RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 ZSCAN29Q8IWY8 852 aaPredicted RBP17.52■□□□□ 0.4
ABCF3-211ENST00000475728 NDUFB9Q9Y6M9 179 aa17.52■□□□□ 0.4
ABCF3-211ENST00000475728 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.39
ABCF3-211ENST00000475728 AOC2O75106 756 aa17.51■□□□□ 0.39
ABCF3-211ENST00000475728 MAP3K9P80192 1104 aa17.51■□□□□ 0.39
ABCF3-211ENST00000475728 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
ABCF3-211ENST00000475728 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
ABCF3-211ENST00000475728 ZNF341Q9BYN7 854 aa17.51■□□□□ 0.39
ABCF3-211ENST00000475728 AATFQ9NY61 560 aaKnown RBP eCLIP17.51■□□□□ 0.39
ABCF3-211ENST00000475728 CSADQ9Y600 493 aa17.51■□□□□ 0.39
ABCF3-211ENST00000475728 CA12O43570 354 aa17.5■□□□□ 0.39
ABCF3-211ENST00000475728 PICALMQ13492 652 aa17.5■□□□□ 0.39
ABCF3-211ENST00000475728 CDAN1Q8IWY9 1227 aa17.5■□□□□ 0.39
ABCF3-211ENST00000475728 SMC5Q8IY18 1101 aa17.5■□□□□ 0.39
ABCF3-211ENST00000475728 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
ABCF3-211ENST00000475728 THSD7BQ9C0I4 1608 aa17.5■□□□□ 0.39
ABCF3-211ENST00000475728 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
ABCF3-211ENST00000475728 PDE6AP16499 860 aa17.49■□□□□ 0.39
ABCF3-211ENST00000475728 MX1P20591 662 aa17.49■□□□□ 0.39
ABCF3-211ENST00000475728 LRRFIP1Q32MZ4 808 aaKnown RBP17.49■□□□□ 0.39
ABCF3-211ENST00000475728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.39
ABCF3-211ENST00000475728 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-211ENST00000475728 COL2A1P02458 1487 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-211ENST00000475728 ZBTB48P10074 688 aaPredicted RBP17.48■□□□□ 0.39
ABCF3-211ENST00000475728 RGS19P49795 217 aa17.48■□□□□ 0.39
ABCF3-211ENST00000475728 KIF23Q02241 960 aaPredicted RBP17.48■□□□□ 0.39
ABCF3-211ENST00000475728 ADGRA1Q86SQ6 560 aa17.48■□□□□ 0.39
ABCF3-211ENST00000475728 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
ABCF3-211ENST00000475728 DHX36Q9H2U1 1008 aaKnown RBP17.48■□□□□ 0.39
ABCF3-211ENST00000475728 DDX4Q9NQI0 724 aaKnown RBP17.48■□□□□ 0.39
ABCF3-211ENST00000475728 FZD1Q9UP38 647 aa17.48■□□□□ 0.39
ABCF3-211ENST00000475728 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
ABCF3-211ENST00000475728 MAGEB6P1A0A0J9YX57 407 aa17.47■□□□□ 0.39
ABCF3-211ENST00000475728 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-211ENST00000475728 SREBF2Q12772 1141 aa17.47■□□□□ 0.39
ABCF3-211ENST00000475728 SPRYD7Q5W111 196 aa17.47■□□□□ 0.39
ABCF3-211ENST00000475728 MIGA2Q7L4E1 593 aa17.47■□□□□ 0.39
ABCF3-211ENST00000475728 ZFPM1Q8IX07 1006 aa17.47■□□□□ 0.39
ABCF3-211ENST00000475728 MIGA1Q8NAN2 632 aa17.47■□□□□ 0.39
ABCF3-211ENST00000475728 EDC3Q96F86 508 aaKnown RBP17.47■□□□□ 0.39
ABCF3-211ENST00000475728 OSBPL5Q9H0X9 879 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-211ENST00000475728 ZNF532Q9HCE3 1301 aa17.47■□□□□ 0.39
ABCF3-211ENST00000475728 USP5P45974 858 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 INHBEP58166 350 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 VGLL4Q14135 290 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 UBE3CQ15386 1083 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-211ENST00000475728 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 WNK4Q96J92 1243 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 CLMNQ96JQ2 1002 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 CRNKL1Q9BZJ0 848 aaKnown RBP17.46■□□□□ 0.39
ABCF3-211ENST00000475728 ZNF112Q9UJU3 913 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 DOCK2Q92608 1830 aa17.46■□□□□ 0.39
ABCF3-211ENST00000475728 DDTLA6NHG4 134 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-211ENST00000475728 MANSC4A6NHS7 340 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-211ENST00000475728 TBC1D12O60347 775 aa17.45■□□□□ 0.38
ABCF3-211ENST00000475728 IGHDP01880 384 aa17.45■□□□□ 0.38
ABCF3-211ENST00000475728 ZFYP08048 801 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-211ENST00000475728 ADD2P35612 726 aa17.45■□□□□ 0.38
ABCF3-211ENST00000475728 DYNLL1P63167 89 aaKnown RBP17.45■□□□□ 0.38
ABCF3-211ENST00000475728 MAP3K10Q02779 954 aa17.45■□□□□ 0.38
ABCF3-211ENST00000475728 SH3BP5LQ7L8J4 393 aa17.45■□□□□ 0.38
ABCF3-211ENST00000475728 KBTBD3Q8NAB2 608 aa17.45■□□□□ 0.38
ABCF3-211ENST00000475728 STAP2Q9UGK3 403 aa17.45■□□□□ 0.38
ABCF3-211ENST00000475728 FLT1P17948 1338 aa17.45■□□□□ 0.38
ABCF3-211ENST00000475728 TCRBV5S4A2TA0A5A2 114 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 NUCB1Q02818 461 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 TSHZ3Q63HK5 1081 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 CHD1LQ86WJ1 897 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 ERO1BQ86YB8 467 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 MAPKAPK5Q8IW41 473 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 PI4K2BQ8TCG2 481 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 OTUD7AQ8TE49 926 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-211ENST00000475728 ZIC5Q96T25 663 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
ABCF3-211ENST00000475728 LNPKQ9C0E8 428 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 ELP3Q9H9T3 547 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-211ENST00000475728 PI4KBQ9UBF8 816 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 HERC5Q9UII4 1024 aaKnown RBP17.44■□□□□ 0.38
ABCF3-211ENST00000475728 SALL3Q9BXA9 1300 aa17.44■□□□□ 0.38
ABCF3-211ENST00000475728 TNRC18O15417 2968 aaPredicted RBP17.43■□□□□ 0.38
ABCF3-211ENST00000475728 NOL9Q5SY16 702 aaKnown RBP17.43■□□□□ 0.38
ABCF3-211ENST00000475728 B4GALNT3Q6L9W6 998 aa17.43■□□□□ 0.38
ABCF3-211ENST00000475728 OPTNQ96CV9 577 aa17.43■□□□□ 0.38
ABCF3-211ENST00000475728 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
ABCF3-211ENST00000475728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.43■□□□□ 0.38
ABCF3-211ENST00000475728 SAGE1Q9NXZ1 904 aa17.43■□□□□ 0.38
ABCF3-211ENST00000475728 SPDYE5A6NIY4 337 aa17.42■□□□□ 0.38
ABCF3-211ENST00000475728 TM4SF4P48230 202 aa17.42■□□□□ 0.38
ABCF3-211ENST00000475728 PDE1AP54750 535 aa17.42■□□□□ 0.38
ABCF3-211ENST00000475728 MKRN3Q13064 507 aaKnown RBP17.42■□□□□ 0.38
ABCF3-211ENST00000475728 FOXP4Q8IVH2 680 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-211ENST00000475728 ZKSCAN4Q969J2 545 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-211ENST00000475728 PICK1Q9NRD5 415 aa17.42■□□□□ 0.38
ABCF3-211ENST00000475728 TSKSQ9UJT2 592 aa17.42■□□□□ 0.38
ABCF3-211ENST00000475728 SNCAIPQ9Y6H5 919 aa17.42■□□□□ 0.38
ABCF3-211ENST00000475728 CTNND1O60716 968 aaKnown RBP17.41■□□□□ 0.38
ABCF3-211ENST00000475728 ALDH1A1P00352 501 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms