RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 SREBF2Q12772 1141 aa7.39□□□□□ -1.23
CPSF7-210ENST00000474684 NFIAQ12857 509 aa7.39□□□□□ -1.23
CPSF7-210ENST00000474684 VGLL4Q14135 290 aa7.39□□□□□ -1.23
CPSF7-210ENST00000474684 APOBEC3HQ6NTF7 200 aaKnown RBP7.39□□□□□ -1.23
CPSF7-210ENST00000474684 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-210ENST00000474684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.39□□□□□ -1.23
CPSF7-210ENST00000474684 TEKT1Q969V4 418 aa7.39□□□□□ -1.23
CPSF7-210ENST00000474684 IRX2Q9BZI1 471 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-210ENST00000474684 DAGLAQ9Y4D2 1042 aa7.39□□□□□ -1.23
CPSF7-210ENST00000474684 SNCAIPQ9Y6H5 919 aa7.39□□□□□ -1.23
CPSF7-210ENST00000474684 ATRNL1Q5VV63 1379 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-210ENST00000474684 FRAT2O75474 233 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-210ENST00000474684 CIAO1O76071 339 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 SLURP2P0DP57 97 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 ZBTB48P10074 688 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-210ENST00000474684 IREB2P48200 963 aaKnown RBP7.38□□□□□ -1.23
CPSF7-210ENST00000474684 TNFAIP1Q13829 316 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 RASGRF1Q13972 1273 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 CAVIN4Q5BKX8 364 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 INTS3Q68E01 1043 aaKnown RBP7.38□□□□□ -1.23
CPSF7-210ENST00000474684 PI16Q6UXB8 463 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 ANKRD13AQ8IZ07 590 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 TBC1D22AQ8WUA7 517 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 BRI3BPQ8WY22 251 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 LPIN2Q92539 896 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 CLUAP1Q96AJ1 413 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 OPTNQ96CV9 577 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 ZDHHC15Q96MV8 337 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 PTPN18Q99952 460 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 CFHR5Q9BXR6 569 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 COPRSQ9NQ92 184 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 HPS5Q9UPZ3 1129 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 PLXNB2O15031 1838 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 FRMPD3Q5JV73 1810 aa7.38□□□□□ -1.23
CPSF7-210ENST00000474684 PARP14Q460N5 1801 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 PNMA6EA0A0J9YXQ4 647 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 MANSC4A6NHS7 340 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-210ENST00000474684 RGS19P49795 217 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 HDLBPQ00341 1268 aaKnown RBP7.37□□□□□ -1.23
CPSF7-210ENST00000474684 CRHR2Q13324 411 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 MTX1Q13505 466 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 SUPT20HL1Q3ZLR7 823 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 IFNLR1Q8IU57 520 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-210ENST00000474684 TMEM57Q8N5G2 664 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 FRAT1Q92837 279 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-210ENST00000474684 SLC10A4Q96EP9 437 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 C1orf115Q9H7X2 142 aa7.37□□□□□ -1.23
CPSF7-210ENST00000474684 MAST3O60307 1309 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 SALL1Q9NSC2 1324 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 TRIOBPQ9H2D6 2365 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 CCL15-CCL14A0A0B4J2E2 113 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 A0A1B0GUL7 405 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 SPDYE5A6NIY4 337 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 RIOK3O14730 519 aaKnown RBP7.36□□□□□ -1.23
CPSF7-210ENST00000474684 SRGAP3O43295 1099 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 HRO43593 1189 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 FKTNO75072 461 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 RLBP1P12271 317 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 INPP5BP32019 993 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 IL15P40933 162 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-210ENST00000474684 TNNI2P48788 182 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 HNRNPUQ00839 825 aaKnown RBP eCLIP7.36□□□□□ -1.23
CPSF7-210ENST00000474684 MLLT1Q03111 559 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-210ENST00000474684 TCP10Q12799 353 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 TFCP2Q12800 502 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 CCL15Q16663 113 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 CCDC102BQ68D86 513 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 CDC42EP5Q6NZY7 148 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 HHIPL2Q6UWX4 724 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 ATF7IPQ6VMQ6 1270 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 ZFPM1Q8IX07 1006 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 FAM43AQ8N2R8 423 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 WDR66Q8TBY9 1149 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 CD99L2Q8TCZ2 262 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 ZNF384Q8TF68 577 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 ZKSCAN4Q969J2 545 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-210ENST00000474684 WRNIP1Q96S55 665 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 CEP126Q9P2H0 1117 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 FAM198AQ9UFP1 575 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 PCDHGA4Q9Y5G9 962 aa7.36□□□□□ -1.23
CPSF7-210ENST00000474684 GAKO14976 1311 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 TESPA1A2RU30 521 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-210ENST00000474684 TIMM10P62072 90 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 MAP3K9P80192 1104 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 NOM1Q5C9Z4 860 aaKnown RBP7.35□□□□□ -1.23
CPSF7-210ENST00000474684 FBXO46Q6PJ61 603 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-210ENST00000474684 MIGA2Q7L4E1 593 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 OTOP1Q7RTM1 612 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 FAM83AQ86UY5 434 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 ARHGAP45Q92619 1136 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 XAGE2Q96GT9 111 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 DDX4Q9NQI0 724 aaKnown RBP7.35□□□□□ -1.23
CPSF7-210ENST00000474684 TMOD2Q9NZR1 351 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-210ENST00000474684 SUGT1Q9Y2Z0 365 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 TRIM17Q9Y577 477 aa7.35□□□□□ -1.23
CPSF7-210ENST00000474684 IRF6O14896 467 aa7.34□□□□□ -1.23
CPSF7-210ENST00000474684 ECM2O94769 699 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-210ENST00000474684 LDHBP07195 334 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms