RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 SPATS2LQ9NUQ6 558 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 DBNLQ9UJU6 430 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 NDUFAB1O14561 156 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 MARCKSP29966 332 aaPredicted RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 CCDC96Q2M329 555 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 CPLX3Q8WVH0 158 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 DCAF5Q96JK2 942 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 PPP1R12CQ9BZL4 782 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 PYCARDQ9ULZ3 195 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 DLC1Q96QB1 1528 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 ZEB2O60315 1214 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 DNA2P51530 1060 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 PRPF4BQ13523 1007 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 ARHGEF25Q86VW2 580 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 KIAA1524Q8TCG1 905 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 DDX17Q92841 729 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 GTF3C6Q969F1 213 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 OVOS2A0A0J9YW53 1432 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 OVOS2Q6IE36 1432 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 RNF113AO15541 343 aaKnown RBP6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 A1BGP04217 495 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 KRT83P78385 493 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 ERCC6LQ2NKX8 1250 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 NCOA7Q8NI08 942 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 MPHOSPH8Q99549 860 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 PREX1Q8TCU6 1659 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 CDC42BPGQ6DT37 1551 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 PRC1O43663 620 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 KRT86O43790 486 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 PPFIA2O75334 1257 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 ATP5DP30049 168 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 MATR3P43243 847 aaKnown RBP eCLIP6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 ZNF75DP51815 510 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 AMPD3Q01432 767 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 CCDC40Q4G0X9 1142 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 CFAP58Q5T655 872 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 AFAP1L1Q8TED9 768 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 LMOD1P29536 600 aaPredicted RBP6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 MIER3Q7Z3K6 550 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 LMBR1Q8WVP7 490 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 TMOD3Q9NYL9 352 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 COMMD10Q9Y6G5 202 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 MGEA5O60502 916 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 IGSF3O75054 1194 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 STARD3NLO95772 234 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 CYP21A2P08686 494 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 HSP90AA4PQ58FG1 418 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 SAMD1Q6SPF0 538 aaPredicted RBP6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 CEP128Q6ZU80 1094 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 TMEM87AQ8NBN3 555 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 JAKMIP2Q96AA8 810 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 MTRF1LQ9UGC7 380 aaKnown RBP6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 NRBP1Q9UHY1 535 aa6.88□□□□□ -1.31
HNRNPU-208ENST00000475997 IFT172Q9UG01 1749 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 PABPN1LA6NDY0 278 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 SPTLC2O15270 562 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 MTX1Q13505 466 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 RPAINQ86UA6 219 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 PLBD2Q8NHP8 589 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 ZCRB1Q8TBF4 217 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 NAPBQ9H115 298 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 TSPYL2Q9H2G4 693 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 TRMT112Q9UI30 125 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 SALL3Q9BXA9 1300 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 EYA2O00167 538 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 IFIT3O14879 490 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 RXRAP19793 462 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 IARSP41252 1262 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 EPHA10Q5JZY3 1008 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 CCDC102BQ68D86 513 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 NUF2Q9BZD4 464 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 VCX3AQ9NNX9 186 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 COPRSQ9NQ92 184 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 N4BP3O15049 544 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 IGKV5-2P06315 115 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 BRD2P25440 801 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 METAP2P50579 478 aaKnown RBP eCLIP6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 UBASH3AP57075 661 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 FAM160A1Q05DH4 1040 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 SLC9C2Q5TAH2 1124 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 KCNG4Q8TDN1 519 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 MICAL1Q8TDZ2 1067 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 USP28Q96RU2 1077 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 LRRC27Q9C0I9 530 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 C19orf44Q9H6X5 657 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 ABCF2Q9UG63 623 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 A0A087WWV3 80 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 SYKP43405 635 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 PSMC4P43686 418 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 DBN1Q16643 649 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 ATP2B3Q16720 1220 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 TMEM266Q2M3C6 531 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 FAM89AQ96GI7 184 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 GBP5Q96PP8 586 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 SPAG5Q96R06 1193 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 BCL2L12Q9HB09 334 aa6.87□□□□□ -1.31
HNRNPU-208ENST00000475997 HELLSQ9NRZ9 838 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms