RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 ALDH1L1O75891 902 aa13.21□□□□□ -0.29
CALD1-217ENST00000475772 NBPF7P0C2Y1 421 aaPredicted RBP13.21□□□□□ -0.29
CALD1-217ENST00000475772 HIBADHP31937 336 aaKnown RBP13.21□□□□□ -0.29
CALD1-217ENST00000475772 RBM5P52756 815 aaKnown RBP eCLIP13.21□□□□□ -0.29
CALD1-217ENST00000475772 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.21□□□□□ -0.29
CALD1-217ENST00000475772 FBXO33Q7Z6M2 555 aa13.21□□□□□ -0.29
CALD1-217ENST00000475772 ANKRD13AQ8IZ07 590 aa13.21□□□□□ -0.29
CALD1-217ENST00000475772 FAM198AQ9UFP1 575 aa13.21□□□□□ -0.29
CALD1-217ENST00000475772 TTF2Q9UNY4 1162 aaKnown RBP13.21□□□□□ -0.29
CALD1-217ENST00000475772 UTYO14607 1347 aa13.2□□□□□ -0.3
CALD1-217ENST00000475772 IREB2P48200 963 aaKnown RBP13.2□□□□□ -0.3
CALD1-217ENST00000475772 CRHR2Q13324 411 aa13.2□□□□□ -0.3
CALD1-217ENST00000475772 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
CALD1-217ENST00000475772 GPIHBP1Q8IV16 184 aa13.2□□□□□ -0.3
CALD1-217ENST00000475772 DZIP1LQ8IYY4 767 aaKnown RBP13.2□□□□□ -0.3
CALD1-217ENST00000475772 TTC13Q8NBP0 860 aa13.2□□□□□ -0.3
CALD1-217ENST00000475772 C9orf78Q9NZ63 289 aaPredicted RBP13.2□□□□□ -0.3
CALD1-217ENST00000475772 RABGEF1Q9UJ41 708 aa13.2□□□□□ -0.3
CALD1-217ENST00000475772 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
CALD1-217ENST00000475772 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
CALD1-217ENST00000475772 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
CALD1-217ENST00000475772 LRRC24Q50LG9 513 aa13.19□□□□□ -0.3
CALD1-217ENST00000475772 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
CALD1-217ENST00000475772 SLC4A10Q6U841 1118 aa13.19□□□□□ -0.3
CALD1-217ENST00000475772 CD99L2Q8TCZ2 262 aa13.19□□□□□ -0.3
CALD1-217ENST00000475772 ELP3Q9H9T3 547 aa13.19□□□□□ -0.3
CALD1-217ENST00000475772 ARAP2Q8WZ64 1704 aa13.19□□□□□ -0.3
CALD1-217ENST00000475772 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
CALD1-217ENST00000475772 CRKP46108 304 aa13.18□□□□□ -0.3
CALD1-217ENST00000475772 ANKRD44Q8N8A2 993 aa13.18□□□□□ -0.3
CALD1-217ENST00000475772 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
CALD1-217ENST00000475772 OPTNQ96CV9 577 aa13.18□□□□□ -0.3
CALD1-217ENST00000475772 SRCIN1Q9C0H9 1055 aa13.18□□□□□ -0.3
CALD1-217ENST00000475772 TMEM39BQ9GZU3 492 aa13.18□□□□□ -0.3
CALD1-217ENST00000475772 KIAA1468Q9P260 1216 aa13.18□□□□□ -0.3
CALD1-217ENST00000475772 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
CALD1-217ENST00000475772 HIC1Q14526 733 aa13.17□□□□□ -0.3
CALD1-217ENST00000475772 PADI6Q6TGC4 694 aa13.17□□□□□ -0.3
CALD1-217ENST00000475772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.3
CALD1-217ENST00000475772 BRI3BPQ8WY22 251 aa13.17□□□□□ -0.3
CALD1-217ENST00000475772 BICC1Q9H694 974 aaKnown RBP13.17□□□□□ -0.3
CALD1-217ENST00000475772 RBBP6Q7Z6E9 1792 aaKnown RBP13.17□□□□□ -0.3
CALD1-217ENST00000475772 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 BCAMP50895 628 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 SP3Q02447 781 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 VGLL4Q14135 290 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
CALD1-217ENST00000475772 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
CALD1-217ENST00000475772 MROH5Q6ZUA9 1318 aa13.15□□□□□ -0.3
CALD1-217ENST00000475772 EN2P19622 333 aaPredicted RBP13.15□□□□□ -0.3
CALD1-217ENST00000475772 CACNB3P54284 484 aa13.15□□□□□ -0.3
CALD1-217ENST00000475772 HDLBPQ00341 1268 aaKnown RBP13.15□□□□□ -0.3
CALD1-217ENST00000475772 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
CALD1-217ENST00000475772 OTUD7BQ6GQQ9 843 aa13.15□□□□□ -0.3
CALD1-217ENST00000475772 ARMC5Q96C12 935 aa13.15□□□□□ -0.3
CALD1-217ENST00000475772 MRIQ9BWK5 157 aa13.15□□□□□ -0.3
CALD1-217ENST00000475772 ZSWIM8A7E2V4 1837 aa13.15□□□□□ -0.3
CALD1-217ENST00000475772 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
CALD1-217ENST00000475772 ANP32CO43423 234 aa13.14□□□□□ -0.31
CALD1-217ENST00000475772 PDE8BO95263 885 aa13.14□□□□□ -0.31
CALD1-217ENST00000475772 FGFR2P21802 821 aa13.14□□□□□ -0.31
CALD1-217ENST00000475772 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
CALD1-217ENST00000475772 APOBEC3HQ6NTF7 200 aaKnown RBP13.14□□□□□ -0.31
CALD1-217ENST00000475772 PACS2Q86VP3 889 aa13.14□□□□□ -0.31
CALD1-217ENST00000475772 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
CALD1-217ENST00000475772 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
CALD1-217ENST00000475772 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
CALD1-217ENST00000475772 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
CALD1-217ENST00000475772 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
CALD1-217ENST00000475772 CCL15Q16663 113 aa13.13□□□□□ -0.31
CALD1-217ENST00000475772 FECHP22830 423 aa13.12□□□□□ -0.31
CALD1-217ENST00000475772 TNNI2P48788 182 aa13.12□□□□□ -0.31
CALD1-217ENST00000475772 GTF2A2P52657 109 aa13.12□□□□□ -0.31
CALD1-217ENST00000475772 TAF1CQ15572 869 aaPredicted RBP13.12□□□□□ -0.31
CALD1-217ENST00000475772 METTL24Q5JXM2 366 aa13.12□□□□□ -0.31
CALD1-217ENST00000475772 ZKSCAN4Q969J2 545 aaPredicted RBP13.12□□□□□ -0.31
CALD1-217ENST00000475772 ZNF333Q96JL9 665 aa13.12□□□□□ -0.31
CALD1-217ENST00000475772 ZDHHC15Q96MV8 337 aa13.12□□□□□ -0.31
CALD1-217ENST00000475772 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
CALD1-217ENST00000475772 AK9Q5TCS8 1911 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 CEP290O15078 2479 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 IRF6O14896 467 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 FAM83AQ86UY5 434 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 TBC1D22AQ8WUA7 517 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 TEKT1Q969V4 418 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 ARHGAP39Q9C0H5 1083 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 ZFYVE28Q9HCC9 887 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
CALD1-217ENST00000475772 BTBD19C9JJ37 291 aa13.1□□□□□ -0.31
CALD1-217ENST00000475772 CTGFP29279 349 aa13.1□□□□□ -0.31
CALD1-217ENST00000475772 FKBP1CQ5VVH2 108 aa13.1□□□□□ -0.31
CALD1-217ENST00000475772 HHIPL2Q6UWX4 724 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms