RNA–Protein interactions for RNA: ENST00000475183.1

TRO-221, Transcript of trophinin, humanhuman

TSL 3

Gene TRO, Length 632 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-221ENST00000475183 ROBO3Q96MS0 1386 aa14.28□□□□□ -0.12
TRO-221ENST00000475183 MTA3Q9BTC8 594 aa14.28□□□□□ -0.12
TRO-221ENST00000475183 MXD3Q9BW11 206 aa14.28□□□□□ -0.12
TRO-221ENST00000475183 USP40Q9NVE5 1235 aa14.28□□□□□ -0.12
TRO-221ENST00000475183 CNOT7Q9UIV1 285 aaKnown RBP14.28□□□□□ -0.12
TRO-221ENST00000475183 GJA3Q9Y6H8 435 aa14.28□□□□□ -0.12
TRO-221ENST00000475183 ATRNL1Q5VV63 1379 aa14.27□□□□□ -0.12
TRO-221ENST00000475183 TNNI2P48788 182 aa14.27□□□□□ -0.13
TRO-221ENST00000475183 TRDNQ13061 729 aa14.27□□□□□ -0.13
TRO-221ENST00000475183 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
TRO-221ENST00000475183 SLFNL1Q499Z3 407 aa14.27□□□□□ -0.13
TRO-221ENST00000475183 FLT1P17948 1338 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 PITPNM2Q9BZ72 1349 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 GLTPD2A6NH11 291 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 WDHD1O75717 1129 aaPredicted RBP14.26□□□□□ -0.13
TRO-221ENST00000475183 CYP21A2P08686 494 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 ANP32AP39687 249 aaKnown RBP14.26□□□□□ -0.13
TRO-221ENST00000475183 MCM2P49736 904 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 PDE4BQ07343 736 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 MICALL2Q8IY33 904 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 HOOK2Q96ED9 719 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 KRT23Q9C075 422 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 EHD4Q9H223 541 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 EPB41L4AQ9HCS5 686 aaPredicted RBP14.26□□□□□ -0.13
TRO-221ENST00000475183 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 ADARB2Q9NS39 739 aaKnown RBP14.26□□□□□ -0.13
TRO-221ENST00000475183 MCM9Q9NXL9 1143 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
TRO-221ENST00000475183 SNX14Q9Y5W7 946 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 ECM29Q5VYK3 1845 aa14.26□□□□□ -0.13
TRO-221ENST00000475183 DDX60LQ5H9U9 1706 aaKnown RBP14.25□□□□□ -0.13
TRO-221ENST00000475183 PRKAB2O43741 272 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 ST18O60284 1047 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 HLA-DOAP06340 250 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 FGRP09769 529 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 PPARAQ07869 468 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 C12orf60Q5U649 245 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 TGFBRAP1Q8WUH2 860 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 STAG1Q8WVM7 1258 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
TRO-221ENST00000475183 PPP2R3BQ9Y5P8 575 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 NAV1Q8NEY1 1877 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 SCN4AP35499 1836 aa14.25□□□□□ -0.13
TRO-221ENST00000475183 LAMB1P07942 1786 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 WNT10BO00744 389 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 ORC4O43929 436 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 KIF4BQ2VIQ3 1234 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 CCDC178Q5BJE1 867 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 AKNAD1Q5T1N1 836 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 CTR9Q6PD62 1173 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 MFSD6Q6ZSS7 791 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 USP50Q70EL3 339 aaPredicted RBP14.24□□□□□ -0.13
TRO-221ENST00000475183 RALYLQ86SE5 291 aaKnown RBP14.24□□□□□ -0.13
TRO-221ENST00000475183 APOBEC3FQ8IUX4 373 aaKnown RBP14.24□□□□□ -0.13
TRO-221ENST00000475183 FBXL16Q8N461 479 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 NCOA7Q8NI08 942 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 ZC3H15Q8WU90 426 aaKnown RBP14.24□□□□□ -0.13
TRO-221ENST00000475183 SDR42E1Q8WUS8 393 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 PRMT6Q96LA8 375 aaPredicted RBP14.24□□□□□ -0.13
TRO-221ENST00000475183 NEK1Q96PY6 1258 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 OSBPL5Q9H0X9 879 aaPredicted RBP14.24□□□□□ -0.13
TRO-221ENST00000475183 ZSWIM6Q9HCJ5 1215 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 ZNF70Q9UC06 446 aaPredicted RBP14.24□□□□□ -0.13
TRO-221ENST00000475183 SWAP70Q9UH65 585 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 CYP46A1Q9Y6A2 500 aa14.24□□□□□ -0.13
TRO-221ENST00000475183 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 USP17L21D6R901 530 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 POLR3DP05423 398 aaPredicted RBP14.23□□□□□ -0.13
TRO-221ENST00000475183 ANKRD1Q15327 319 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 PNMA8AQ86V59 439 aaPredicted RBP14.23□□□□□ -0.13
TRO-221ENST00000475183 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
TRO-221ENST00000475183 FAM151AQ8WW52 585 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 KIF2CQ99661 725 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 PI4KBQ9UBF8 816 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 HACL1Q9UJ83 578 aa14.23□□□□□ -0.13
TRO-221ENST00000475183 WDR90Q96KV7 1748 aa14.22□□□□□ -0.13
TRO-221ENST00000475183 E7EWF7 191 aa14.22□□□□□ -0.13
TRO-221ENST00000475183 BECN1Q14457 450 aa14.22□□□□□ -0.13
TRO-221ENST00000475183 SART3Q15020 963 aaKnown RBP14.22□□□□□ -0.13
TRO-221ENST00000475183 RUFY3Q7L099 469 aa14.22□□□□□ -0.13
TRO-221ENST00000475183 MAPKAPK5Q8IW41 473 aa14.22□□□□□ -0.13
TRO-221ENST00000475183 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
TRO-221ENST00000475183 ESR2Q92731 530 aa14.22□□□□□ -0.13
TRO-221ENST00000475183 SNX21Q969T3 373 aa14.22□□□□□ -0.13
TRO-221ENST00000475183 TDRD3Q9H7E2 651 aaKnown RBP14.22□□□□□ -0.13
TRO-221ENST00000475183 HERC5Q9UII4 1024 aaKnown RBP14.22□□□□□ -0.13
TRO-221ENST00000475183 DDNO94850 711 aaPredicted RBP14.21□□□□□ -0.13
TRO-221ENST00000475183 MCM5P33992 734 aa14.21□□□□□ -0.13
TRO-221ENST00000475183 DHX32Q7L7V1 743 aaKnown RBP14.21□□□□□ -0.13
TRO-221ENST00000475183 METTL16Q86W50 562 aaKnown RBP14.21□□□□□ -0.13
TRO-221ENST00000475183 JAKMIP1Q96N16 626 aaKnown RBP14.21□□□□□ -0.13
TRO-221ENST00000475183 SERPINB13Q9UIV8 391 aa14.21□□□□□ -0.13
TRO-221ENST00000475183 PALD1Q9ULE6 856 aa14.21□□□□□ -0.13
TRO-221ENST00000475183 RBM19Q9Y4C8 960 aaKnown RBP14.21□□□□□ -0.13
TRO-221ENST00000475183 MYH1P12882 1939 aa14.2□□□□□ -0.14
TRO-221ENST00000475183 MINDY4BA8MYZ0 360 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms