RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
RNF220-210ENST00000474394 NFIAQ12857 509 aa13.1□□□□□ -0.31
RNF220-210ENST00000474394 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
RNF220-210ENST00000474394 SLC10A4Q96EP9 437 aa13.1□□□□□ -0.31
RNF220-210ENST00000474394 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
RNF220-210ENST00000474394 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
RNF220-210ENST00000474394 TBC1D8O95759 1140 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 PLCG2P16885 1265 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 ATP5JP18859 108 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 RGS3P49796 1198 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 RHBDL3P58872 404 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 TMED8Q6PL24 325 aaPredicted RBP13.09□□□□□ -0.31
RNF220-210ENST00000474394 ANKRD13AQ8IZ07 590 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
RNF220-210ENST00000474394 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
RNF220-210ENST00000474394 MAST2Q6P0Q8 1798 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 COL6A3P12111 3177 aa13.09□□□□□ -0.31
RNF220-210ENST00000474394 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
RNF220-210ENST00000474394 WDHD1O75717 1129 aaPredicted RBP13.08□□□□□ -0.32
RNF220-210ENST00000474394 CYP7A1P22680 504 aa13.08□□□□□ -0.32
RNF220-210ENST00000474394 HDAC1Q13547 482 aaPredicted RBP13.08□□□□□ -0.32
RNF220-210ENST00000474394 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
RNF220-210ENST00000474394 BOLA2Q9H3K6 86 aa13.08□□□□□ -0.32
RNF220-210ENST00000474394 AATFQ9NY61 560 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF220-210ENST00000474394 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
RNF220-210ENST00000474394 RFX7Q2KHR2 1363 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 AK9Q5TCS8 1911 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 GOLIM4O00461 696 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 NEFLP07196 543 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 PPP4CP60510 307 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 PICALMQ13492 652 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
RNF220-210ENST00000474394 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 ZSCAN29Q8IWY8 852 aaPredicted RBP13.07□□□□□ -0.32
RNF220-210ENST00000474394 TEX11Q8IYF3 940 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 MAGEB6Q8N7X4 407 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 CLMNQ96JQ2 1002 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 HAUS7Q99871 368 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 DDX4Q9NQI0 724 aaKnown RBP13.07□□□□□ -0.32
RNF220-210ENST00000474394 ECHDC1Q9NTX5 307 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 PAG1Q9NWQ8 432 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 COLQQ9Y215 455 aaPredicted RBP13.07□□□□□ -0.32
RNF220-210ENST00000474394 CSADQ9Y600 493 aa13.07□□□□□ -0.32
RNF220-210ENST00000474394 MYO5AQ9Y4I1 1855 aaKnown RBP13.07□□□□□ -0.32
RNF220-210ENST00000474394 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
RNF220-210ENST00000474394 GPR25O00155 361 aa13.06□□□□□ -0.32
RNF220-210ENST00000474394 MKRN3Q13064 507 aaKnown RBP13.06□□□□□ -0.32
RNF220-210ENST00000474394 SPRYD7Q5W111 196 aa13.06□□□□□ -0.32
RNF220-210ENST00000474394 MIGA2Q7L4E1 593 aa13.06□□□□□ -0.32
RNF220-210ENST00000474394 ADGRA1Q86SQ6 560 aa13.06□□□□□ -0.32
RNF220-210ENST00000474394 ZFPM1Q8IX07 1006 aa13.06□□□□□ -0.32
RNF220-210ENST00000474394 SLC17A8Q8NDX2 589 aa13.06□□□□□ -0.32
RNF220-210ENST00000474394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.06□□□□□ -0.326e-9■□□□□ 9.7
RNF220-210ENST00000474394 SH3RF3Q8TEJ3 882 aaPredicted RBP13.06□□□□□ -0.32
RNF220-210ENST00000474394 WRNIP1Q96S55 665 aa13.06□□□□□ -0.32
RNF220-210ENST00000474394 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
RNF220-210ENST00000474394 DOCK2Q92608 1830 aa13.05□□□□□ -0.32
RNF220-210ENST00000474394 ZBTB48P10074 688 aaPredicted RBP13.05□□□□□ -0.32
RNF220-210ENST00000474394 SLC9C2Q5TAH2 1124 aa13.05□□□□□ -0.32
RNF220-210ENST00000474394 ANKRD45Q5TZF3 282 aa13.05□□□□□ -0.32
RNF220-210ENST00000474394 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.05□□□□□ -0.32
RNF220-210ENST00000474394 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
RNF220-210ENST00000474394 ELP3Q9H9T3 547 aa13.05□□□□□ -0.32
RNF220-210ENST00000474394 DDTLA6NHG4 134 aaPredicted RBP13.04□□□□□ -0.32
RNF220-210ENST00000474394 PDE6AP16499 860 aa13.04□□□□□ -0.32
RNF220-210ENST00000474394 DYNLL1P63167 89 aaKnown RBP13.04□□□□□ -0.32
RNF220-210ENST00000474394 SREBF2Q12772 1141 aa13.04□□□□□ -0.32
RNF220-210ENST00000474394 VGLL4Q14135 290 aa13.04□□□□□ -0.32
RNF220-210ENST00000474394 SH3BP5LQ7L8J4 393 aa13.04□□□□□ -0.32
RNF220-210ENST00000474394 MIGA1Q8NAN2 632 aa13.04□□□□□ -0.32
RNF220-210ENST00000474394 TGFBRAP1Q8WUH2 860 aa13.04□□□□□ -0.32
RNF220-210ENST00000474394 EDC3Q96F86 508 aaKnown RBP13.04□□□□□ -0.32
RNF220-210ENST00000474394 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
RNF220-210ENST00000474394 OSBPL5Q9H0X9 879 aaPredicted RBP13.04□□□□□ -0.32
RNF220-210ENST00000474394 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
RNF220-210ENST00000474394 RBBP6Q7Z6E9 1792 aaKnown RBP13.03□□□□□ -0.32
RNF220-210ENST00000474394 MANSC4A6NHS7 340 aaPredicted RBP13.03□□□□□ -0.32
RNF220-210ENST00000474394 ERC2O15083 957 aa13.03□□□□□ -0.32
RNF220-210ENST00000474394 FKTNO75072 461 aa13.03□□□□□ -0.32
RNF220-210ENST00000474394 TM4SF4P48230 202 aa13.03□□□□□ -0.32
RNF220-210ENST00000474394 OPTNQ96CV9 577 aa13.03□□□□□ -0.32
RNF220-210ENST00000474394 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
RNF220-210ENST00000474394 ZNF112Q9UJU3 913 aa13.03□□□□□ -0.32
RNF220-210ENST00000474394 TTC41PQ6P2S7 1318 aa13.03□□□□□ -0.32
RNF220-210ENST00000474394 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
RNF220-210ENST00000474394 COL2A1P02458 1487 aaPredicted RBP13.03□□□□□ -0.32
RNF220-210ENST00000474394 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.33
RNF220-210ENST00000474394 INPP5BP32019 993 aa13.02□□□□□ -0.33
RNF220-210ENST00000474394 USP5P45974 858 aa13.02□□□□□ -0.33
RNF220-210ENST00000474394 INHBEP58166 350 aa13.02□□□□□ -0.33
RNF220-210ENST00000474394 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
RNF220-210ENST00000474394 MAP3K10Q02779 954 aa13.02□□□□□ -0.33
RNF220-210ENST00000474394 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.33
RNF220-210ENST00000474394 ERO1BQ86YB8 467 aa13.02□□□□□ -0.33
RNF220-210ENST00000474394 MAPKAPK5Q8IW41 473 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms