143 MS4A4AQ96JQ5 239 aa16.79■□□□□ 0.28
TMCO1-205ENST00000476143 DHX36Q9H2U1 1008 aaKnown RBP16.79■□□□□ 0.28
TMCO1-205ENST00000476143 COL2A1P02458 1487 aaPredicted RBP16.79■□□□□ 0.28
TMCO1-205ENST00000476143 ATRNL1Q5VV63 1379 aa16.78■□□□□ 0.28
TMCO1-205ENST00000476143 IRF6O14896 467 aa16.78■□□□□ 0.28
TMCO1-205ENST00000476143 CYP7A1P22680 504 aa16.78■□□□□ 0.28
TMCO1-205ENST00000476143 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
TMCO1-205ENST00000476143 SCYL3Q8IZE3 742 aa16.78■□□□□ 0.28
TMCO1-205ENST00000476143 BRI3BPQ8WY22 251 aa16.78■□□□□ 0.28
TMCO1-205ENST00000476143 YTHDC1Q96MU7 727 aaKnown RBP16.78■□□□□ 0.28
TMCO1-205ENST00000476143 OSBPL5Q9H0X9 879 aaPredicted RBP16.78■□□□□ 0.28
TMCO1-205ENST00000476143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
TMCO1-205ENST00000476143 DDX4Q9NQI0 724 aaKnown RBP16.78■□□□□ 0.28
TMCO1-205ENST00000476143 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.28
TMCO1-205ENST00000476143 TBC1D12O60347 775 aa16.77■□□□□ 0.28
TMCO1-205ENST00000476143 CTNND1O60716 968 aaKnown RBP16.77■□□□□ 0.28
TMCO1-205ENST00000476143 C20orf194Q5TEA3 1177 aa16.77■□□□□ 0.28
TMCO1-205ENST00000476143 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
TMCO1-205ENST00000476143 ZNF384Q8TF68 577 aa16.77■□□□□ 0.28
TMCO1-205ENST00000476143 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.77■□□□□ 0.28
TMCO1-205ENST00000476143 LRRCC1Q9C099 1032 aa16.77■□□□□ 0.28
TMCO1-205ENST00000476143 PIH1D3Q9NQM4 214 aaKnown RBP16.77■□□□□ 0.28
TMCO1-205ENST00000476143 DOCK1Q14185 1865 aa16.76■□□□□ 0.27
TMCO1-205ENST00000476143 HLA-DOAP06340 250 aa16.76■□□□□ 0.27
TMCO1-205ENST00000476143 PPP4CP60510 307 aa16.76■□□□□ 0.27
TMCO1-205ENST00000476143 SP3Q02447 781 aa16.76■□□□□ 0.27
TMCO1-205ENST00000476143 KIF22Q14807 665 aa16.76■□□□□ 0.27
TMCO1-205ENST00000476143 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
TMCO1-205ENST00000476143 PTPN18Q99952 460 aa16.76■□□□□ 0.27
TMCO1-205ENST00000476143 PI4KBQ9UBF8 816 aa16.76■□□□□ 0.27
TMCO1-205ENST00000476143 HERC5Q9UII4 1024 aaKnown RBP16.76■□□□□ 0.27
TMCO1-205ENST00000476143 MYO5AQ9Y4I1 1855 aaKnown RBP16.76■□□□□ 0.27
TMCO1-205ENST00000476143 CXCL11O14625 94 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 USP5P45974 858 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 FBXO46Q6PJ61 603 aaPredicted RBP16.75■□□□□ 0.27
TMCO1-205ENST00000476143 SH3BP5LQ7L8J4 393 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 FASTKD5Q7L8L6 764 aaKnown RBP16.75■□□□□ 0.27
TMCO1-205ENST00000476143 SIRT2Q8IXJ6 389 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 FAM43AQ8N2R8 423 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 CRACR2BQ8N4Y2 399 aaPredicted RBP16.75■□□□□ 0.27
TMCO1-205ENST00000476143 TGFBRAP1Q8WUH2 860 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 DNAJC2Q99543 621 aaKnown RBP16.75■□□□□ 0.27
TMCO1-205ENST00000476143 TBC1D2Q9BYX2 928 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 ZHX2Q9Y6X8 837 aa16.75■□□□□ 0.27
TMCO1-205ENST00000476143 MAP3K10Q02779 954 aa16.74■□□□□ 0.27
TMCO1-205ENST00000476143 ANKRD23Q86SG2 305 aa16.74■□□□□ 0.27
TMCO1-205ENST00000476143 MAPKAPK5Q8IW41 473 aa16.74■□□□□ 0.27
TMCO1-205ENST00000476143 GPATCH3Q96I76 525 aa16.74■□□□□ 0.27
TMCO1-205ENST00000476143 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.74■□□□□ 0.277e-8■■□□□ 12.3
TMCO1-205ENST00000476143 R3HDMLQ9H3Y0 253 aa16.74■□□□□ 0.27
TMCO1-205ENST00000476143 KCNH4Q9UQ05 1017 aa16.74■□□□□ 0.27
TMCO1-205ENST00000476143 FLT1P17948 1338 aa16.73■□□□□ 0.27
TMCO1-205ENST00000476143 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
TMCO1-205ENST00000476143 BTBD19C9JJ37 291 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms