RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 AKR1B15C9JRZ8 316 aaPredicted RBP4□□□□□ -1.77
UBR3-208ENST00000474426 H7C1W4 665 aa4□□□□□ -1.77
UBR3-208ENST00000474426 AGR2O95994 175 aa4□□□□□ -1.77
UBR3-208ENST00000474426 RCN1Q15293 331 aa4□□□□□ -1.77
UBR3-208ENST00000474426 TERF2Q15554 542 aa4□□□□□ -1.77
UBR3-208ENST00000474426 CNGA3Q16281 694 aa4□□□□□ -1.77
UBR3-208ENST00000474426 DBN1Q16643 649 aa4□□□□□ -1.77
UBR3-208ENST00000474426 CCDC122Q5T0U0 273 aa4□□□□□ -1.77
UBR3-208ENST00000474426 LURAP1LQ8IV03 231 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ANKRD24Q8TF21 1146 aa4□□□□□ -1.77
UBR3-208ENST00000474426 DDX12PQ92771 950 aa4□□□□□ -1.77
UBR3-208ENST00000474426 NUDT16Q96DE0 195 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 UCN2Q96RP3 112 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ZNF700Q9H0M5 742 aa4□□□□□ -1.77
UBR3-208ENST00000474426 NLRP2Q9NX02 1062 aa4□□□□□ -1.77
UBR3-208ENST00000474426 FBXO10Q9UK96 956 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ZMIZ1Q9ULJ6 1067 aa4□□□□□ -1.77
UBR3-208ENST00000474426 PALM3A6NDB9 673 aaPredicted RBP4□□□□□ -1.77
UBR3-208ENST00000474426 F8W031 263 aaPredicted RBP4□□□□□ -1.77
UBR3-208ENST00000474426 SNUPNO95149 360 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 GNRH1P01148 92 aa4□□□□□ -1.77
UBR3-208ENST00000474426 PCP11498 1178 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 SCG2P13521 617 aa4□□□□□ -1.77
UBR3-208ENST00000474426 DNAJB2P25686 324 aa4□□□□□ -1.77
UBR3-208ENST00000474426 SEPHS1P49903 392 aa4□□□□□ -1.77
UBR3-208ENST00000474426 FANCCQ00597 558 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ARHGEF18Q6ZSZ5 1173 aa4□□□□□ -1.77
UBR3-208ENST00000474426 MCF2L2Q86YR7 1114 aa4□□□□□ -1.77
UBR3-208ENST00000474426 LRRC43Q8N309 656 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ERMNQ8TAM6 284 aa4□□□□□ -1.77
UBR3-208ENST00000474426 STK32AQ8WU08 396 aa4□□□□□ -1.77
UBR3-208ENST00000474426 TRERF1Q96PN7 1200 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ZC3H7BQ9UGR2 993 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 PFDN2Q9UHV9 154 aa4□□□□□ -1.77
UBR3-208ENST00000474426 TIMM22Q9Y584 194 aa4□□□□□ -1.77
UBR3-208ENST00000474426 EVC2Q86UK5 1308 aa4□□□□□ -1.77
UBR3-208ENST00000474426 PARP1P09874 1014 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 SFTPCP11686 197 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 PCNAP12004 261 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 MXI1P50539 228 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 EXOSC10Q01780 885 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 TMEM62Q0P6H9 643 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 USP4Q13107 963 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 LAMC2Q13753 1193 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 LBRQ14739 615 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 NOLC1Q14978 699 aaKnown RBP eCLIP3.99□□□□□ -1.77
UBR3-208ENST00000474426 KBTBD12Q3ZCT8 623 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 LEKR1Q6ZMV7 388 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 TNIP2Q8NFZ5 429 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 MRFAP1L1Q96HT8 127 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 FAM161BQ96MY7 647 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 AP1M1Q9BXS5 423 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 PANK2Q9BZ23 570 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 CNNM2Q9H8M5 875 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 SCHIP1Q9P0W5 487 aaPredicted RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 HECAQ9UBI9 543 aaPredicted RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 R3HCC1Q9Y3T6 440 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 EME2A4GXA9 379 aaPredicted RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 PRPF3O43395 683 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 KPNA6O60684 536 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 NBNO60934 754 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 PRPF40AO75400 957 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 KATNA1O75449 491 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 PECAM1P16284 738 aaPredicted RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 SERPINB3P29508 390 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 CAP2P40123 477 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 CD86P42081 329 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 CLDN10P78369 228 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 KIAA0753Q2KHM9 967 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 SLFNL1Q499Z3 407 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 EMC10Q5UCC4 262 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 TAOK1Q7L7X3 1001 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 KIAA0825Q8IV33 1275 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 KRT222Q8N1A0 295 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 NAT8LQ8N9F0 302 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 OR8H1Q8NGG4 311 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 RBM14Q96PK6 669 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 NEK1Q96PY6 1258 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 SELENOOQ9BVL4 669 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 SIRT5Q9NXA8 310 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 POLKQ9UBT6 870 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.99□□□□□ -1.77
UBR3-208ENST00000474426 HERC5Q9UII4 1024 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 SNCAIPQ9Y6H5 919 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 PHLDB1Q86UU1 1377 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 ALDH1L1O75891 902 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 APBB3O95704 486 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 IL33O95760 270 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 MYCP01106 439 aaPredicted RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 FDX1P10109 184 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 CD9P21926 228 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 SLC4A3P48751 1232 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 RAC1P63000 192 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 SNX1Q13596 522 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 VWA3BQ502W6 1294 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 KSR2Q6VAB6 950 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 GIGYF2Q6Y7W6 1299 aaKnown RBP3.99□□□□□ -1.77
UBR3-208ENST00000474426 C1orf122Q6ZSJ8 110 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 SPATA21Q7Z572 469 aa3.99□□□□□ -1.77
UBR3-208ENST00000474426 ZNF467Q7Z7K2 595 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms