RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 PDE8BO95263 885 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 PTPRAP18433 802 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 SLC4A10Q6U841 1118 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 ANKRD13CQ8N6S4 541 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 WDR66Q8TBY9 1149 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 DAGLAQ9Y4D2 1042 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 AFG3L2Q9Y4W6 797 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 IL16Q14005 1332 aa16.68■□□□□ 0.26
RTN4R-206ENST00000474642 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
RTN4R-206ENST00000474642 HMGCRP04035 888 aa16.67■□□□□ 0.26
RTN4R-206ENST00000474642 IFIT1P09914 478 aaKnown RBP16.67■□□□□ 0.26
RTN4R-206ENST00000474642 DIXDC1Q155Q3 683 aa16.67■□□□□ 0.26
RTN4R-206ENST00000474642 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
RTN4R-206ENST00000474642 C11orf49Q9H6J7 331 aa16.67■□□□□ 0.26
RTN4R-206ENST00000474642 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
RTN4R-206ENST00000474642 HMX1Q9NP08 348 aaPredicted RBP16.67■□□□□ 0.26
RTN4R-206ENST00000474642 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
RTN4R-206ENST00000474642 FAM198AQ9UFP1 575 aa16.67■□□□□ 0.26
RTN4R-206ENST00000474642 PHF20L1A8MW92 1017 aa16.66■□□□□ 0.26
RTN4R-206ENST00000474642 VGLL2Q8N8G2 317 aa16.66■□□□□ 0.26
RTN4R-206ENST00000474642 LRRFIP2Q9Y608 721 aaKnown RBP16.66■□□□□ 0.26
RTN4R-206ENST00000474642 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
RTN4R-206ENST00000474642 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
RTN4R-206ENST00000474642 UNC80Q8N2C7 3258 aa16.65■□□□□ 0.26
RTN4R-206ENST00000474642 TRIM75PA6NK02 468 aa16.65■□□□□ 0.26
RTN4R-206ENST00000474642 FAM110CQ1W6H9 321 aa16.65■□□□□ 0.26
RTN4R-206ENST00000474642 ZSCAN29Q8IWY8 852 aaPredicted RBP16.65■□□□□ 0.26
RTN4R-206ENST00000474642 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
RTN4R-206ENST00000474642 KAZALD1Q96I82 304 aa16.65■□□□□ 0.26
RTN4R-206ENST00000474642 PNMA3Q9UL41 463 aa16.65■□□□□ 0.26
RTN4R-206ENST00000474642 AGTPBP1Q9UPW5 1226 aa16.65■□□□□ 0.26
RTN4R-206ENST00000474642 PUM3Q15397 648 aaKnown RBP16.64■□□□□ 0.25
RTN4R-206ENST00000474642 BICC1Q9H694 974 aaKnown RBP16.64■□□□□ 0.25
RTN4R-206ENST00000474642 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
RTN4R-206ENST00000474642 PTPRFP10586 1907 aa16.64■□□□□ 0.25
RTN4R-206ENST00000474642 KIF16BQ96L93 1317 aa16.64■□□□□ 0.25
RTN4R-206ENST00000474642 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
RTN4R-206ENST00000474642 DDX60LQ5H9U9 1706 aaKnown RBP16.63■□□□□ 0.25
RTN4R-206ENST00000474642 LDHBP07195 334 aaKnown RBP16.63■□□□□ 0.25
RTN4R-206ENST00000474642 NBPF7P0C2Y1 421 aaPredicted RBP16.63■□□□□ 0.25
RTN4R-206ENST00000474642 EXOSC9Q06265 439 aaKnown RBP16.63■□□□□ 0.25
RTN4R-206ENST00000474642 CTNND1O60716 968 aaKnown RBP16.62■□□□□ 0.25
RTN4R-206ENST00000474642 SLC5A1P13866 664 aa16.62■□□□□ 0.25
RTN4R-206ENST00000474642 FGFR2P21802 821 aa16.62■□□□□ 0.25
RTN4R-206ENST00000474642 PRDX5P30044 214 aa16.62■□□□□ 0.25
RTN4R-206ENST00000474642 RGS3P49796 1198 aa16.62■□□□□ 0.25
RTN4R-206ENST00000474642 TRIM32Q13049 653 aa16.62■□□□□ 0.25
RTN4R-206ENST00000474642 OGDHLQ9ULD0 1010 aa16.62■□□□□ 0.25
RTN4R-206ENST00000474642 ATRNL1Q5VV63 1379 aa16.62■□□□□ 0.25
RTN4R-206ENST00000474642 ENTPD3O75355 529 aa16.61■□□□□ 0.25
RTN4R-206ENST00000474642 GCLCP48506 637 aaPredicted RBP16.61■□□□□ 0.25
RTN4R-206ENST00000474642 MDM2Q00987 491 aaPredicted RBP16.61■□□□□ 0.25
RTN4R-206ENST00000474642 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
RTN4R-206ENST00000474642 TREML2Q5T2D2 321 aa16.61■□□□□ 0.25
RTN4R-206ENST00000474642 KLHDC4Q8TBB5 520 aa16.61■□□□□ 0.25
RTN4R-206ENST00000474642 FAM161BQ96MY7 647 aa16.61■□□□□ 0.25
RTN4R-206ENST00000474642 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
RTN4R-206ENST00000474642 FAM109BQ6ICB4 259 aaPredicted RBP16.6■□□□□ 0.25
RTN4R-206ENST00000474642 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
RTN4R-206ENST00000474642 GUCD1Q96NT3 240 aa16.6■□□□□ 0.25
RTN4R-206ENST00000474642 IDI2Q9BXS1 227 aa16.6■□□□□ 0.25
RTN4R-206ENST00000474642 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.6■□□□□ 0.25
RTN4R-206ENST00000474642 GJD2Q9UKL4 321 aa16.6■□□□□ 0.25
RTN4R-206ENST00000474642 POTEB2H3BUK9 544 aa16.59■□□□□ 0.25
RTN4R-206ENST00000474642 ANKRD44Q8N8A2 993 aa16.59■□□□□ 0.25
RTN4R-206ENST00000474642 PROCA1Q8NCQ7 364 aaPredicted RBP16.59■□□□□ 0.25
RTN4R-206ENST00000474642 LPIN2Q92539 896 aa16.59■□□□□ 0.25
RTN4R-206ENST00000474642 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
RTN4R-206ENST00000474642 UTYO14607 1347 aa16.59■□□□□ 0.25
RTN4R-206ENST00000474642 PFASO15067 1338 aa16.59■□□□□ 0.25
RTN4R-206ENST00000474642 DOCK1Q14185 1865 aa16.59■□□□□ 0.25
RTN4R-206ENST00000474642 SLURP2P0DP57 97 aa16.58■□□□□ 0.24
RTN4R-206ENST00000474642 CYP2B6P20813 491 aa16.58■□□□□ 0.24
RTN4R-206ENST00000474642 MAP3K10Q02779 954 aa16.58■□□□□ 0.24
RTN4R-206ENST00000474642 PABPC4Q13310 644 aaKnown RBP eCLIP16.58■□□□□ 0.24
RTN4R-206ENST00000474642 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.24
RTN4R-206ENST00000474642 TRIB2Q92519 343 aa16.58■□□□□ 0.24
RTN4R-206ENST00000474642 PHIPQ8WWQ0 1821 aa16.58■□□□□ 0.24
RTN4R-206ENST00000474642 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
RTN4R-206ENST00000474642 PRKAR2AP13861 404 aaKnown RBP16.57■□□□□ 0.24
RTN4R-206ENST00000474642 PICALMQ13492 652 aa16.57■□□□□ 0.24
RTN4R-206ENST00000474642 ZNF697Q5TEC3 545 aa16.57■□□□□ 0.24
RTN4R-206ENST00000474642 SALL2Q9Y467 1007 aaPredicted RBP16.57■□□□□ 0.24
RTN4R-206ENST00000474642 MYH2Q9UKX2 1941 aa16.57■□□□□ 0.24
RTN4R-206ENST00000474642 SPP2Q13103 211 aa16.56■□□□□ 0.24
RTN4R-206ENST00000474642 LRRC26Q2I0M4 334 aa16.56■□□□□ 0.24
RTN4R-206ENST00000474642 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
RTN4R-206ENST00000474642 LBHD1Q9BQE6 289 aaPredicted RBP16.56■□□□□ 0.24
RTN4R-206ENST00000474642 ASCC2Q9H1I8 757 aaPredicted RBP16.56■□□□□ 0.24
RTN4R-206ENST00000474642 PRDM6Q9NQX0 595 aa16.56■□□□□ 0.24
RTN4R-206ENST00000474642 SALL1Q9NSC2 1324 aa16.55■□□□□ 0.24
RTN4R-206ENST00000474642 EYA2O00167 538 aa16.55■□□□□ 0.24
RTN4R-206ENST00000474642 COL6A1P12109 1028 aa16.55■□□□□ 0.24
RTN4R-206ENST00000474642 HMGCS2P54868 508 aa16.55■□□□□ 0.24
RTN4R-206ENST00000474642 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
RTN4R-206ENST00000474642 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
RTN4R-206ENST00000474642 ZNF280CQ8ND82 737 aa16.55■□□□□ 0.24
RTN4R-206ENST00000474642 NUDT12Q9BQG2 462 aa16.55■□□□□ 0.24
RTN4R-206ENST00000474642 DENND2AQ9ULE3 1009 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms