RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 DOCK2Q92608 1830 aa19.07■□□□□ 0.64
CPSF3-203ENST00000475482 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
CPSF3-203ENST00000475482 MAP3K10Q02779 954 aa19.07■□□□□ 0.64
CPSF3-203ENST00000475482 WRNIP1Q96S55 665 aa19.07■□□□□ 0.64
CPSF3-203ENST00000475482 ZNF341Q9BYN7 854 aa19.07■□□□□ 0.64
CPSF3-203ENST00000475482 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
CPSF3-203ENST00000475482 IGSF3O75054 1194 aa19.06■□□□□ 0.64
CPSF3-203ENST00000475482 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
CPSF3-203ENST00000475482 BTDP43251 543 aa19.06■□□□□ 0.64
CPSF3-203ENST00000475482 RGS3P49796 1198 aa19.06■□□□□ 0.64
CPSF3-203ENST00000475482 CCDC158Q5M9N0 1113 aa19.06■□□□□ 0.64
CPSF3-203ENST00000475482 MIGA2Q7L4E1 593 aa19.06■□□□□ 0.64
CPSF3-203ENST00000475482 SH3BP5LQ7L8J4 393 aa19.06■□□□□ 0.64
CPSF3-203ENST00000475482 CTU1Q7Z7A3 348 aaKnown RBP19.06■□□□□ 0.64
CPSF3-203ENST00000475482 ERO1BQ86YB8 467 aa19.06■□□□□ 0.64
CPSF3-203ENST00000475482 SIRT2Q8IXJ6 389 aa19.05■□□□□ 0.64
CPSF3-203ENST00000475482 BRI3BPQ8WY22 251 aa19.05■□□□□ 0.64
CPSF3-203ENST00000475482 ZKSCAN4Q969J2 545 aaPredicted RBP19.05■□□□□ 0.64
CPSF3-203ENST00000475482 DCTPP1Q9H773 170 aa19.05■□□□□ 0.64
CPSF3-203ENST00000475482 DDX4Q9NQI0 724 aaKnown RBP19.05■□□□□ 0.64
CPSF3-203ENST00000475482 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.05■□□□□ 0.64
CPSF3-203ENST00000475482 MAST2Q6P0Q8 1798 aa19.04■□□□□ 0.64
CPSF3-203ENST00000475482 CYP2E1P05181 493 aaPredicted RBP19.04■□□□□ 0.64
CPSF3-203ENST00000475482 LDHCP07864 332 aa19.04■□□□□ 0.64
CPSF3-203ENST00000475482 INPP5BP32019 993 aa19.04■□□□□ 0.64
CPSF3-203ENST00000475482 GTF2A2P52657 109 aa19.04■□□□□ 0.64
CPSF3-203ENST00000475482 GSTO1P78417 241 aa19.04■□□□□ 0.64
CPSF3-203ENST00000475482 TTC39AQ5SRH9 613 aa19.04■□□□□ 0.64
CPSF3-203ENST00000475482 NOL9Q5SY16 702 aaKnown RBP19.04■□□□□ 0.64
CPSF3-203ENST00000475482 ERC1Q8IUD2 1116 aa19.04■□□□□ 0.64
CPSF3-203ENST00000475482 TLR7Q9NYK1 1049 aaKnown RBP19.04■□□□□ 0.64
CPSF3-203ENST00000475482 EXOC6BQ9Y2D4 811 aa19.04■□□□□ 0.64
CPSF3-203ENST00000475482 PHF20L1A8MW92 1017 aa19.03■□□□□ 0.64
CPSF3-203ENST00000475482 FKTNO75072 461 aa19.03■□□□□ 0.64
CPSF3-203ENST00000475482 PPIL2Q13356 520 aa19.03■□□□□ 0.64
CPSF3-203ENST00000475482 OTUD7BQ6GQQ9 843 aa19.03■□□□□ 0.64
CPSF3-203ENST00000475482 OTUD5Q96G74 571 aa19.03■□□□□ 0.64
CPSF3-203ENST00000475482 CCDC8Q9H0W5 538 aaPredicted RBP19.03■□□□□ 0.64
CPSF3-203ENST00000475482 SNRKQ9NRH2 765 aa19.03■□□□□ 0.64
CPSF3-203ENST00000475482 DDTLA6NHG4 134 aaPredicted RBP19.02■□□□□ 0.64
CPSF3-203ENST00000475482 IRF6O14896 467 aa19.02■□□□□ 0.64
CPSF3-203ENST00000475482 PPATQ06203 517 aa19.02■□□□□ 0.64
CPSF3-203ENST00000475482 CRHR2Q13324 411 aa19.02■□□□□ 0.64
CPSF3-203ENST00000475482 PKN2Q16513 984 aaKnown RBP19.02■□□□□ 0.64
CPSF3-203ENST00000475482 HSP90AB4PQ58FF6 505 aa19.02■□□□□ 0.64
CPSF3-203ENST00000475482 RAI14Q9P0K7 980 aa19.02■□□□□ 0.64
CPSF3-203ENST00000475482 LRP2BPQ9P2M1 347 aa19.02■□□□□ 0.64
CPSF3-203ENST00000475482 CDK5RAP2Q96SN8 1893 aa19.02■□□□□ 0.64
CPSF3-203ENST00000475482 COL2A1P02458 1487 aaPredicted RBP19.02■□□□□ 0.63
CPSF3-203ENST00000475482 CCL15-CCL14A0A0B4J2E2 113 aa19.01■□□□□ 0.63
CPSF3-203ENST00000475482 ZAP70P43403 619 aa19.01■□□□□ 0.63
CPSF3-203ENST00000475482 NUCB1Q02818 461 aa19.01■□□□□ 0.63
CPSF3-203ENST00000475482 CCL15Q16663 113 aa19.01■□□□□ 0.63
CPSF3-203ENST00000475482 RHPN1Q8TCX5 695 aa19.01■□□□□ 0.63
CPSF3-203ENST00000475482 ZCCHC17Q9NP64 241 aaKnown RBP19.01■□□□□ 0.63
CPSF3-203ENST00000475482 KCNH4Q9UQ05 1017 aa19.01■□□□□ 0.63
CPSF3-203ENST00000475482 FOCADQ5VW36 1801 aa19■□□□□ 0.63
CPSF3-203ENST00000475482 TBC1D12O60347 775 aa19■□□□□ 0.63
CPSF3-203ENST00000475482 RGS19P49795 217 aa19■□□□□ 0.63
CPSF3-203ENST00000475482 PPP4CP60510 307 aa19■□□□□ 0.63
CPSF3-203ENST00000475482 FAM43AQ8N2R8 423 aa19■□□□□ 0.63
CPSF3-203ENST00000475482 CCDC85CA6NKD9 419 aa18.99■□□□□ 0.63
CPSF3-203ENST00000475482 CETPP11597 493 aa18.99■□□□□ 0.63
CPSF3-203ENST00000475482 SNAPC2Q13487 334 aa18.99■□□□□ 0.63
CPSF3-203ENST00000475482 ANKRD45Q5TZF3 282 aa18.99■□□□□ 0.63
CPSF3-203ENST00000475482 ADGRA1Q86SQ6 560 aa18.99■□□□□ 0.63
CPSF3-203ENST00000475482 PIH1D3Q9NQM4 214 aaKnown RBP18.99■□□□□ 0.63
CPSF3-203ENST00000475482 PHIPQ8WWQ0 1821 aa18.98■□□□□ 0.63
CPSF3-203ENST00000475482 RAB11FIP3O75154 756 aa18.98■□□□□ 0.63
CPSF3-203ENST00000475482 NAA16Q6N069 864 aaPredicted RBP18.98■□□□□ 0.63
CPSF3-203ENST00000475482 AACSQ86V21 672 aa18.98■□□□□ 0.63
CPSF3-203ENST00000475482 CHD1LQ86WJ1 897 aa18.98■□□□□ 0.63
CPSF3-203ENST00000475482 KIF1BPQ96EK5 621 aa18.98■□□□□ 0.63
CPSF3-203ENST00000475482 PTPRFP10586 1907 aa18.98■□□□□ 0.63
CPSF3-203ENST00000475482 DOCK1Q14185 1865 aa18.97■□□□□ 0.63
CPSF3-203ENST00000475482 SLURP2P0DP57 97 aa18.97■□□□□ 0.63
CPSF3-203ENST00000475482 PICALMQ13492 652 aa18.97■□□□□ 0.63
CPSF3-203ENST00000475482 MOGSQ13724 837 aa18.97■□□□□ 0.63
CPSF3-203ENST00000475482 OSBPL5Q9H0X9 879 aaPredicted RBP18.97■□□□□ 0.63
CPSF3-203ENST00000475482 IL1RAPL2Q9NP60 686 aa18.97■□□□□ 0.63
CPSF3-203ENST00000475482 SIPA1L1O43166 1804 aa18.97■□□□□ 0.63
CPSF3-203ENST00000475482 BTBD19C9JJ37 291 aa18.96■□□□□ 0.63
CPSF3-203ENST00000475482 CTNND1O60716 968 aaKnown RBP18.96■□□□□ 0.63
CPSF3-203ENST00000475482 BAG3O95817 575 aa18.96■□□□□ 0.63
CPSF3-203ENST00000475482 TMED8Q6PL24 325 aaPredicted RBP18.96■□□□□ 0.63
CPSF3-203ENST00000475482 ZSCAN29Q8IWY8 852 aaPredicted RBP18.96■□□□□ 0.63
CPSF3-203ENST00000475482 SCYL3Q8IZE3 742 aa18.96■□□□□ 0.63
CPSF3-203ENST00000475482 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
CPSF3-203ENST00000475482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.96■□□□□ 0.63
CPSF3-203ENST00000475482 AATFQ9NY61 560 aaKnown RBP eCLIP18.96■□□□□ 0.63
CPSF3-203ENST00000475482 HTTP42858 3142 aa18.95■□□□□ 0.62
CPSF3-203ENST00000475482 CXCL11O14625 94 aa18.95■□□□□ 0.62
CPSF3-203ENST00000475482 PLCG2P16885 1265 aa18.95■□□□□ 0.62
CPSF3-203ENST00000475482 CAP1Q01518 475 aa18.95■□□□□ 0.62
CPSF3-203ENST00000475482 TAF1CQ15572 869 aaPredicted RBP18.95■□□□□ 0.62
CPSF3-203ENST00000475482 FBXO46Q6PJ61 603 aaPredicted RBP18.95■□□□□ 0.62
CPSF3-203ENST00000475482 TEX11Q8IYF3 940 aa18.95■□□□□ 0.62
CPSF3-203ENST00000475482 CLASRPQ8N2M8 674 aaKnown RBP18.95■□□□□ 0.62
CPSF3-203ENST00000475482 ZFYVE28Q9HCC9 887 aa18.95■□□□□ 0.62
CPSF3-203ENST00000475482 HPS5Q9UPZ3 1129 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms