RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 NSUN4Q96CB9 384 aaKnown RBP17.23■□□□□ 0.35
DNMT3A-211ENST00000474887 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
DNMT3A-211ENST00000474887 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
DNMT3A-211ENST00000474887 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
DNMT3A-211ENST00000474887 TLR2O60603 784 aa17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 BAG3O95817 575 aa17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 INPP5BP32019 993 aa17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 ANKRD23Q86SG2 305 aa17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 CERS3Q8IU89 383 aa17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 ZSCAN29Q8IWY8 852 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 NOL10Q9BSC4 688 aaKnown RBP17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 RAI14Q9P0K7 980 aa17.22■□□□□ 0.35
DNMT3A-211ENST00000474887 RFX7Q2KHR2 1363 aa17.21■□□□□ 0.35
DNMT3A-211ENST00000474887 CTNND1O60716 968 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-211ENST00000474887 KIF22Q14807 665 aa17.21■□□□□ 0.35
DNMT3A-211ENST00000474887 TTC39AQ5SRH9 613 aa17.21■□□□□ 0.35
DNMT3A-211ENST00000474887 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
DNMT3A-211ENST00000474887 PTPN22Q9Y2R2 807 aa17.21■□□□□ 0.35
DNMT3A-211ENST00000474887 ATRNL1Q5VV63 1379 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 PHF20L1A8MW92 1017 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 BTBD19C9JJ37 291 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 RLBP1P12271 317 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 MCAMP43121 646 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 PRMT2P55345 433 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 RHBDL3P58872 404 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 FASTKD5Q7L8L6 764 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 ZFPM1Q8IX07 1006 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 SCYL3Q8IZE3 742 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 TBC1D2Q9BYX2 928 aa17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
DNMT3A-211ENST00000474887 OTOFQ9HC10 1997 aa17.19■□□□□ 0.34
DNMT3A-211ENST00000474887 PPP4CP60510 307 aa17.19■□□□□ 0.34
DNMT3A-211ENST00000474887 CEP85Q6P2H3 762 aa17.19■□□□□ 0.34
DNMT3A-211ENST00000474887 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-211ENST00000474887 CD99L2Q8TCZ2 262 aa17.19■□□□□ 0.34
DNMT3A-211ENST00000474887 DHX36Q9H2U1 1008 aaKnown RBP17.19■□□□□ 0.34
DNMT3A-211ENST00000474887 COL2A1P02458 1487 aaPredicted RBP17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 NAA16Q6N069 864 aaPredicted RBP17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 TBC1D9Q6ZT07 1266 aa17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 ZNF384Q8TF68 577 aa17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 DBNDD2Q9BQY9 259 aa17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 SLC45A1Q9Y2W3 748 aa17.18■□□□□ 0.34
DNMT3A-211ENST00000474887 HMMRO75330 724 aa17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 PTPRAP18433 802 aa17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 SOX10P56693 466 aa17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 PI16Q6UXB8 463 aa17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 SH3BP5LQ7L8J4 393 aa17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 NBPF11Q86T75 865 aa17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 ARMC5Q96C12 935 aa17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 OSBPL5Q9H0X9 879 aaPredicted RBP17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 DDX4Q9NQI0 724 aaKnown RBP17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 HERC5Q9UII4 1024 aaKnown RBP17.17■□□□□ 0.34
DNMT3A-211ENST00000474887 DDTLA6NHG4 134 aaPredicted RBP17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 PDHXO00330 501 aa17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 PICALMQ13492 652 aa17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 C17orf99Q6UX52 265 aa17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 TEX11Q8IYF3 940 aa17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 PARK7Q99497 189 aaKnown RBP17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 PI4KBQ9UBF8 816 aa17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 ZHX2Q9Y6X8 837 aa17.16■□□□□ 0.34
DNMT3A-211ENST00000474887 A0A0G2JLL6 359 aaPredicted RBP17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 HOXD10P28358 340 aa17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 PRRT2Q7Z6L0 340 aaPredicted RBP17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 FOXP4Q8IVH2 680 aaPredicted RBP17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 EAF2Q96CJ1 260 aaPredicted RBP17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 GINM1Q9NU53 330 aa17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 AFG3L2Q9Y4W6 797 aa17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 AK9Q5TCS8 1911 aa17.15■□□□□ 0.34
DNMT3A-211ENST00000474887 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
DNMT3A-211ENST00000474887 LACTBP83111 547 aaPredicted RBP17.14■□□□□ 0.33
DNMT3A-211ENST00000474887 MOGSQ13724 837 aa17.14■□□□□ 0.33
DNMT3A-211ENST00000474887 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
DNMT3A-211ENST00000474887 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
DNMT3A-211ENST00000474887 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
DNMT3A-211ENST00000474887 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
DNMT3A-211ENST00000474887 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
DNMT3A-211ENST00000474887 ZAP70P43403 619 aa17.12■□□□□ 0.33
DNMT3A-211ENST00000474887 MAP3K12Q12852 859 aa17.12■□□□□ 0.33
DNMT3A-211ENST00000474887 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-211ENST00000474887 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-211ENST00000474887 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-211ENST00000474887 KIF1BPQ96EK5 621 aa17.12■□□□□ 0.33
DNMT3A-211ENST00000474887 CCDC8Q9H0W5 538 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-211ENST00000474887 PDE4DIPQ5VU43 2346 aa17.12■□□□□ 0.33
DNMT3A-211ENST00000474887 CAP2P40123 477 aa17.11■□□□□ 0.33
DNMT3A-211ENST00000474887 GPAT2Q6NUI2 795 aa17.11■□□□□ 0.33
DNMT3A-211ENST00000474887 RHPN1Q8TCX5 695 aa17.11■□□□□ 0.33
DNMT3A-211ENST00000474887 SH3RF3Q8TEJ3 882 aaPredicted RBP17.11■□□□□ 0.33
DNMT3A-211ENST00000474887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.11■□□□□ 0.33
DNMT3A-211ENST00000474887 TMEM106CQ9BVX2 250 aa17.11■□□□□ 0.33
DNMT3A-211ENST00000474887 AATFQ9NY61 560 aaKnown RBP eCLIP17.11■□□□□ 0.33
DNMT3A-211ENST00000474887 PABPC4Q13310 644 aaKnown RBP eCLIP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms